SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00657
         (616 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          23   2.4  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    23   2.4  
AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex det...    22   4.1  
AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex det...    22   4.1  
AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex det...    22   4.1  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    22   4.1  
AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex det...    22   4.1  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    22   4.1  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   4.1  
AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex det...    22   5.5  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 185 TLITNPEYSSKYLR 226
           T I N  YSSKY+R
Sbjct: 199 TYIVNTNYSSKYMR 212


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = -2

Query: 210 EYSGLVIRVGGECLILFSGDGSVTLDECGHDTVQQSQYRG 91
           E+ G+   +G   + L SG+    LD  GH      ++RG
Sbjct: 174 EFGGITQCIGAFDVTLESGERVTFLDTPGHAAFISMRHRG 213


>AY569710-1|AAS86663.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 399 HYQRQRSSLQGRDRAY 446
           HY R+RS  + R+R Y
Sbjct: 230 HYSRERSCSRDRNREY 245


>AY569709-1|AAS86662.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 399 HYQRQRSSLQGRDRAY 446
           HY R+RS  + R+R Y
Sbjct: 230 HYSRERSCSRDRNREY 245


>AY569708-1|AAS86661.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 399 HYQRQRSSLQGRDRAY 446
           HY R+RS  + R+R Y
Sbjct: 230 HYSRERSCSRDRNREY 245


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 399 HYQRQRSSLQGRDRAY 446
           HY R+RS  + R+R Y
Sbjct: 230 HYSRERSCSRDRNREY 245


>AY569706-1|AAS86659.1|  397|Apis mellifera complementary sex
           determiner protein.
          Length = 397

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 399 HYQRQRSSLQGRDRAY 446
           HY R+RS  + R+R Y
Sbjct: 219 HYSRERSCSRDRNREY 234


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +3

Query: 399 HYQRQRSSLQGRDRAY 446
           HY R+RS  + R+R Y
Sbjct: 230 HYSRERSCSRDRNREY 245


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 11/49 (22%), Positives = 22/49 (44%)
 Frame = +3

Query: 285 PPAXRWRASN*GHLRHRCQRYPQRFRYREVHQQGEQDHHYQRQRSSLQG 431
           PP  +       H + + Q  PQ+ + ++  Q  +Q    Q+Q+   +G
Sbjct: 809 PPHQQLHHHQSTHPQAQAQAQPQQQQQQQQQQPQQQQQQQQQQQQQQRG 857



 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +2

Query: 140  VTLPSPLNRIRHSPP 184
            +T PSP  R R++PP
Sbjct: 986  MTDPSPFKRGRYTPP 1000


>AY569704-1|AAS86657.1|  426|Apis mellifera complementary sex
           determiner protein.
          Length = 426

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
 Frame = +3

Query: 339 QRYPQRFRYREVHQ-QGEQDHHYQRQRSSLQGRDR 440
           +RY  R R RE +  + E+++   R+RS  + RDR
Sbjct: 270 KRY-SRSREREQNSYKNEREYRKYRERSKERSRDR 303


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,940
Number of Sequences: 438
Number of extensions: 2960
Number of successful extensions: 12
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -