Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00654
         (758 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    25   3.3  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           25   3.3  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    24   4.4  

>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = -3

Query: 663 RI*GNFMRNMTSVTRGVRLFPRVCITTTVHNMIFFSF*DLNLMQ*LWFF 517
           RI     R   S T  +R +   C+ TT+H + +     L L +  +FF
Sbjct: 20  RIKAAISRERVSFTENLREY---CLNTTIHGLKYIGTVSLTLCERAYFF 65


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = +3

Query: 141 FSIELLNYTMSSLPIVSIIRRETFSSAHRLHSPFLSDERTK 263
           +++++LN   + L I++    +TFS  + LH+  LS  + K
Sbjct: 392 YTLQILNLRHNQLEIIAA---DTFSPMNNLHTLLLSHNKLK 429


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = -3

Query: 663 RI*GNFMRNMTSVTRGVRLFPRVCITTTVHNMIFFSF*DLNLMQ*LWFF 517
           RI     R   S T  +R +   C+ TT+H + +     L L +  +FF
Sbjct: 20  RIKAAINRERVSFTENLREY---CLNTTIHGLKYIGTVSLTLCERAYFF 65


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 750,791
Number of Sequences: 2352
Number of extensions: 14367
Number of successful extensions: 52
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78586767
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)