Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00668
         (789 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U12965-3|AAZ32811.1|  980|Caenorhabditis elegans Hypothetical pr...    30   1.6  
AF098997-2|AAC68722.2|  796|Caenorhabditis elegans Hypothetical ...    30   2.2  
AC006770-3|AAF60595.1|  508|Caenorhabditis elegans Hypothetical ...    30   2.2  
Z66495-4|CAA91271.1|  954|Caenorhabditis elegans Hypothetical pr...    29   3.8  
AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain, ...    29   3.8  
AF125462-3|AAT68888.1| 1144|Caenorhabditis elegans Heavy chain, ...    29   3.8  
Z78418-3|CAB01697.1|  932|Caenorhabditis elegans Hypothetical pr...    28   6.6  
Z70270-2|CAA94228.1|  445|Caenorhabditis elegans Hypothetical pr...    28   6.6  

>U12965-3|AAZ32811.1|  980|Caenorhabditis elegans Hypothetical
           protein F23F12.8 protein.
          Length = 980

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 13/53 (24%), Positives = 28/53 (52%)
 Frame = +1

Query: 376 EPRLETTDHMSLELEEKRRLDSRNRYHQKLQKIRQKDRLKRDAKMSTLSCT*P 534
           E R      + +  EE+ RLD+  R  + L++I++ ++ +++ +   L  T P
Sbjct: 572 EERRRIQQQIMIATEERSRLDAMEREREMLRQIKESEKQRKELERQELLATTP 624


>AF098997-2|AAC68722.2|  796|Caenorhabditis elegans Hypothetical
           protein T10D4.6 protein.
          Length = 796

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = +3

Query: 489 LEEGREDVDPELYVAQIFGMYGDAASMTMNLTGFNKMLEELDLHKLI-DGGQTTDSTAYF 665
           LE+G +D DP +   ++F    D   M   L    ++  EL+L  +  +  +  D   ++
Sbjct: 261 LEQGWKDCDPPINWEKVFLESEDLRKMFTQLLAQKRLCTELELRLITKNRSRIADLVTFY 320

Query: 666 HVQ 674
           H+Q
Sbjct: 321 HIQ 323


>AC006770-3|AAF60595.1|  508|Caenorhabditis elegans Hypothetical
           protein Y46B2A.1 protein.
          Length = 508

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 24/94 (25%), Positives = 38/94 (40%)
 Frame = +3

Query: 408 PRIRREKEAGFEKPLPSEAPEDQTEGSLEEGREDVDPELYVAQIFGMYGDAASMTMNLTG 587
           P+ R + +   +    SE  ED+ E    EG +D D +   AQI  + GDA       + 
Sbjct: 141 PQGRMQVQQREDPESSSEDDEDEAEDLPAEGSDDEDDDPQEAQIRRILGDAYLPRARYSS 200

Query: 588 FNKMLEELDLHKLIDGGQTTDSTAYFHVQTTKDE 689
                 E +    ID   T    AY +  + ++E
Sbjct: 201 SESEASESEDEPDIDPAVTDQLEAYTNPYSWREE 234


>Z66495-4|CAA91271.1|  954|Caenorhabditis elegans Hypothetical
           protein C36A4.5 protein.
          Length = 954

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 19/59 (32%), Positives = 30/59 (50%)
 Frame = +3

Query: 435 GFEKPLPSEAPEDQTEGSLEEGREDVDPELYVAQIFGMYGDAASMTMNLTGFNKMLEEL 611
           GFE+PL  +AP D  +G+L E  EDV   + ++        AA +T  +    ++  EL
Sbjct: 646 GFEEPLIPQAPRD--DGTLAEFNEDVSKLVDISMDTNSSEVAADLTKAVGEVTQLSAEL 702


>AF125462-4|AAD12859.1| 1219|Caenorhabditis elegans Heavy chain,
            unconventional myosinprotein 8, isoform a protein.
          Length = 1219

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 13/46 (28%), Positives = 28/46 (60%)
 Frame = +1

Query: 370  AYEPRLETTDHMSLELEEKRRLDSRNRYHQKLQKIRQKDRLKRDAK 507
            AYE  ++  D M  +L+++++ D      +K ++  +K+RL+ +AK
Sbjct: 922  AYEHYVKRVDSMIADLKKQQKSDELAEIERKRRESEEKERLEIEAK 967


>AF125462-3|AAT68888.1| 1144|Caenorhabditis elegans Heavy chain,
            unconventional myosinprotein 8, isoform b protein.
          Length = 1144

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 13/46 (28%), Positives = 28/46 (60%)
 Frame = +1

Query: 370  AYEPRLETTDHMSLELEEKRRLDSRNRYHQKLQKIRQKDRLKRDAK 507
            AYE  ++  D M  +L+++++ D      +K ++  +K+RL+ +AK
Sbjct: 922  AYEHYVKRVDSMIADLKKQQKSDELAEIERKRRESEEKERLEIEAK 967


>Z78418-3|CAB01697.1|  932|Caenorhabditis elegans Hypothetical
           protein F25D7.4 protein.
          Length = 932

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 14/26 (53%), Positives = 18/26 (69%)
 Frame = +3

Query: 435 GFEKPLPSEAPEDQTEGSLEEGREDV 512
           GFE+PL  +AP D  +G+L E  EDV
Sbjct: 624 GFEEPLIPQAPRD--DGTLAEFNEDV 647


>Z70270-2|CAA94228.1|  445|Caenorhabditis elegans Hypothetical
           protein C53D6.3 protein.
          Length = 445

 Score = 28.3 bits (60), Expect = 6.6
 Identities = 12/46 (26%), Positives = 24/46 (52%)
 Frame = +3

Query: 606 ELDLHKLIDGGQTTDSTAYFHVQTTKDEEVVSCVNSSELVTR*TRG 743
           ELD  +L+   +   S++Y H +T K  +  +C   ++++ R   G
Sbjct: 17  ELDYSELVHSAELVSSSSYIHHKTNKKPD--NCTRDTDIIDRLLNG 60


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,809,508
Number of Sequences: 27780
Number of extensions: 332860
Number of successful extensions: 1125
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1124
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)