Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00658
         (529 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A...    25   1.6  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    25   2.1  
AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       23   4.8  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    23   6.3  
DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2 pro...    23   8.4  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   8.4  

>AF042732-3|AAC18058.1|  496|Anopheles gambiae diphenol oxidase-A2
           protein.
          Length = 496

 Score = 25.0 bits (52), Expect = 1.6
 Identities = 14/45 (31%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
 Frame = +3

Query: 360 PTNELDK--RVQLVTRLMERGCSCNSGKCSKLLKVKKVGEGRYNI 488
           P  E+D    + L+ RL+++     + KCS+ L  K VG+ R ++
Sbjct: 122 PVPEVDAYFHLLLLVRLLDKNDLPKATKCSQDLMAKVVGQNRRSL 166


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 24.6 bits (51), Expect = 2.1
 Identities = 11/18 (61%), Positives = 13/18 (72%)
 Frame = -2

Query: 345  RSQCCPPSPQTWCFRRRR 292
            RS+  PPSP+T   RRRR
Sbjct: 1112 RSRRLPPSPRTTEMRRRR 1129


>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 23.4 bits (48), Expect = 4.8
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +3

Query: 246 GPNPDPNESQESAVDNADAESTKSEGTVGST 338
           G NP   +   S   N    ST +EG  G+T
Sbjct: 431 GANPGTTQPPTSDAPNHTTTSTTTEGNPGTT 461


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 10/30 (33%), Positives = 16/30 (53%)
 Frame = +3

Query: 249 PNPDPNESQESAVDNADAESTKSEGTVGST 338
           P   P E  E++ D++  E   S+G  GS+
Sbjct: 221 PLASPEEESEASDDDSGTEGGSSQGGGGSS 250


>DQ219483-1|ABB29887.1|  961|Anopheles gambiae cryptochrome 2
           protein.
          Length = 961

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +1

Query: 346 MCRSNPPMNS 375
           MCRSNPP  S
Sbjct: 551 MCRSNPPAQS 560


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 5/60 (8%)
 Frame = +2

Query: 92  PSST*SRRGWYS*RTRSRWKSATPAST---RPCLALPG--SSETARPNPTKLWLKIRPQP 256
           PS      G  + R+ S  +S  P  T    P L  P   SS+  RP PT L     PQP
Sbjct: 29  PSKQAGGAGVRAERSISGTESTKPVPTVLGGPNLFAPSAVSSQLQRPQPTVLAASPAPQP 88


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 574,916
Number of Sequences: 2352
Number of extensions: 13347
Number of successful extensions: 29
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48628785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)