BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS00657 (616 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 23 2.4 AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 23 2.4 AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 4.1 AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 22 4.1 AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 4.1 AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 4.1 AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 4.1 AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 22 4.1 AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 22 4.1 AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 22 5.5 >EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. Length = 686 Score = 23.0 bits (47), Expect = 2.4 Identities = 9/14 (64%), Positives = 10/14 (71%) Frame = +2 Query: 185 TLITNPEYSSKYLR 226 T I N YSSKY+R Sbjct: 199 TYIVNTNYSSKYMR 212 >AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation factor 2 protein. Length = 690 Score = 23.0 bits (47), Expect = 2.4 Identities = 12/40 (30%), Positives = 19/40 (47%) Frame = -2 Query: 210 EYSGLVIRVGGECLILFSGDGSVTLDECGHDTVQQSQYRG 91 E+ G+ +G + L SG+ LD GH ++RG Sbjct: 174 EFGGITQCIGAFDVTLESGERVTFLDTPGHAAFISMRHRG 213 >AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 22.2 bits (45), Expect = 4.1 Identities = 8/16 (50%), Positives = 11/16 (68%) Frame = +3 Query: 399 HYQRQRSSLQGRDRAY 446 HY R+RS + R+R Y Sbjct: 230 HYSRERSCSRDRNREY 245 >AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 22.2 bits (45), Expect = 4.1 Identities = 8/16 (50%), Positives = 11/16 (68%) Frame = +3 Query: 399 HYQRQRSSLQGRDRAY 446 HY R+RS + R+R Y Sbjct: 230 HYSRERSCSRDRNREY 245 >AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 22.2 bits (45), Expect = 4.1 Identities = 8/16 (50%), Positives = 11/16 (68%) Frame = +3 Query: 399 HYQRQRSSLQGRDRAY 446 HY R+RS + R+R Y Sbjct: 230 HYSRERSCSRDRNREY 245 >AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex determiner protein. Length = 408 Score = 22.2 bits (45), Expect = 4.1 Identities = 8/16 (50%), Positives = 11/16 (68%) Frame = +3 Query: 399 HYQRQRSSLQGRDRAY 446 HY R+RS + R+R Y Sbjct: 230 HYSRERSCSRDRNREY 245 >AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex determiner protein. Length = 397 Score = 22.2 bits (45), Expect = 4.1 Identities = 8/16 (50%), Positives = 11/16 (68%) Frame = +3 Query: 399 HYQRQRSSLQGRDRAY 446 HY R+RS + R+R Y Sbjct: 219 HYSRERSCSRDRNREY 234 >AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex determiner protein. Length = 419 Score = 22.2 bits (45), Expect = 4.1 Identities = 8/16 (50%), Positives = 11/16 (68%) Frame = +3 Query: 399 HYQRQRSSLQGRDRAY 446 HY R+RS + R+R Y Sbjct: 230 HYSRERSCSRDRNREY 245 >AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. Length = 1598 Score = 22.2 bits (45), Expect = 4.1 Identities = 11/49 (22%), Positives = 22/49 (44%) Frame = +3 Query: 285 PPAXRWRASN*GHLRHRCQRYPQRFRYREVHQQGEQDHHYQRQRSSLQG 431 PP + H + + Q PQ+ + ++ Q +Q Q+Q+ +G Sbjct: 809 PPHQQLHHHQSTHPQAQAQAQPQQQQQQQQQQPQQQQQQQQQQQQQQRG 857 Score = 21.4 bits (43), Expect = 7.2 Identities = 8/15 (53%), Positives = 11/15 (73%) Frame = +2 Query: 140 VTLPSPLNRIRHSPP 184 +T PSP R R++PP Sbjct: 986 MTDPSPFKRGRYTPP 1000 >AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex determiner protein. Length = 426 Score = 21.8 bits (44), Expect = 5.5 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%) Frame = +3 Query: 339 QRYPQRFRYREVHQ-QGEQDHHYQRQRSSLQGRDR 440 +RY R R RE + + E+++ R+RS + RDR Sbjct: 270 KRY-SRSREREQNSYKNEREYRKYRERSKERSRDR 303 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 151,940 Number of Sequences: 438 Number of extensions: 2960 Number of successful extensions: 12 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 12 length of database: 146,343 effective HSP length: 55 effective length of database: 122,253 effective search space used: 18215697 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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