Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00652
         (635 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015A6C6B Cluster: UPI00015A6C6B related cluster; n...    50   5e-05
UniRef50_UPI0000E4A07B Cluster: PREDICTED: similar to transposas...    44   0.003
UniRef50_UPI00015B4C81 Cluster: PREDICTED: similar to polyprotei...    39   0.088
UniRef50_UPI0000E49205 Cluster: PREDICTED: similar to novel tran...    37   0.35 
UniRef50_Q5BSZ6 Cluster: SJCHGC03033 protein; n=1; Schistosoma j...    34   3.3  
UniRef50_Q9NX01 Cluster: Thioredoxin-like protein 4B; n=18; Eume...    33   4.4  
UniRef50_Q1PVZ6 Cluster: Similar to molybdopterin cofactor synth...    33   7.6  

>UniRef50_UPI00015A6C6B Cluster: UPI00015A6C6B related cluster; n=2;
            Danio rerio|Rep: UPI00015A6C6B UniRef100 entry - Danio
            rerio
          Length = 1026

 Score = 50.0 bits (114), Expect = 5e-05
 Identities = 30/81 (37%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
 Frame = +3

Query: 9    ELMLGREIRNRFSLLRPPPIEENMKNVVSKRKIGNRKTNL-VVGEKVMVRDYRKEAKPWV 185
            EL L R +R R+SLL+P     N+K+  S      RK  +  VG+KV+V++YR   K W 
Sbjct: 939  ELFLKRSVRTRWSLLKPQ-FSPNLKSEHSSMMTKPRKLRIFTVGQKVLVKNYR-GGKKWW 996

Query: 186  QGVVLAESVPGLTYMIDVEGQ 248
             G + ++ +  +TY++DV G+
Sbjct: 997  TGTI-SKVLGPVTYLVDVNGK 1016


>UniRef50_UPI0000E4A07B Cluster: PREDICTED: similar to transposase;
           n=4; Strongylocentrotus purpuratus|Rep: PREDICTED:
           similar to transposase - Strongylocentrotus purpuratus
          Length = 1203

 Score = 44.0 bits (99), Expect = 0.003
 Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
 Frame = +3

Query: 9   ELMLGREIRNRFSLLRPP-PIEENMKNVVSKRKIGNRKTNLVVGEKVMVRDYRKEAKPWV 185
           ++ +GR++R R S +RP   ++   K    K ++     +  VGE+V V D+R  ++ W 
Sbjct: 245 KMFMGRDLRTRLSQVRPDLGLKLQQKRAPKKERV----RSFEVGERVRVLDFRIHSERWS 300

Query: 186 QGVVLAESVPGLTYMIDVEGQTW 254
           +G+V     P +TY + V+G  W
Sbjct: 301 EGMVTRVLGP-VTYQVVVDGIRW 322


>UniRef50_UPI00015B4C81 Cluster: PREDICTED: similar to polyprotein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
           polyprotein - Nasonia vitripennis
          Length = 411

 Score = 39.1 bits (87), Expect = 0.088
 Identities = 24/62 (38%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = +3

Query: 15  MLGREIRNRFSLLRPPPIEENMKNVVSKRKIGNRKTNLVVGEKVMVRDYRKEAKP-WVQG 191
           M  RE+RNR  LLR    E N +  +   K G R+      + V VRDYR   KP W + 
Sbjct: 197 MFNRELRNRLDLLRRNENELNRERQIENYK-GKRELYFEPNDVVYVRDYRTPNKPKWAKA 255

Query: 192 VV 197
            V
Sbjct: 256 TV 257


>UniRef50_UPI0000E49205 Cluster: PREDICTED: similar to novel
           transposon; n=1; Strongylocentrotus purpuratus|Rep:
           PREDICTED: similar to novel transposon -
           Strongylocentrotus purpuratus
          Length = 188

 Score = 37.1 bits (82), Expect = 0.35
 Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 7/72 (9%)
 Frame = +3

Query: 12  LMLGREIRNRFSLLRPPPIEENMKNVVSKR---KIGNRKT----NLVVGEKVMVRDYRKE 170
           L++GR++R R   LR P IE   K+ + K+   +  NRK+      V G+KV+VR+Y  +
Sbjct: 111 LLMGRQLRMRLDNLR-PGIELRYKDQLYKQACHRNKNRKSVFTKEFVDGDKVLVRNYLSK 169

Query: 171 AKPWVQGVVLAE 206
            K WV G V+ +
Sbjct: 170 EK-WVPGTVVGK 180


>UniRef50_Q5BSZ6 Cluster: SJCHGC03033 protein; n=1; Schistosoma
           japonicum|Rep: SJCHGC03033 protein - Schistosoma
           japonicum (Blood fluke)
          Length = 179

 Score = 33.9 bits (74), Expect = 3.3
 Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
 Frame = +3

Query: 9   ELMLGREIRNRFSLLRPPPIEENMKNVVSKRKIGN---RKTNLVVGEKVMVRDYRKEAKP 179
           E+M GR +R  F ++ P    + +K  V+    GN   R  +  VG+ V   DYR     
Sbjct: 98  EIMFGRHMRTFFDIVHP---RDKVK--VTSNNGGNDYKRTRDFNVGDSVHACDYRPNRPK 152

Query: 180 WVQGVVLA 203
           W+ G ++A
Sbjct: 153 WINGTIVA 160


>UniRef50_Q9NX01 Cluster: Thioredoxin-like protein 4B; n=18;
           Eumetazoa|Rep: Thioredoxin-like protein 4B - Homo
           sapiens (Human)
          Length = 149

 Score = 33.5 bits (73), Expect = 4.4
 Identities = 14/51 (27%), Positives = 27/51 (52%)
 Frame = -1

Query: 482 LLGKTRRKLSKERDSYILELQVSSAFRNWFDISHSPQLIININAVSHRLQY 330
           +L KT   LSK    Y++++  ++ +  +FDIS+ P  +   N    ++ Y
Sbjct: 44  ILSKTSSDLSKMAAIYLVDVDQTAVYTQYFDISYIPSTVFFFNGQHMKVDY 94


>UniRef50_Q1PVZ6 Cluster: Similar to molybdopterin cofactor
           synthesis protein MoaA; n=1; Candidatus Kuenenia
           stuttgartiensis|Rep: Similar to molybdopterin cofactor
           synthesis protein MoaA - Candidatus Kuenenia
           stuttgartiensis
          Length = 339

 Score = 32.7 bits (71), Expect = 7.6
 Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = +3

Query: 66  IEENMKNVVSKRKIGNRKTNLVVGEKVMVRDYRKEAKPWVQGVVLAESVPGLTYMIDV-E 242
           +EEN+K +V+ +K    KT LVV + +   D + E KP++          G+   +++ E
Sbjct: 161 VEENVKRLVALKKKLQSKTPLVVVKIIQTPDTQNEIKPFI------HKWKGIADFVEIGE 214

Query: 243 GQTWNGT 263
              W+GT
Sbjct: 215 YHNWDGT 221


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 589,052,216
Number of Sequences: 1657284
Number of extensions: 11094661
Number of successful extensions: 22421
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 21805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22414
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47296372782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)