Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00662
(636 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal prot... 109 4e-24
AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p pro... 109 4e-24
AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,... 109 4e-24
AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,... 109 4e-24
AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,... 109 4e-24
BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p pro... 38 0.011
AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar pr... 38 0.011
AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi p... 38 0.011
AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA... 38 0.011
AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA... 38 0.011
AY058343-1|AAL13572.1| 403|Drosophila melanogaster GH11867p pro... 37 0.026
AE014297-1960|AAN13634.1| 403|Drosophila melanogaster CG31344-P... 37 0.026
AY118345-1|AAM48374.1| 475|Drosophila melanogaster LP03545p pro... 31 1.3
AE014297-3240|AAF56068.1| 475|Drosophila melanogaster CG7031-PA... 31 1.3
>X82782-1|CAA58023.1| 271|Drosophila melanogaster ribosomal protein
L7a protein.
Length = 271
Score = 109 bits (261), Expect = 4e-24
Identities = 63/161 (39%), Positives = 81/161 (50%), Gaps = 1/161 (0%)
Frame = +1
Query: 157 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIASSARRLYFSVV*KCPLRSTNLPRHWT 336
N LFEKRPKNF IGQ +QP RDLSRFVRWPKYI ++ K P +
Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93
Query: 337 RLQ-LRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPIPSDPAQTQSPSCR 513
+ ++ F + + ++ S T +
Sbjct: 94 KTTAVKLFKLLEKYRPESALAKNVRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153
Query: 514 EEEGALVVIAHDVDPIELVLFLPALCRKMGVPYWHCQGKSR 636
+++ LVVIAHDVDP+ELVLFLPALCRKMGVPY +GK+R
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKAR 194
Score = 93.1 bits (221), Expect = 3e-19
Identities = 47/96 (48%), Positives = 60/96 (62%)
Frame = +3
Query: 222 LVQICKMAQVYRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXX 401
L + + + R+QRQKAVLQ+RLKVPPPI+QF+QTLDKTTA LFK+LEKYRPE+
Sbjct: 56 LSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKTTAVKLFKLLEKYRPESALAK 115
Query: 402 XXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKL 509
+P+ + +GTNTVTKL
Sbjct: 116 NVRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKL 151
>AY089570-1|AAL90308.1| 271|Drosophila melanogaster RE05022p
protein.
Length = 271
Score = 109 bits (261), Expect = 4e-24
Identities = 63/161 (39%), Positives = 81/161 (50%), Gaps = 1/161 (0%)
Frame = +1
Query: 157 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIASSARRLYFSVV*KCPLRSTNLPRHWT 336
N LFEKRPKNF IGQ +QP RDLSRFVRWPKYI ++ K P +
Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93
Query: 337 RLQ-LRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPIPSDPAQTQSPSCR 513
+ ++ F + + ++ S T +
Sbjct: 94 KTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153
Query: 514 EEEGALVVIAHDVDPIELVLFLPALCRKMGVPYWHCQGKSR 636
+++ LVVIAHDVDP+ELVLFLPALCRKMGVPY +GK+R
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKAR 194
Score = 93.1 bits (221), Expect = 3e-19
Identities = 47/96 (48%), Positives = 60/96 (62%)
Frame = +3
Query: 222 LVQICKMAQVYRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXX 401
L + + + R+QRQKAVLQ+RLKVPPPI+QF+QTLDKTTA LFK+LEKYRPE+
Sbjct: 56 LSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKTTAVKLFKLLEKYRPESPLAK 115
Query: 402 XXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKL 509
+P+ + +GTNTVTKL
Sbjct: 116 KLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKL 151
>AE014298-903|AAF46169.1| 271|Drosophila melanogaster CG3314-PD,
isoform D protein.
Length = 271
Score = 109 bits (261), Expect = 4e-24
Identities = 63/161 (39%), Positives = 81/161 (50%), Gaps = 1/161 (0%)
Frame = +1
Query: 157 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIASSARRLYFSVV*KCPLRSTNLPRHWT 336
N LFEKRPKNF IGQ +QP RDLSRFVRWPKYI ++ K P +
Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93
Query: 337 RLQ-LRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPIPSDPAQTQSPSCR 513
+ ++ F + + ++ S T +
Sbjct: 94 KTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153
Query: 514 EEEGALVVIAHDVDPIELVLFLPALCRKMGVPYWHCQGKSR 636
+++ LVVIAHDVDP+ELVLFLPALCRKMGVPY +GK+R
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKAR 194
Score = 93.1 bits (221), Expect = 3e-19
Identities = 47/96 (48%), Positives = 60/96 (62%)
Frame = +3
Query: 222 LVQICKMAQVYRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXX 401
L + + + R+QRQKAVLQ+RLKVPPPI+QF+QTLDKTTA LFK+LEKYRPE+
Sbjct: 56 LSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKTTAVKLFKLLEKYRPESPLAK 115
Query: 402 XXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKL 509
+P+ + +GTNTVTKL
Sbjct: 116 KLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKL 151
>AE014298-902|AAN09172.1| 271|Drosophila melanogaster CG3314-PC,
isoform C protein.
Length = 271
Score = 109 bits (261), Expect = 4e-24
Identities = 63/161 (39%), Positives = 81/161 (50%), Gaps = 1/161 (0%)
Frame = +1
Query: 157 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIASSARRLYFSVV*KCPLRSTNLPRHWT 336
N LFEKRPKNF IGQ +QP RDLSRFVRWPKYI ++ K P +
Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93
Query: 337 RLQ-LRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPIPSDPAQTQSPSCR 513
+ ++ F + + ++ S T +
Sbjct: 94 KTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153
Query: 514 EEEGALVVIAHDVDPIELVLFLPALCRKMGVPYWHCQGKSR 636
+++ LVVIAHDVDP+ELVLFLPALCRKMGVPY +GK+R
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKAR 194
Score = 93.1 bits (221), Expect = 3e-19
Identities = 47/96 (48%), Positives = 60/96 (62%)
Frame = +3
Query: 222 LVQICKMAQVYRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXX 401
L + + + R+QRQKAVLQ+RLKVPPPI+QF+QTLDKTTA LFK+LEKYRPE+
Sbjct: 56 LSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKTTAVKLFKLLEKYRPESPLAK 115
Query: 402 XXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKL 509
+P+ + +GTNTVTKL
Sbjct: 116 KLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKL 151
>AE014298-901|AAN09170.1| 271|Drosophila melanogaster CG3314-PA,
isoform A protein.
Length = 271
Score = 109 bits (261), Expect = 4e-24
Identities = 63/161 (39%), Positives = 81/161 (50%), Gaps = 1/161 (0%)
Frame = +1
Query: 157 NPLFEKRPKNFAIGQGIQPTRDLSRFVRWPKYIASSARRLYFSVV*KCPLRSTNLPRHWT 336
N LFEKRPKNF IGQ +QP RDLSRFVRWPKYI ++ K P +
Sbjct: 34 NQLFEKRPKNFGIGQNVQPKRDLSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLD 93
Query: 337 RLQ-LRAFSRFWRNTXXXXXXXXXXXXXXXXXXXXXXXMSLHQRGPIPSDPAQTQSPSCR 513
+ ++ F + + ++ S T +
Sbjct: 94 KTTAVKLFKLLEKYRPESPLAKKLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKLIE 153
Query: 514 EEEGALVVIAHDVDPIELVLFLPALCRKMGVPYWHCQGKSR 636
+++ LVVIAHDVDP+ELVLFLPALCRKMGVPY +GK+R
Sbjct: 154 QKKAQLVVIAHDVDPLELVLFLPALCRKMGVPYCIVKGKAR 194
Score = 93.1 bits (221), Expect = 3e-19
Identities = 47/96 (48%), Positives = 60/96 (62%)
Frame = +3
Query: 222 LVQICKMAQVYRIQRQKAVLQRRLKVPPPINQFTQTLDKTTAKGLFKILEKYRPETXXXX 401
L + + + R+QRQKAVLQ+RLKVPPPI+QF+QTLDKTTA LFK+LEKYRPE+
Sbjct: 56 LSRFVRWPKYIRVQRQKAVLQKRLKVPPPIHQFSQTLDKTTAVKLFKLLEKYRPESPLAK 115
Query: 402 XXXXXXXXXXXXXXXXXXXXXRPNTIRSGTNTVTKL 509
+P+ + +GTNTVTKL
Sbjct: 116 KLRLKKIAEAKAKGKDVEPKKKPSYVSAGTNTVTKL 151
>BT023752-1|AAZ41760.1| 160|Drosophila melanogaster RH66170p
protein.
Length = 160
Score = 37.9 bits (84), Expect = 0.011
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +1
Query: 511 REEEGALVVIAHDVDPIELVLFLPALCRKMGVPYWHCQGKS 633
R+ E + + A DV P++++ LPA+C + G+PY + ++
Sbjct: 79 RKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRA 119
>AF217228-1|AAF27630.1| 160|Drosophila melanogaster nucleolar
protein NHP2 protein.
Length = 160
Score = 37.9 bits (84), Expect = 0.011
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +1
Query: 511 REEEGALVVIAHDVDPIELVLFLPALCRKMGVPYWHCQGKS 633
R+ E + + A DV P++++ LPA+C + G+PY + ++
Sbjct: 79 RKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRA 119
>AF208396-1|AAF20209.1| 127|Drosophila melanogaster Hoi-polloi
protein.
Length = 127
Score = 37.9 bits (84), Expect = 0.011
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +1
Query: 529 LVVIAHDVDPIELVLFLPALCRKMGVPYWHCQGK 630
+VV+A D +PIE++L LP LC VPY + K
Sbjct: 52 IVVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSK 85
>AE014296-2434|AAF49701.1| 160|Drosophila melanogaster CG5258-PA
protein.
Length = 160
Score = 37.9 bits (84), Expect = 0.011
Identities = 13/41 (31%), Positives = 26/41 (63%)
Frame = +1
Query: 511 REEEGALVVIAHDVDPIELVLFLPALCRKMGVPYWHCQGKS 633
R+ E + + A DV P++++ LPA+C + G+PY + ++
Sbjct: 79 RKGETGICIFAGDVTPVDIMCHLPAVCEEKGIPYTYTPSRA 119
>AE014134-1677|AAF52798.2| 127|Drosophila melanogaster CG3949-PA
protein.
Length = 127
Score = 37.9 bits (84), Expect = 0.011
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +1
Query: 529 LVVIAHDVDPIELVLFLPALCRKMGVPYWHCQGK 630
+VV+A D +PIE++L LP LC VPY + K
Sbjct: 52 IVVLAGDAEPIEILLHLPLLCEDKNVPYVFVRSK 85
>AY058343-1|AAL13572.1| 403|Drosophila melanogaster GH11867p
protein.
Length = 403
Score = 36.7 bits (81), Expect = 0.026
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = -3
Query: 289 RR*STAFWRWMRYTWAIL--QIWTSHELAECPDQWQSSLASSRREDSRSSWA 140
R+ STAF + RY I Q W +H +A+ ++ +S+A+ RR SRSS A
Sbjct: 123 RQSSTAFTAYRRYVRTIFHTQAWYNHNIADRGSRFWTSIAAVRRAHSRSSHA 174
>AE014297-1960|AAN13634.1| 403|Drosophila melanogaster CG31344-PA
protein.
Length = 403
Score = 36.7 bits (81), Expect = 0.026
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = -3
Query: 289 RR*STAFWRWMRYTWAIL--QIWTSHELAECPDQWQSSLASSRREDSRSSWA 140
R+ STAF + RY I Q W +H +A+ ++ +S+A+ RR SRSS A
Sbjct: 123 RQSSTAFTAYRRYVRTIFHTQAWYNHNIADRGSRFWTSIAAVRRAHSRSSHA 174
>AY118345-1|AAM48374.1| 475|Drosophila melanogaster LP03545p
protein.
Length = 475
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +2
Query: 245 PSISHPAPEGCTSASSESAPSDQPIYPDTGQDYS 346
PSIS A +SASS S D +PD GQ+ S
Sbjct: 307 PSISGSAASSASSASSGSGADDFEEHPDAGQEQS 340
>AE014297-3240|AAF56068.1| 475|Drosophila melanogaster CG7031-PA
protein.
Length = 475
Score = 31.1 bits (67), Expect = 1.3
Identities = 16/34 (47%), Positives = 19/34 (55%)
Frame = +2
Query: 245 PSISHPAPEGCTSASSESAPSDQPIYPDTGQDYS 346
PSIS A +SASS S D +PD GQ+ S
Sbjct: 307 PSISGSAASSASSASSGSGADDFEEHPDAGQEQS 340
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,735,493
Number of Sequences: 53049
Number of extensions: 521647
Number of successful extensions: 1724
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1625
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1716
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2662347150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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