Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00657
(616 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 186 2e-48
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 185 4e-48
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 147 1e-36
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 129 3e-31
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 98 8e-22
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 33 0.033
SPBC16C6.05 |||translation initiation factor |Schizosaccharomyce... 30 0.23
SPCC663.03 |pmd1||leptomycin efflux transporter Pmd1|Schizosacch... 29 0.53
SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1 |Sc... 28 1.2
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po... 27 1.6
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 27 2.8
SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces po... 27 2.8
SPAC688.11 |end4|sla2|Huntingtin-interacting protein homolog|Sch... 26 5.0
SPAC1556.07 |pmm1||phosphomannomutase Pmm1|Schizosaccharomyces p... 25 6.6
SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces pom... 25 6.6
SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145 |Schizo... 25 6.6
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 6.6
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 25 6.6
SPCC126.03 |pus1|SPCC126.03, SPCC126.03|tRNA pseudouridylate syn... 25 6.6
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 25 8.7
SPAC4H3.10c |pyk1||pyruvate kinase |Schizosaccharomyces pombe|ch... 25 8.7
SPBC1652.01 |||conserved fungal protein|Schizosaccharomyces pomb... 25 8.7
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 186 bits (453), Expect = 2e-48
Identities = 92/133 (69%), Positives = 105/133 (78%)
Frame = +1
Query: 118 VMTTLIKRNTTIPTKQNQTFTTYSDNQPGVLIQVFEGERAMTKDNNCSVNSS*PGSHRRX 297
VMT LIKRNTTIPTK+++ F+TY+DNQPGVLIQVFEGERA TKD N G
Sbjct: 407 VMTPLIKRNTTIPTKKSEVFSTYADNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAP 466
Query: 298 DGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNE 477
GVPQIEVTFD+DANGILNVSA+EK T K KITITNDKGRLSKEEI+RMV+EAEKY+ E
Sbjct: 467 RGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVSEAEKYKAE 526
Query: 478 DDKQKETIQARMH 516
D+ + IQA+ H
Sbjct: 527 DEAETSRIQAKNH 539
Score = 40.7 bits (91), Expect = 2e-04
Identities = 34/97 (35%), Positives = 37/97 (38%)
Frame = +3
Query: 9 AAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGXCXXXXXXXXXXXXXXTESDIHHLL 188
AAVQAAIL GD SE+ QD GIETAG
Sbjct: 371 AAVQAAILVGDTSEKTQDLLLLDVAPLSLGIETAGGVMTPLIKRNTTIPTKKSEVFSTYA 430
Query: 189 **PTRSTHPSI*G*ACYDQR*QLLGKFELTGIPPAXR 299
G + LLGKFEL+GIPPA R
Sbjct: 431 DNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAPR 467
Score = 38.3 bits (85), Expect = 9e-04
Identities = 14/32 (43%), Positives = 25/32 (78%)
Frame = +3
Query: 507 QNALESYCFSMKSTMEDEKLKEKISDSDKQTI 602
+N LESY +S++++++D LK+K+ SDK+ I
Sbjct: 537 KNHLESYAYSLRNSLDDPNLKDKVDASDKEAI 568
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 185 bits (451), Expect = 4e-48
Identities = 93/133 (69%), Positives = 104/133 (78%)
Frame = +1
Query: 118 VMTTLIKRNTTIPTKQNQTFTTYSDNQPGVLIQVFEGERAMTKDNNCSVNSS*PGSHRRX 297
VMT LIKRNTTIPTK+++ F+TYSDNQPGVLIQVFEGERA TKD N G
Sbjct: 407 VMTPLIKRNTTIPTKKSEIFSTYSDNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAP 466
Query: 298 DGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNE 477
GVPQIEVTFD+DANGILNVSA+EK T K KITITNDKGRLSKEEI+RMV EAEKY+ E
Sbjct: 467 RGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVAEAEKYKAE 526
Query: 478 DDKQKETIQARMH 516
D+ + IQA+ H
Sbjct: 527 DEAESGRIQAKNH 539
Score = 40.3 bits (90), Expect = 2e-04
Identities = 33/97 (34%), Positives = 37/97 (38%)
Frame = +3
Query: 9 AAVQAAILHGDKSEEVQDXXXXXXXXXXXGIETAGXCXXXXXXXXXXXXXXTESDIHHLL 188
AAVQAA+L GD SE+ QD GIETAG
Sbjct: 371 AAVQAAVLTGDTSEKTQDLLLLDVAPLSMGIETAGGVMTPLIKRNTTIPTKKSEIFSTYS 430
Query: 189 **PTRSTHPSI*G*ACYDQR*QLLGKFELTGIPPAXR 299
G + LLGKFEL+GIPPA R
Sbjct: 431 DNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAPR 467
Score = 39.9 bits (89), Expect = 3e-04
Identities = 14/32 (43%), Positives = 26/32 (81%)
Frame = +3
Query: 507 QNALESYCFSMKSTMEDEKLKEKISDSDKQTI 602
+N LESY +S++++++D LK+K+ SDK+T+
Sbjct: 537 KNHLESYAYSLRNSLDDPNLKDKVDASDKETV 568
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 147 bits (357), Expect = 1e-36
Identities = 77/132 (58%), Positives = 94/132 (71%), Gaps = 1/132 (0%)
Frame = +1
Query: 118 VMTTLIKRNTTIPTKQNQTFTTYSDNQPGVLIQVFEGERAMTKDNNCSVNSS*PGSHRRX 297
VMT LI RNT IPT+++Q F+T DNQ VLIQV+EGER +TKDNN G
Sbjct: 436 VMTKLIGRNTPIPTRKSQIFSTAVDNQNTVLIQVYEGERTLTKDNNLLGKFDLRGIPPAP 495
Query: 298 DGVPQIEVTFDIDANGILNVSAIEKS-TNKENKITITNDKGRLSKEEIERMVNEAEKYRN 474
GVPQIEVTF++DANG+L VSA++KS K K+ I NDKGRLS+E+IERMV EAE++
Sbjct: 496 RGVPQIEVTFEVDANGVLTVSAVDKSGKGKPEKLVIKNDKGRLSEEDIERMVKEAEEFAE 555
Query: 475 EDDKQKETIQAR 510
ED KE I+AR
Sbjct: 556 EDKILKERIEAR 567
Score = 34.7 bits (76), Expect = 0.011
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Frame = +3
Query: 507 QNALESYCFSMKSTMED-EKLKEKISDSDKQTILD 608
+N LE+Y +S+K +D E+L K+ DKQ +LD
Sbjct: 567 RNTLENYAYSLKGQFDDDEQLGGKVDPEDKQAVLD 601
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 129 bits (312), Expect = 3e-31
Identities = 67/140 (47%), Positives = 90/140 (64%)
Frame = +1
Query: 85 PFPSVLRLLDXVMTTLIKRNTTIPTKQNQTFTTYSDNQPGVLIQVFEGERAMTKDNNCSV 264
P + L V T LI RNTTIPT+++Q F+T +D Q V I+VF+GER + +DN
Sbjct: 439 PLSLGIETLGGVFTRLINRNTTIPTRKSQVFSTAADGQTAVEIRVFQGERELVRDNKLIG 498
Query: 265 NSS*PGSHRRXDGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIER 444
N G G PQIEV+FD+DA+GI+NVSA +K+TNK++ IT+ G L+ EIE
Sbjct: 499 NFQLTGIAPAPKGQPQIEVSFDVDADGIINVSARDKATNKDSSITVAGSSG-LTDSEIEA 557
Query: 445 MVNEAEKYRNEDDKQKETIQ 504
MV +AEKYR D +KE I+
Sbjct: 558 MVADAEKYRASDMARKEAIE 577
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 98.3 bits (234), Expect = 8e-22
Identities = 49/131 (37%), Positives = 75/131 (57%)
Frame = +1
Query: 118 VMTTLIKRNTTIPTKQNQTFTTYSDNQPGVLIQVFEGERAMTKDNNCSVNSS*PGSHRRX 297
V + RNT IPT + +TFTT +DNQ V V++GER +N G
Sbjct: 412 VFGVVCPRNTPIPTIKKRTFTTVADNQTTVTFPVYQGERVNCAENEPLGEFQLTGIPPMP 471
Query: 298 DGVPQIEVTFDIDANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNE 477
G ++E TF++DANGIL V+A+EK+T + I ITN G LS +I+ M+ A+K++ +
Sbjct: 472 RGQAELEATFELDANGILKVTAVEKTTGRSAHIEITNSVGHLSSTKIQEMIENADKFKQQ 531
Query: 478 DDKQKETIQAR 510
D + ++A+
Sbjct: 532 DKDFAKKLEAK 542
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 33.1 bits (72), Expect = 0.033
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Frame = +1
Query: 178 TTYSDNQPGVLIQVFEGERAMTKDNNCSVNSS*PGSHRRXDGVPQIEVTFDIDANGILNV 357
T DN+ L + +GE T D+N +V SS + + V + D +A+ + V
Sbjct: 1164 TVEGDNKE--LRETMKGENVQT-DSNAAVPSSKSSTEEPNESVLSGHLDLDTEASPV--V 1218
Query: 358 SAIEKSTNKENKIT----ITNDKGRLSKEEIE 441
S IEK+T + +T N G+L K EIE
Sbjct: 1219 STIEKTTKGDVSVTEEQQSANIDGQLEKPEIE 1250
>SPBC16C6.05 |||translation initiation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 190
Score = 30.3 bits (65), Expect = 0.23
Identities = 16/53 (30%), Positives = 27/53 (50%)
Frame = +1
Query: 334 DANGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQK 492
D LNVS + S +E +T ++ R+ +EE +RM ++ E K+K
Sbjct: 58 DLENTLNVSGTKDSNAEEQPAKLTKEEKRVEREEAKRMASKVLIKTIERTKRK 110
>SPCC663.03 |pmd1||leptomycin efflux transporter
Pmd1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1362
Score = 29.1 bits (62), Expect = 0.53
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = +1
Query: 412 KGRLSKEEIERMVNEAEKYRNEDD 483
KG LSKEE+ER V +A K N D
Sbjct: 525 KGTLSKEELERRVYDAAKLANAYD 548
>SPBC16E9.13 |ksp1|ppk20|serine/threonine protein kinase Ksp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 474
Score = 27.9 bits (59), Expect = 1.2
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +1
Query: 349 LNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNED 480
L VS ++S K + + K EE+E VNE E++R D
Sbjct: 257 LCVSPEKRSLAKTREAVLAVTKWTTDDEELESFVNEEEEFRASD 300
>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 27.5 bits (58), Expect = 1.6
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +3
Query: 342 RYPQRFRYREVHQQGEQDHHYQRQRSS-LQGRDRAY 446
R P R +YRE H + + H R QGR +Y
Sbjct: 320 RDPDRTKYREYHSERRKQHRTDRYSDDYYQGRSYSY 355
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 26.6 bits (56), Expect = 2.8
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 379 NKENKITITNDKGRLSKEEIERMVNEAE 462
NK+ K T D SKEE+E +V E E
Sbjct: 529 NKKGKHTQIEDPTAASKEELENLVREDE 556
>SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1076
Score = 26.6 bits (56), Expect = 2.8
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +1
Query: 136 KRNTTIPTKQNQTFTTYSDNQPGVLIQVFE-GERAMTKDNNCSVNSS*PGSHRRXDGVPQ 312
+ +T P+ N F+T G + + GER TKD + SV S S D +P
Sbjct: 666 RHSTASPSTVNSGFSTPRSQATGFSKKKKDKGERFETKDKSSSVLSPSSYSASTFDAIPM 725
Query: 313 IEVTFDIDANGILNVSAIEKSTNK 384
+ +I ++++EKS +K
Sbjct: 726 DSIVSNI-------LASLEKSVHK 742
>SPAC688.11 |end4|sla2|Huntingtin-interacting protein
homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1092
Score = 25.8 bits (54), Expect = 5.0
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = -3
Query: 380 LVDFSIAETLRIPLASMSKVTSI*GTPSXRRWDPGQLEFTEQLLSLVIA 234
LVD +AET + ++ ++ +I P P +L+ + LLS IA
Sbjct: 859 LVDNQLAETAQAIQQAILRLQNIAAKPKDDSLSPSELQVHDSLLSASIA 907
>SPAC1556.07 |pmm1||phosphomannomutase Pmm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 257
Score = 25.4 bits (53), Expect = 6.6
Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +1
Query: 304 VPQIEVTFDIDANGILNVSAIEKSTNKENKITITN-DKGRLSKEEIERMVNEAEK 465
+P TF NG++N+S + ++ N E + DKGR + + ++ E K
Sbjct: 122 IPVKRGTFIEFRNGMINISPVGRNANTEERNEFERFDKGRKIRATMVDVLREKFK 176
>SPBC14F5.03c |kap123||karyopherin Kap123|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1067
Score = 25.4 bits (53), Expect = 6.6
Identities = 12/47 (25%), Positives = 26/47 (55%)
Frame = +1
Query: 355 VSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKE 495
V A+ KS +++ ++ G + EEI ++++ E E+D++ E
Sbjct: 597 VPALFKSIDQDESDILSERIGAPTAEEISQLLDSVETNEEENDEELE 643
>SPAC22F8.10c |sap145||U2 snRNP-associated protein Sap145
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 25.4 bits (53), Expect = 6.6
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +1
Query: 370 KSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDDKQKET 498
K NK+++ + +K +L +E+ AEK N DDK + T
Sbjct: 39 KQKNKKSRNQVRREKKKLLREKTNSGAKLAEK--NSDDKDQLT 79
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.4 bits (53), Expect = 6.6
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 340 NGILNVSAIEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNED 480
N + N S +KS+NKE + + RLS + + K ++ED
Sbjct: 409 NTVQNESKSQKSSNKEGRSSRGGFFSRLSFSRSSSRMKKGSKAKHED 455
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 25.4 bits (53), Expect = 6.6
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 143 TLPSPLNRIRHSPPTLITNPEYSSKYLR 226
T P R+RH+P I E KYLR
Sbjct: 43 TYGQPFKRLRHAPEKYIEFLELRLKYLR 70
>SPCC126.03 |pus1|SPCC126.03, SPCC126.03|tRNA pseudouridylate
synthase Lsp1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 534
Score = 25.4 bits (53), Expect = 6.6
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +3
Query: 489 KGDHPGQNALESYCFSMKSTMEDEKLKEKISD 584
KG H N + S+K MEDEKL EK+++
Sbjct: 104 KGVHAAGNVI-----SLKLIMEDEKLIEKVNE 130
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 25.0 bits (52), Expect = 8.7
Identities = 17/62 (27%), Positives = 30/62 (48%)
Frame = +1
Query: 139 RNTTIPTKQNQTFTTYSDNQPGVLIQVFEGERAMTKDNNCSVNSS*PGSHRRXDGVPQIE 318
R TT+ T Q + FT DN + + E+ + K++ S S+ +H R + +P +
Sbjct: 627 RKTTL-TDQTEEFTERRDNNGSIPSKQPSDEQHLGKESLPSQQST-VSNHHRKESIPSKQ 684
Query: 319 VT 324
T
Sbjct: 685 PT 686
>SPAC4H3.10c |pyk1||pyruvate kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 509
Score = 25.0 bits (52), Expect = 8.7
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +1
Query: 340 NGILNVSAIEKSTNKENKITITNDKGRLSKEE 435
+GIL+ + IEK +K K+ + N+ G++S ++
Sbjct: 154 DGILSFTVIEKVDDKNLKVRV-NNNGKISSKK 184
>SPBC1652.01 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 386
Score = 25.0 bits (52), Expect = 8.7
Identities = 14/58 (24%), Positives = 26/58 (44%)
Frame = +1
Query: 97 VLRLLDXVMTTLIKRNTTIPTKQNQTFTTYSDNQPGVLIQVFEGERAMTKDNNCSVNS 270
+ RLL + L N PT+Q + T +++ G+ + R + +D+ NS
Sbjct: 128 IRRLLHHLSLMLPSFNELTPTQQRRLLTRALESKKGIQFEKIGWGRWVLRDSTIPANS 185
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,222,607
Number of Sequences: 5004
Number of extensions: 40738
Number of successful extensions: 184
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 173
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 269634532
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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