Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00652
         (635 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR457240-1|CAG33521.1|  149|Homo sapiens FLJ20511 protein.             33   0.64 
BC009646-1|AAH09646.1|  149|Homo sapiens thioredoxin-like 4B pro...    33   0.64 
AY566808-1|AAS68520.1|  149|Homo sapiens Dim1-like protein protein.    33   0.64 
AK000518-1|BAA91224.1|  149|Homo sapiens protein ( Homo sapiens ...    33   0.64 
AK222889-1|BAD96609.1|  149|Homo sapiens thioredoxin-like 4B var...    31   2.6  

>CR457240-1|CAG33521.1|  149|Homo sapiens FLJ20511 protein.
          Length = 149

 Score = 33.5 bits (73), Expect = 0.64
 Identities = 14/51 (27%), Positives = 27/51 (52%)
 Frame = -1

Query: 482 LLGKTRRKLSKERDSYILELQVSSAFRNWFDISHSPQLIININAVSHRLQY 330
           +L KT   LSK    Y++++  ++ +  +FDIS+ P  +   N    ++ Y
Sbjct: 44  ILSKTSSDLSKMAAIYLVDVDQTAVYTQYFDISYIPSTVFFFNGQHMKVDY 94


>BC009646-1|AAH09646.1|  149|Homo sapiens thioredoxin-like 4B
           protein.
          Length = 149

 Score = 33.5 bits (73), Expect = 0.64
 Identities = 14/51 (27%), Positives = 27/51 (52%)
 Frame = -1

Query: 482 LLGKTRRKLSKERDSYILELQVSSAFRNWFDISHSPQLIININAVSHRLQY 330
           +L KT   LSK    Y++++  ++ +  +FDIS+ P  +   N    ++ Y
Sbjct: 44  ILSKTSSDLSKMAAIYLVDVDQTAVYTQYFDISYIPSTVFFFNGQHMKVDY 94


>AY566808-1|AAS68520.1|  149|Homo sapiens Dim1-like protein protein.
          Length = 149

 Score = 33.5 bits (73), Expect = 0.64
 Identities = 14/51 (27%), Positives = 27/51 (52%)
 Frame = -1

Query: 482 LLGKTRRKLSKERDSYILELQVSSAFRNWFDISHSPQLIININAVSHRLQY 330
           +L KT   LSK    Y++++  ++ +  +FDIS+ P  +   N    ++ Y
Sbjct: 44  ILSKTSSDLSKMAAIYLVDVDQTAVYTQYFDISYIPSTVFFFNGQHMKVDY 94


>AK000518-1|BAA91224.1|  149|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20511 fis, clone KAT09708. ).
          Length = 149

 Score = 33.5 bits (73), Expect = 0.64
 Identities = 14/51 (27%), Positives = 27/51 (52%)
 Frame = -1

Query: 482 LLGKTRRKLSKERDSYILELQVSSAFRNWFDISHSPQLIININAVSHRLQY 330
           +L KT   LSK    Y++++  ++ +  +FDIS+ P  +   N    ++ Y
Sbjct: 44  ILSKTSSDLSKMAAIYLVDVDQTAVYTQYFDISYIPSTVFFFNGQHMKVDY 94


>AK222889-1|BAD96609.1|  149|Homo sapiens thioredoxin-like 4B
           variant protein.
          Length = 149

 Score = 31.5 bits (68), Expect = 2.6
 Identities = 13/51 (25%), Positives = 27/51 (52%)
 Frame = -1

Query: 482 LLGKTRRKLSKERDSYILELQVSSAFRNWFDISHSPQLIININAVSHRLQY 330
           +L KT   LSK    +++++  ++ +  +FDIS+ P  +   N    ++ Y
Sbjct: 44  ILSKTSSDLSKMAAIHLVDVDQTAVYTQYFDISYIPSTVFFFNGQHMKVDY 94


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,023,133
Number of Sequences: 237096
Number of extensions: 1730214
Number of successful extensions: 6285
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6285
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)