Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00658
(529 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein ... 23 1.5
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 22 4.5
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 4.5
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 4.5
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 21 5.9
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 21 5.9
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 21 5.9
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 21 7.8
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 21 7.8
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 7.8
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 21 7.8
>AJ276511-1|CAC06383.1| 352|Apis mellifera Antennapedia protein
protein.
Length = 352
Score = 23.4 bits (48), Expect = 1.5
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +3
Query: 303 ESTKSEGTVGSTDSDVPLKP 362
+ KS+GT GS D D + P
Sbjct: 327 KENKSKGTPGSGDGDTEISP 346
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 21.8 bits (44), Expect = 4.5
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 255 GWGRIFNQSFVGFGRAVSELPGSARHGRVEAGV 157
G+G I + FVG ++ LPG+ RVEA +
Sbjct: 383 GFG-IQSTDFVGDCSSLLNLPGNDARRRVEAAL 414
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.8 bits (44), Expect = 4.5
Identities = 9/43 (20%), Positives = 22/43 (51%)
Frame = +1
Query: 34 LHNQPRQVILCLLEVARLATKFNIEPPGLVQLENEIAMEERDS 162
+H RQV++ + R+A + PP +++ + + + +S
Sbjct: 212 MHRLTRQVVVSSVANVRIADHRGVMPPVILENSGVVHVAQDES 254
Score = 21.0 bits (42), Expect = 7.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -3
Query: 116 PGGSMLNLVASLATSNRQRITW 51
P G +NL A +S+ ITW
Sbjct: 1006 PAGPPINLEARALSSSEILITW 1027
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.8 bits (44), Expect = 4.5
Identities = 9/43 (20%), Positives = 22/43 (51%)
Frame = +1
Query: 34 LHNQPRQVILCLLEVARLATKFNIEPPGLVQLENEIAMEERDS 162
+H RQV++ + R+A + PP +++ + + + +S
Sbjct: 212 MHRLTRQVVVSSVANVRIADHRGVMPPVILENSGVVHVAQDES 254
Score = 21.0 bits (42), Expect = 7.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -3
Query: 116 PGGSMLNLVASLATSNRQRITW 51
P G +NL A +S+ ITW
Sbjct: 1002 PAGPPINLEARALSSSEILITW 1023
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 21.4 bits (43), Expect = 5.9
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = +2
Query: 248 PQPRSK*KPRVSGGQRRRRK 307
P PR R G+RRRR+
Sbjct: 394 PPPRQTPPSRKESGRRRRRR 413
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 21.4 bits (43), Expect = 5.9
Identities = 6/8 (75%), Positives = 7/8 (87%)
Frame = -2
Query: 351 AHRSQCCP 328
AH+ QCCP
Sbjct: 805 AHQDQCCP 812
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 21.4 bits (43), Expect = 5.9
Identities = 10/37 (27%), Positives = 17/37 (45%)
Frame = +3
Query: 255 PDPNESQESAVDNADAESTKSEGTVGSTDSDVPLKPT 365
PD + + + A+ + + E GSTD+ P T
Sbjct: 184 PDEIKVEVGEDEFANGGAARDESKAGSTDASTPATVT 220
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 21.0 bits (42), Expect = 7.8
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 166 LDSAMSSAAWQFRDS 210
LDS ++S W FR S
Sbjct: 275 LDSLVASRTWPFRPS 289
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 21.0 bits (42), Expect = 7.8
Identities = 7/19 (36%), Positives = 14/19 (73%)
Frame = +3
Query: 318 EGTVGSTDSDVPLKPTNEL 374
+G + DSD+P++PT+ +
Sbjct: 977 DGVSLNLDSDLPVEPTHPI 995
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.0 bits (42), Expect = 7.8
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = +1
Query: 292 TPTPKAPSLRGRWAALTPMCRSNPPMNSI 378
TPT S+ G +T + S+ +NSI
Sbjct: 841 TPTTSVISMSGTTVPITSLPASSTSINSI 869
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 21.0 bits (42), Expect = 7.8
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +1
Query: 277 SQRWTTPTPKAPSLRGRWAALTPMCR 354
S W T TP+A +L + + P R
Sbjct: 133 SPEWDTVTPEAKNLINQMLTVNPSKR 158
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,600
Number of Sequences: 438
Number of extensions: 3393
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14845611
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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