Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00662
         (636 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   4.9  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   4.9  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   4.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   4.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.5  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    21   8.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.6  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    21   8.6  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 204 ALTNGKVLWPLLEER 160
           A   G V+WP++E+R
Sbjct: 236 AQATGFVVWPIIEQR 250


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 204 ALTNGKVLWPLLEER 160
           A   G V+WP++E+R
Sbjct: 236 AQATGFVVWPIIEQR 250


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 204 ALTNGKVLWPLLEER 160
           A   G V+WP++E+R
Sbjct: 236 AQATGFVVWPIIEQR 250


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -1

Query: 204 ALTNGKVLWPLLEER 160
           A   G V+WP++E+R
Sbjct: 236 AQATGFVVWPIIEQR 250


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 284  ASSESAPSDQPIYPD 328
            ASS  APS  P+ PD
Sbjct: 2288 ASSTMAPSTTPMVPD 2302


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 457 HQRGPIPSDPAQTQSP 504
           HQ+ PI   P Q Q P
Sbjct: 205 HQQPPIQQQPNQGQQP 220


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -1

Query: 528 CAFFFSTAW*LCLCRIGWYWASLV 457
           C ++F  A+ + LC   +Y+A ++
Sbjct: 99  CTYYFYYAFIILLCVYYFYYAFII 122


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = +1

Query: 457 HQRGPIPSDPAQTQSP 504
           HQ+ PI   P Q Q P
Sbjct: 207 HQQPPIQQQPNQGQQP 222


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,735
Number of Sequences: 336
Number of extensions: 2790
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)