Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00669
         (782 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...   120   1e-29
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...   107   1e-25
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    97   2e-22
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    90   2e-20
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   6.4  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score =  120 bits (290), Expect = 1e-29
 Identities = 52/91 (57%), Positives = 71/91 (78%)
 Frame = +2

Query: 509 ISSTSSDKVNATIRGNSFFGVRHGLETLSQLIVYDDIRNNLLIVRDVTIKDRPVYPYRGI 688
           ++ T+  ++NATI  ++ FG RHGLETL+QLI+YDD+R+ LL+  DV+I D P Y YRGI
Sbjct: 154 VAETADGRLNATIIADNVFGGRHGLETLNQLIIYDDLRDQLLMPNDVSITDEPAYQYRGI 213

Query: 689 LLDTARNFYSIESIKRTIDAMAAVNLNTFHW 781
            LDT+RNF +++ IKRT+D MAA  LN+FHW
Sbjct: 214 ALDTSRNFVTVDVIKRTLDGMAASKLNSFHW 244



 Score = 55.6 bits (128), Expect = 4e-10
 Identities = 20/43 (46%), Positives = 27/43 (62%)
 Frame = +1

Query: 127 WRWTCENNRCTKIRNEPENKEPVLSLEACKMFCDDYGLLWPKP 255
           WRW C++N C K    P+ +   LSL AC++FC +   LWPKP
Sbjct: 25  WRWECKSNYCQKAPITPDTEATGLSLPACRLFCSEAAALWPKP 67



 Score = 44.8 bits (101), Expect = 8e-07
 Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
 Frame = +3

Query: 255 TIETNLGNFLSKINMNTIDIQ-ITKQGKSDDLLTAAADRFKTLVSSSVPKGFSAKAAGKS 431
           T E ++G  L K+N+N+I+   +T +  +  ++  A  RF+  + + VP+       GK+
Sbjct: 68  TGEVHVGTTLVKVNINSINTGGLTFETAAHKIMAGATKRFRNQIEALVPRKLRLADGGKT 127

Query: 432 VTVYLVNDNPYIREFSLDMDESYEL 506
           + +     +P ++E +LD  ESY L
Sbjct: 128 LEINYKLIDPDLKELNLDTKESYAL 152


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score =  107 bits (256), Expect = 1e-25
 Identities = 47/86 (54%), Positives = 63/86 (73%), Gaps = 2/86 (2%)
 Frame = +2

Query: 530 KVNATIRGNSFFGVRHGLETLSQLIVYDDIRNN--LLIVRDVTIKDRPVYPYRGILLDTA 703
           ++ A I   +FFG RHGLETLSQLI +DD      L +++  T++D P++PYRGI+LDTA
Sbjct: 189 EIVANITAKTFFGARHGLETLSQLIWWDDYETKGALKVLKGATVQDNPIFPYRGIMLDTA 248

Query: 704 RNFYSIESIKRTIDAMAAVNLNTFHW 781
           RN+ S+ESI+R +D MAA  LN FHW
Sbjct: 249 RNYMSVESIRRVLDGMAANKLNVFHW 274



 Score = 41.5 bits (93), Expect = 7e-06
 Identities = 29/86 (33%), Positives = 36/86 (41%)
 Frame = +1

Query: 127 WRWTCENNRCTKIRNEPENKEPVLSLEACKMFCDDYGLLWPKPRSRQIWVTSSPRLI*TP 306
           W W C N RC   R   +   PV+SL  C M C     LWP+P      VT + R +   
Sbjct: 56  WTWQCINQRCE--RRHIKGAIPVVSLSTCSMLCGS-TQLWPQPTGP---VTLASRAV--- 106

Query: 307 STFRSPSKERATTSSQRLPTGLRHWF 384
            TF     E  T + +   T L H F
Sbjct: 107 -TFNHQQLELETDTPEPARTLLEHSF 131



 Score = 25.0 bits (52), Expect = 0.68
 Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 9/81 (11%)
 Frame = +1

Query: 181 NKEPVLSLEAC---KMFCDDYGL---LWPKPRSRQIWVTSSPRLI*TPSTFRSPSKERAT 342
           NK+ +L  EAC   + F D+  L   LWP+  +    V S P+L  T  T +     R  
Sbjct: 543 NKKQILGGEACLWSEQF-DETSLDTRLWPRAAAFAERVWSDPQLDVTSFTIQEDVYTRLN 601

Query: 343 TSSQRLPT---GLRHWFPVPC 396
           T   RL     G    +PV C
Sbjct: 602 THRDRLVARGLGAEAMWPVWC 622


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 96.7 bits (230), Expect = 2e-22
 Identities = 40/85 (47%), Positives = 59/85 (69%)
 Frame = +2

Query: 524 SDKVNATIRGNSFFGVRHGLETLSQLIVYDDIRNNLLIVRDVTIKDRPVYPYRGILLDTA 703
           SD +   +   +FFG RHGLETL+QLI +D++ N L I+  V I+D P +PYRG+++DTA
Sbjct: 167 SDSLAVRLSAANFFGARHGLETLNQLIWFDEVVNELRILHGVEIRDYPKFPYRGVMIDTA 226

Query: 704 RNFYSIESIKRTIDAMAAVNLNTFH 778
           RNF+ ++ I++ +D MA   LN  H
Sbjct: 227 RNFFPVDLIRKVVDGMAMAKLNVLH 251



 Score = 37.1 bits (82), Expect = 2e-04
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = +1

Query: 127 WRWTCENNRCTKIRNEPENKEPVLSLEACKMFCDDYGLLWPKP 255
           + W CEN +C K   E E      SL  C M C +   +WPKP
Sbjct: 44  YTWKCENQKCVKYLVEDEE----TSLATCNMLCSE-PAIWPKP 81


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 89.8 bits (213), Expect = 2e-20
 Identities = 43/92 (46%), Positives = 61/92 (66%), Gaps = 3/92 (3%)
 Frame = +2

Query: 515 STSSDKVNATIRGNSFFGVRHGLETLSQLI-VY--DDIRNNLLIVRDVTIKDRPVYPYRG 685
           +T+ +++   I   + FG RHGLETLSQL+ VY  +D    L++  + +I D P +P+RG
Sbjct: 160 TTTGNQIGVQISAPTIFGARHGLETLSQLMDVYPNNDGTKCLVVTDEASISDAPFFPHRG 219

Query: 686 ILLDTARNFYSIESIKRTIDAMAAVNLNTFHW 781
           +LLDTARNF ++  IK+ ID MAA  LN  HW
Sbjct: 220 LLLDTARNFLTVSKIKKHIDGMAASKLNVLHW 251



 Score = 45.6 bits (103), Expect = 5e-07
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
 Frame = +1

Query: 97  IPTAAEEHSLWRWTCENNR--CTKIRNE-PENKEPVLSLEACKMFCDDYGLLWPKPRS 261
           + +   +  +W W C  +   CT+I +    N +   +LE C++ C  YG LWP+P S
Sbjct: 20  VSSRKSDSGIWYWQCNTDEETCTRISSTVSRNTDTYPTLETCRLVCGKYGALWPQPTS 77


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 12/28 (42%), Positives = 13/28 (46%), Gaps = 3/28 (10%)
 Frame = +2

Query: 104  RQPKSTHCGD---GRAKTIDARRSGTSR 178
            RQP  TH G      A    + RSGT R
Sbjct: 920  RQPAETHAGSPCRNSASPASSDRSGTPR 947


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,402
Number of Sequences: 336
Number of extensions: 3930
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)