Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00659
         (734 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   2.4  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    24   5.6  
AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    24   5.6  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.0 bits (52), Expect = 2.4
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = -3

Query: 516 YVKKNFVSLFTKIARTEEYEISHTDREYREGVPNAN 409
           +V+KN   L  +++  +  E+ H D  +    PNAN
Sbjct: 35  FVRKNRALLIYQLSNKDYTEVFHEDDFFSLTTPNAN 70


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +1

Query: 217 HYRKILIKTNNILIYSQFDHRRQEQK 294
           H   +LI+ NN+L  +   H+ Q+Q+
Sbjct: 721 HPHDLLIEENNMLNMTHHQHQHQQQQ 746


>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = -1

Query: 506 KTLYPFLRKLRERRSMKFPTQIENIEK 426
           K L P+L +L +   MK PT + N+EK
Sbjct: 134 KGLAPYLAELEK---MKIPTVVANLEK 157


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 641,608
Number of Sequences: 2352
Number of extensions: 11759
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)