Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00650
(782 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 163 2e-40
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 143 1e-34
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 135 4e-32
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 123 2e-28
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 93 2e-19
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 81 8e-16
SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 75 5e-14
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 1e-12
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 47 1e-05
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 8e-05
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 38 0.007
SB_15460| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_56700| Best HMM Match : rve (HMM E-Value=1.1e-11) 32 0.46
SB_32372| Best HMM Match : rve (HMM E-Value=4.1e-19) 31 0.80
SB_24050| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.80
SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_45661| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_47478| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.8
SB_41386| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_19774| Best HMM Match : WWE (HMM E-Value=5.4e-24) 30 2.4
SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_16972| Best HMM Match : Ribosomal_60s (HMM E-Value=0.51) 30 2.4
SB_53811| Best HMM Match : Mab-21 (HMM E-Value=0.003) 29 3.2
SB_29315| Best HMM Match : Herpes_UL21 (HMM E-Value=0.75) 29 3.2
SB_47821| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_36890| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_29823| Best HMM Match : Metallothio (HMM E-Value=2.6) 29 4.2
SB_17360| Best HMM Match : 7tm_1 (HMM E-Value=1.8e-26) 29 4.2
SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.6
SB_44331| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_4086| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_58679| Best HMM Match : PX (HMM E-Value=0.93) 28 9.8
SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06) 28 9.8
SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.8
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 163 bits (395), Expect = 2e-40
Identities = 76/85 (89%), Positives = 81/85 (95%)
Frame = +1
Query: 253 SIAGLNVLRIINEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSLFEVKS 432
+IAGLNVLR+INEPTAAALAYGLDK+L GE+NVLIFDLGGGTFDVSILTID+GSLFEVKS
Sbjct: 163 TIAGLNVLRVINEPTAAALAYGLDKSLSGEKNVLIFDLGGGTFDVSILTIDDGSLFEVKS 222
Query: 433 TAGDTHLGGEDFDNRLVNHLAEEFK 507
TAGDTHLGGEDFDNRLVNH EFK
Sbjct: 223 TAGDTHLGGEDFDNRLVNHFVAEFK 247
Score = 133 bits (321), Expect = 2e-31
Identities = 62/80 (77%), Positives = 68/80 (85%)
Frame = +2
Query: 14 IQQDMKHWPFKVINDCGKPKIQIEFKGETKRFAPEEISSMVLTKMKETAEAYLGSTVRDA 193
+Q DMK WPFK+I+D KPKIQ+E+KGE K FA EEISSMVL KMKETAEAYLG V A
Sbjct: 83 VQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEISSMVLGKMKETAEAYLGQKVTSA 142
Query: 194 VVTVPAYFNDSQRQATKDAG 253
V+TVPAYFNDSQRQATKDAG
Sbjct: 143 VITVPAYFNDSQRQATKDAG 162
Score = 91.9 bits (218), Expect = 5e-19
Identities = 46/84 (54%), Positives = 55/84 (65%)
Frame = +3
Query: 510 KYKKDXXXXXXXXXXXXXXXXXXXXTLSSSTEATIEIDALYEGIDFYTRVSRARFEELNA 689
KYKKD TLSSSTEA+IE+D+L+EGIDFYT++SRARFE+L +
Sbjct: 249 KYKKDMSKNSRAMRRLRTACERAKRTLSSSTEASIEVDSLFEGIDFYTKISRARFEDLCS 308
Query: 690 DLFRGTLEPVEKALKDAKLDKSQI 761
DLF L+PV KAL DAK KS I
Sbjct: 309 DLFLSCLDPVNKALSDAKFSKSDI 332
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 143 bits (347), Expect = 1e-34
Identities = 66/90 (73%), Positives = 81/90 (90%)
Frame = +1
Query: 253 SIAGLNVLRIINEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSLFEVKS 432
+IAGLNVLRIINEPTAAA+AYGLDK + ERNVLI+DLGGGTFDVS+LTI++G +FEVKS
Sbjct: 163 TIAGLNVLRIINEPTAAAIAYGLDKKVGVERNVLIYDLGGGTFDVSVLTIEDG-IFEVKS 221
Query: 433 TAGDTHLGGEDFDNRLVNHLAEEFKPSTRR 522
TAGDTHLGGEDFDN++V+H ++FK ++
Sbjct: 222 TAGDTHLGGEDFDNKMVDHFVKQFKQKYKK 251
Score = 133 bits (321), Expect = 2e-31
Identities = 62/80 (77%), Positives = 69/80 (86%)
Frame = +2
Query: 14 IQQDMKHWPFKVINDCGKPKIQIEFKGETKRFAPEEISSMVLTKMKETAEAYLGSTVRDA 193
+ +DM HWPF VI + +PKIQ+EFKGE K F PEEISSMVLTKMKETAEAYLG+ V DA
Sbjct: 83 VARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEISSMVLTKMKETAEAYLGAKVTDA 142
Query: 194 VVTVPAYFNDSQRQATKDAG 253
VVTVPAYF+DSQRQATKDAG
Sbjct: 143 VVTVPAYFHDSQRQATKDAG 162
Score = 89.8 bits (213), Expect = 2e-18
Identities = 43/79 (54%), Positives = 55/79 (69%)
Frame = +3
Query: 510 KYKKDXXXXXXXXXXXXXXXXXXXXTLSSSTEATIEIDALYEGIDFYTRVSRARFEELNA 689
KYKKD TLSSST+A+IEID+L+EGIDFYT ++RARFEELN
Sbjct: 248 KYKKDITPNKRAMRRLRTACERAKRTLSSSTQASIEIDSLFEGIDFYTSITRARFEELNQ 307
Query: 690 DLFRGTLEPVEKALKDAKL 746
DLF+ T EPVE+A++D+K+
Sbjct: 308 DLFKKTTEPVEQAIRDSKI 326
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 135 bits (326), Expect = 4e-32
Identities = 63/89 (70%), Positives = 77/89 (86%)
Frame = +1
Query: 256 IAGLNVLRIINEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSLFEVKST 435
I+GLNVLRIINEPTAAA+AYGLDK + ERNVLIFDLGGGTFDVS+L+I++G +FEVKST
Sbjct: 257 ISGLNVLRIINEPTAAAIAYGLDKKVGQERNVLIFDLGGGTFDVSVLSIEDG-IFEVKST 315
Query: 436 AGDTHLGGEDFDNRLVNHLAEEFKPSTRR 522
GDTHLGGEDFDN +V+ ++FK ++
Sbjct: 316 HGDTHLGGEDFDNNMVDFFVKQFKQKYKK 344
Score = 121 bits (292), Expect = 6e-28
Identities = 57/79 (72%), Positives = 66/79 (83%)
Frame = +2
Query: 44 KVINDCGKPKIQIEFKGETKRFAPEEISSMVLTKMKETAEAYLGSTVRDAVVTVPAYFND 223
+V+N+ G+PK+++E+KGETK F EEISSMVL KMKETAEAYLG V DAVVTVPAYFND
Sbjct: 118 EVVNEAGRPKVKVEYKGETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFND 177
Query: 224 SQRQATKDAGASPA*TCFA 280
SQRQATKDAG S C+A
Sbjct: 178 SQRQATKDAGESVRGVCWA 196
Score = 95.9 bits (228), Expect = 3e-20
Identities = 46/83 (55%), Positives = 58/83 (69%)
Frame = +3
Query: 510 KYKKDXXXXXXXXXXXXXXXXXXXXTLSSSTEATIEIDALYEGIDFYTRVSRARFEELNA 689
KYKKD TLSSST+A+IEID+LY+GIDFYT ++RARFEE+NA
Sbjct: 341 KYKKDITPNKRALRRLRTACERAKRTLSSSTQASIEIDSLYDGIDFYTSITRARFEEMNA 400
Query: 690 DLFRGTLEPVEKALKDAKLDKSQ 758
LF+ TLEPVEKA+KD+KL+ +
Sbjct: 401 HLFKKTLEPVEKAIKDSKLESKE 423
Score = 82.6 bits (195), Expect = 3e-16
Identities = 40/45 (88%), Positives = 41/45 (91%)
Frame = +2
Query: 119 EISSMVLTKMKETAEAYLGSTVRDAVVTVPAYFNDSQRQATKDAG 253
+ISSMVL KMKETAEAYLG V DAVVTVPAYFNDSQRQATKDAG
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVPAYFNDSQRQATKDAG 255
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 123 bits (296), Expect = 2e-28
Identities = 57/85 (67%), Positives = 72/85 (84%)
Frame = +1
Query: 253 SIAGLNVLRIINEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSLFEVKS 432
+IAGL V+RIINEPTAAA+AYG+DK +GE+N+L+FDLGGGTFDVS+LTID G +FEV +
Sbjct: 861 AIAGLTVMRIINEPTAAAIAYGMDKK-EGEKNILVFDLGGGTFDVSLLTIDNG-VFEVVA 918
Query: 433 TAGDTHLGGEDFDNRLVNHLAEEFK 507
T GDTHLGGEDFD ++ H + +K
Sbjct: 919 TNGDTHLGGEDFDQNVMEHFIKLYK 943
Score = 118 bits (285), Expect = 4e-27
Identities = 56/83 (67%), Positives = 67/83 (80%)
Frame = +2
Query: 8 SKIQQDMKHWPFKVINDCGKPKIQIEFKGETKRFAPEEISSMVLTKMKETAEAYLGSTVR 187
+ +Q D+K +PFKV++ KP +Q++ K E K FA EEIS+MVLTKMKETAEAYLG V
Sbjct: 779 TSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAMVLTKMKETAEAYLGKKVT 838
Query: 188 DAVVTVPAYFNDSQRQATKDAGA 256
AVVTVPAYFND+QRQATKDAGA
Sbjct: 839 HAVVTVPAYFNDAQRQATKDAGA 861
Score = 69.7 bits (163), Expect = 2e-12
Identities = 32/58 (55%), Positives = 45/58 (77%)
Frame = +3
Query: 588 LSSSTEATIEIDALYEGIDFYTRVSRARFEELNADLFRGTLEPVEKALKDAKLDKSQI 761
LS+ +A +EI++ +EG DF ++RARFEELNA LF+ TL+PV+K L+DA L KS+I
Sbjct: 971 LSTQHQARVEIESFFEGEDFSEMLTRARFEELNAKLFKSTLKPVQKVLEDADLKKSEI 1028
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 93.1 bits (221), Expect = 2e-19
Identities = 45/82 (54%), Positives = 61/82 (74%)
Frame = +1
Query: 253 SIAGLNVLRIINEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVSILTIDEGSLFEVKS 432
S+AG+ VLR+INEPTAAALAYGL K +G NV++ DLGGGT DVS+L I +G +F +
Sbjct: 193 SLAGITVLRVINEPTAAALAYGLHKK-EGVANVMVVDLGGGTLDVSLLNI-QGGMFVTMA 250
Query: 433 TAGDTHLGGEDFDNRLVNHLAE 498
AG+ LGG+DF+ R + +L +
Sbjct: 251 MAGNNRLGGQDFNARFMQYLLQ 272
Score = 46.8 bits (106), Expect = 2e-05
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Frame = +2
Query: 29 KHWPFKVINDC-GKPKIQIEFKGETKRFAPEEISSMVLTKMKETAEAYLGSTVRDAVVTV 205
K + F+V D G + KG PEEI V+ K++ AE L +TV AV++V
Sbjct: 117 KLYQFRVTTDKRGNAGFLVGKKGNFTVITPEEIGGYVIKKLRTMAERNLTTTVTKAVMSV 176
Query: 206 PAYFNDSQRQATKDAGA 256
PA F+ QR AT A +
Sbjct: 177 PAEFDIKQRNATVKAAS 193
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 5/63 (7%)
Frame = +3
Query: 588 LSSSTEATIEI--DALYEG---IDFYTRVSRARFEELNADLFRGTLEPVEKALKDAKLDK 752
L+ + E TI++ +L EG + F +SR FE +N DLF+ L+P+ + L + +L K
Sbjct: 302 LTRTNEVTIKLMLPSLSEGKKIVKFKETISRKMFETINEDLFKKVLQPIRRVLAEVELPK 361
Query: 753 SQI 761
++
Sbjct: 362 EEV 364
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 81.4 bits (192), Expect = 8e-16
Identities = 37/60 (61%), Positives = 49/60 (81%)
Frame = +2
Query: 74 IQIEFKGETKRFAPEEISSMVLTKMKETAEAYLGSTVRDAVVTVPAYFNDSQRQATKDAG 253
I +E GE + FAPE+IS++VL ++K AEA+LG V+ AV+TVPA+FND+QRQATKDAG
Sbjct: 2 IAVEVCGEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVPAHFNDAQRQATKDAG 61
Score = 45.2 bits (102), Expect = 6e-05
Identities = 26/43 (60%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Frame = +1
Query: 226 PASGHQGRRSIAGLNVLRIINEPTAAALAYGLDK--NLKGERN 348
P S + RR VLRIINEPTAAA+AYGLDK K ERN
Sbjct: 77 PPSRFRRRRPHGRSRVLRIINEPTAAAIAYGLDKARGGKAERN 119
>SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 766
Score = 75.4 bits (177), Expect = 5e-14
Identities = 34/53 (64%), Positives = 43/53 (81%)
Frame = +1
Query: 349 VLIFDLGGGTFDVSILTIDEGSLFEVKSTAGDTHLGGEDFDNRLVNHLAEEFK 507
+ ++DLGGGTFD+SIL I +G +FEVK+T GDT+LGGEDFDN L+ L EFK
Sbjct: 2 IAVYDLGGGTFDISILEIQKG-VFEVKATNGDTYLGGEDFDNTLLKFLIAEFK 53
Score = 38.3 bits (85), Expect = 0.007
Identities = 16/36 (44%), Positives = 27/36 (75%)
Frame = +3
Query: 654 RVSRARFEELNADLFRGTLEPVEKALKDAKLDKSQI 761
++SR++FE L ADL T+ P +K L+DA+++K +I
Sbjct: 107 KLSRSKFESLVADLINRTVGPCKKCLQDAEINKGEI 142
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 70.5 bits (165), Expect = 1e-12
Identities = 40/86 (46%), Positives = 53/86 (61%), Gaps = 3/86 (3%)
Frame = +1
Query: 259 AGLNVLRIINEPTAAALAYGLDKN---LKGERNVLIFDLGGGTFDVSILTIDEGSLFEVK 429
AGLN LR++N+ TA +LAYG+ K RNV+ D+G + V I +G L +V
Sbjct: 222 AGLNCLRLMNDTTAVSLAYGIYKQDLPTDKPRNVVFVDIGHSSLQVCITAFLKGQL-KVL 280
Query: 430 STAGDTHLGGEDFDNRLVNHLAEEFK 507
STA + +LGG DFD LV H A+EFK
Sbjct: 281 STAVEPNLGGRDFDYVLVEHFAQEFK 306
Score = 70.1 bits (164), Expect = 2e-12
Identities = 31/88 (35%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Frame = +2
Query: 14 IQQDMKHWPFKVIN-DCGKPKIQIEFKGETKRFAPEEISSMVLTKMKETAEAYLGSTVRD 190
+Q+++ H P+KV+ IQ+++ G+ + F+PE++ +M+ T++K TAE L + V D
Sbjct: 139 VQKEIPHLPYKVVELPNDSIGIQVQYLGKQEVFSPEQVMAMLFTRLKTTAEIALKTKVTD 198
Query: 191 AVVTVPAYFNDSQRQATKDAGASPA*TC 274
V++VP+Y+ D QR+ DA A+ C
Sbjct: 199 CVISVPSYYTDRQRRCMLDASATAGLNC 226
Score = 37.1 bits (82), Expect = 0.016
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 2/61 (3%)
Frame = +3
Query: 591 SSSTEATIEIDALYEGIDFYTRVSRARFEELNADLFRGTLEPVEKAL-KDAKLD-KSQIP 764
++++E I I+ E D + R+ RA+FEEL ADL + P+ AL + K K+ +P
Sbjct: 336 ANTSEIPINIECFMEDKDVHGRMKRAQFEELAADLLKLVEAPLRSALAQSGKYSVKNVVP 395
Query: 765 T 767
T
Sbjct: 396 T 396
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/65 (38%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Frame = +1
Query: 316 GLDKNLKGERN-VLIFDLGGGTFDVSILTIDEGSLFEVKSTAGDTHLGGEDFDNRLVNHL 492
GL +N + + + VL++ LGG + DV++L++ G +++V +T D LGG +FD L++ L
Sbjct: 144 GLGQNDRSQDSTVLVYRLGGASHDVTLLSVING-MYKVLATEYDGALGGRNFDEVLLDLL 202
Query: 493 AEEFK 507
A +FK
Sbjct: 203 ANDFK 207
Score = 27.9 bits (59), Expect = 9.8
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +3
Query: 588 LSSSTEATIEIDALYEGIDFYTRVSR 665
LS+ A +D+L EGIDF +VSR
Sbjct: 240 LSTLESANCSVDSLCEGIDFQGQVSR 265
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 44.8 bits (101), Expect = 8e-05
Identities = 21/58 (36%), Positives = 34/58 (58%)
Frame = +3
Query: 588 LSSSTEATIEIDALYEGIDFYTRVSRARFEELNADLFRGTLEPVEKALKDAKLDKSQI 761
LS++ E +I+ +++G DF +V+R EE+ DLF PV +ALK A + + I
Sbjct: 258 LSANNEIFAQIEGVFDGKDFRVKVTREELEEMCQDLFDRVAGPVNRALKSASMTMNDI 315
Score = 43.6 bits (98), Expect = 2e-04
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 15/99 (15%)
Frame = +1
Query: 256 IAGLNVLRIINEPTAAALAYGL--DKNLKG--ERNVLIFDLGGGTFDVSIL------TID 405
+ GLNVL+I+N TA AL YGL K+ E++ + +D+G + +I+ T D
Sbjct: 130 LVGLNVLQIMNSNTAVALNYGLFQQKSFNDTLEKHFMFYDMGASSTVATIVGYSMTKTKD 189
Query: 406 EG-----SLFEVKSTAGDTHLGGEDFDNRLVNHLAEEFK 507
G +K D LGG D RL +HL + FK
Sbjct: 190 RGISETAPQLVIKGIGFDRTLGGHAIDMRLRDHLVQLFK 228
Score = 41.9 bits (94), Expect = 6e-04
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +2
Query: 107 FAPEEISSMVLTKMKETAEAYLGSTVRDAVVTVPAYFNDSQRQA 238
F PEE+ M+L + E + ++D V+TVP +FN ++R+A
Sbjct: 80 FTPEELMGMILNHSRFIGEQFADHPIKDVVLTVPPFFNQAERRA 123
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 38.3 bits (85), Expect = 0.007
Identities = 16/36 (44%), Positives = 27/36 (75%)
Frame = +3
Query: 654 RVSRARFEELNADLFRGTLEPVEKALKDAKLDKSQI 761
++SR++FE L ADL T+ P +K L+DA+++K +I
Sbjct: 52 KLSRSKFESLVADLINRTVGPCKKCLQDAEINKGEI 87
>SB_15460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 419
Score = 34.3 bits (75), Expect = 0.11
Identities = 25/76 (32%), Positives = 32/76 (42%)
Frame = -1
Query: 374 PPPRSKIRTFLSPLRFLSRPYASAAAVGSLMMRSTFRPAMLRRPWWPDAGSR*SMPEL*L 195
PPPR + PL RPY S + M F P M R P++ +A P+L
Sbjct: 224 PPPRDGVPVMPHPLGPGDRPYGSVPMAAASMDARHFVPTMPREPFFMEA----QRPQL-- 277
Query: 194 PHPALYFPDRLPPSPS 147
P FP + PP S
Sbjct: 278 -PPVGGFPGQAPPHMS 292
>SB_56700| Best HMM Match : rve (HMM E-Value=1.1e-11)
Length = 1140
Score = 32.3 bits (70), Expect = 0.46
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = -1
Query: 488 WLTSRLSKSSPPRCVSPAVDFTSNNDPSSIVRMDTSKVPPPRSKIRTFLS--PLR 330
W+T+ +S + P + P TS P + S+V PP S++R+ +S PLR
Sbjct: 265 WMTASISATDPIASLKPLSFATSCRTPPFSLNSCLSEVQPPLSRLRSCISVFPLR 319
>SB_32372| Best HMM Match : rve (HMM E-Value=4.1e-19)
Length = 1562
Score = 31.5 bits (68), Expect = 0.80
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = -1
Query: 488 WLTSRLSKSSPPRCVSPAVDFTSNNDPSSIVRMDTSKVPPPRSKIRTFLS--PLR 330
W+T+ +S + P + P TS P S + V PP S +RT +S PLR
Sbjct: 675 WMTASISATDPIASLKPLSFATSCRTPPSSLNSVHGLVQPPLSGLRTCISVFPLR 729
>SB_24050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1092
Score = 31.5 bits (68), Expect = 0.80
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = -1
Query: 581 LGALSGRAEASECARVQAQILLVLGLNSSARWLTSRLSKSSPPRCVSPAVDFTSNNDPSS 402
L +L RA + V +L L+S W T+ +S + P + P TS P
Sbjct: 538 LSSLRSRASWRRLSDVLGSSML---LDSVFSWTTASISATDPIASLKPFSFATSCRTPQF 594
Query: 401 IVRMDTSKVPPPRSKIRTFLS--PLR 330
+ + V PP S++R+ +S PLR
Sbjct: 595 SLNICLGLVQPPLSRLRSCISVFPLR 620
>SB_48634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 30.7 bits (66), Expect = 1.4
Identities = 21/83 (25%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Frame = +1
Query: 487 HLAEEFKPSTR-RICA*TLAHSDASARPLSAPRGHSHPAPRPPSRLTLCMRASTSTRESP 663
H +++K T + + +++ S P+S P HP+P P S + + S+ SP
Sbjct: 442 HFRKDYKELTAYQKTSNPISNPSISTSPISNPSPRPHPSPHPSSNPSPNPSPNPSSDPSP 501
Query: 664 APASRN*TRTCSGELWNPSRRHS 732
P+S + NPS S
Sbjct: 502 NPSSNPSSDPSPNPSSNPSSEPS 524
>SB_45661| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 189
Score = 30.7 bits (66), Expect = 1.4
Identities = 19/68 (27%), Positives = 30/68 (44%)
Frame = +1
Query: 7 EQDSAGHEALALQSNQRLRQTENTDRVQR*DETICARRN*QHGADKNEGDGGSLSGKYSA 186
E++S G E+ +S+ E +D + E + + G+D E DG G+ S
Sbjct: 76 EEESDGEESDGEESDGEESDGEESDGEESDGEESDGEESDEEGSDGEESDGEESDGEESD 135
Query: 187 GCGSHSSG 210
G GS G
Sbjct: 136 GKGSDEEG 143
Score = 29.5 bits (63), Expect = 3.2
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +1
Query: 10 QDSAGHEALALQSNQRLRQTENTDRVQR*DETICARRN*QHGADKNEGDGGSLSGKYSAG 189
++S G E+ +S++ E +D + E + + + G+D E DG G+ S G
Sbjct: 102 EESDGEESDGEESDEEGSDGEESDGEESDGEESDGKGSDEEGSDGEESDGEESDGEESDG 161
Query: 190 CGSHSSG 210
GS G
Sbjct: 162 EGSDGEG 168
>SB_47478| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 233
Score = 30.3 bits (65), Expect = 1.8
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 595 PAPRPPSRLTLCMRASTSTRESPAPASRN*TRTCSGELWNP 717
P P PP + TS++ SP+P +CSG LWNP
Sbjct: 131 PTPLPPHPVA----KDTSSKSSPSPYD---LPSCSGNLWNP 164
>SB_41386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 29.9 bits (64), Expect = 2.4
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 5/69 (7%)
Frame = +1
Query: 535 TLAHSDASARPLSAPRGHSHPAPR---PPSRLT--LCMRASTSTRESPAPASRN*TRTCS 699
T S + RP S PR S + P R T C RA T R +P P R +R +
Sbjct: 131 TSKESSKAKRPTSRPRPPSRLLTKRAWTPGRRTPFACRRAPTPGRRTPTPGRRASSRRKT 190
Query: 700 GELWNPSRR 726
+L +P R
Sbjct: 191 RDLNSPQAR 199
>SB_19774| Best HMM Match : WWE (HMM E-Value=5.4e-24)
Length = 729
Score = 29.9 bits (64), Expect = 2.4
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = -1
Query: 500 SSARWLTSRLSKSSPPRCVSPAVDFTSNNDPSSIVRMDTSKVPPPRSKIRTFL 342
SS+RW +++ S SS P P VD + N S +R+ TSK + KIR+++
Sbjct: 409 SSSRW-SAKASTSSLPADGLPRVDVNNTN---SALRVLTSKSSDNKEKIRSWI 457
>SB_2559| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1324
Score = 29.9 bits (64), Expect = 2.4
Identities = 24/77 (31%), Positives = 35/77 (45%)
Frame = -1
Query: 497 SARWLTSRLSKSSPPRCVSPAVDFTSNNDPSSIVRMDTSKVPPPRSKIRTFLSPLRFLSR 318
++ W+ + KS RC P TS+ SS TSK PP + + T +SP
Sbjct: 1243 TSSWMVTNCQKSCK-RC--PPEPPTSSIMQSSSNIPTTSKTPPSSTCLSTAVSPAAGADS 1299
Query: 317 PYASAAAVGSLMMRSTF 267
A A+ SL++ S F
Sbjct: 1300 NNAVNVAISSLVLPSLF 1316
>SB_16972| Best HMM Match : Ribosomal_60s (HMM E-Value=0.51)
Length = 1275
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = -1
Query: 488 WLTSRLSKSSPPRCVSPAVDFTSNNDPSSIVRMDTSKVPPPRSKIRTFLS--PLR 330
W+T+ +S + P + P TS P S + PP S++RT +S PLR
Sbjct: 433 WMTASISATDPIANLKPLSFATSCRTPPSSLNSCLGLDQPPLSRLRTCISVFPLR 487
>SB_53811| Best HMM Match : Mab-21 (HMM E-Value=0.003)
Length = 700
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 421 EVKSTAGDTHLGGEDFDNRLVNHLAEEFKPST 516
EVK T+GD + E DN + H+ E FK ++
Sbjct: 21 EVKITSGDKGMTKEMIDNHIKGHILEYFKDNS 52
>SB_29315| Best HMM Match : Herpes_UL21 (HMM E-Value=0.75)
Length = 814
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Frame = -1
Query: 488 WLTSRLSKSSPPRCVSPAVDFTSNNDPSSIVRMDTSKVPPPRSKIRTFLS--PLRF 327
W+T+ +S + P + P TS P + V PP S++R +S PLR+
Sbjct: 497 WMTASISATDPIASLKPFSFATSCRTPPFSLNSCLGLVQPPLSRLRCCISVFPLRY 552
>SB_47821| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 869
Score = 29.1 bits (62), Expect = 4.2
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 7/114 (6%)
Frame = +1
Query: 304 ALAYGLDKNLKGERNVLIFDLGGGTFDVSIL-------TIDEGSLFEVKSTAGDTHLGGE 462
+L GLD ++ G N + + G VS L T+ + +L++V T + +L
Sbjct: 617 SLRVGLDLSVSGHANNTVVNNVGRNL-VSRLKITFAGETLQDTNLYDVFKTYEELYLSKV 675
Query: 463 DFDNRLVNHLAEEFKPSTRRICA*TLAHSDASARPLSAPRGHSHPAPRPPSRLT 624
+ ++RL + E R + A SDA LSA G + P S LT
Sbjct: 676 EREDRLEQGIQSENMRKLRSMAG-DKATSDAKENALSAAHGARYTIPLDHSLLT 728
>SB_36890| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1881
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = -1
Query: 488 WLTSRLSKSSPPRCVSPAVDFTSNNDPSSIVRMDTSKVPPPRSKIRTFLS--PLR 330
W+T+ S + P + P TS P S + PP S++RT +S PLR
Sbjct: 632 WMTASTSVTDPIASLKPLSFATSCRTPPSSLNSCRGLDQPPLSRLRTCISVFPLR 686
>SB_29823| Best HMM Match : Metallothio (HMM E-Value=2.6)
Length = 812
Score = 29.1 bits (62), Expect = 4.2
Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 7/114 (6%)
Frame = +1
Query: 304 ALAYGLDKNLKGERNVLIFDLGGGTFDVSIL-------TIDEGSLFEVKSTAGDTHLGGE 462
+L GLD ++ G N + + G VS L T+ + +L++V T + +L
Sbjct: 560 SLRVGLDLSVSGHANNTVVNNVGRNL-VSRLKITFAGETLQDTNLYDVFKTYEELYLSKV 618
Query: 463 DFDNRLVNHLAEEFKPSTRRICA*TLAHSDASARPLSAPRGHSHPAPRPPSRLT 624
+ ++RL + E R + A SDA LSA G + P S LT
Sbjct: 619 EREDRLEQGIQSENMRKLRSMAG-DKATSDAKENALSAAHGARYTIPLDHSLLT 671
>SB_17360| Best HMM Match : 7tm_1 (HMM E-Value=1.8e-26)
Length = 715
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +1
Query: 361 DLGGGTFDVSILTIDEGSLFEVKSTAGDTHLGGEDF--DNRLVNHLAEEFKPST 516
D G+ + T+DE S F+ +S+ GD + + + D HLAE+ PS+
Sbjct: 600 DATRGSEESDYETVDENSCFDEESSGGDDDVFEQAYMEDAEREQHLAEDDTPSS 653
>SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2848
Score = 28.7 bits (61), Expect = 5.6
Identities = 19/70 (27%), Positives = 32/70 (45%)
Frame = +2
Query: 35 WPFKVINDCGKPKIQIEFKGETKRFAPEEISSMVLTKMKETAEAYLGSTVRDAVVTVPAY 214
+P K+I+DC + + T R + ++ +V T ETA VT PA+
Sbjct: 1303 FPLKIIDDCYDDILPSDGPDTTGRSSLFGVTPIVPTPTAETASKEPPKPAPRTKVTEPAH 1362
Query: 215 FNDSQRQATK 244
+DS+ T+
Sbjct: 1363 DSDSEATETE 1372
>SB_44331| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1916
Score = 28.3 bits (60), Expect = 7.4
Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Frame = -1
Query: 488 WLTSRLSKSSPPRCVSPAVDFTSNNDPSSIVRMDTSKVPPPRSKIRTFLS--PLR 330
W+T+ +S + P + P TS P S + PP S++R+ +S PLR
Sbjct: 769 WMTASISATDPIASLKPFSFATSCRTPPSSLNSCLGLDQPPLSRLRSRISVFPLR 823
>SB_4086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2235
Score = 28.3 bits (60), Expect = 7.4
Identities = 16/56 (28%), Positives = 26/56 (46%)
Frame = -1
Query: 506 LNSSARWLTSRLSKSSPPRCVSPAVDFTSNNDPSSIVRMDTSKVPPPRSKIRTFLS 339
++S W+T+ S + P + P TS P S + PP S++RT +S
Sbjct: 867 IHSVFSWMTASTSATDPIASLKPLRFATSCRTPPSSLNSCLGLDQPPLSRLRTRIS 922
>SB_58679| Best HMM Match : PX (HMM E-Value=0.93)
Length = 231
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/61 (24%), Positives = 29/61 (47%)
Frame = -2
Query: 199 DYRIPHCTSQIGFRRLLHFCQHHAANFFWRKSFRLTFELDLYFRFAAVVDYFEGPVLHVL 20
DY I T+ + F + L + ++F W + T E++ + R ++ D+ LH+
Sbjct: 65 DYEIYIQTNNMAFAKKLSNIRRRYSDFIWLRKQLTTNEVNGFGRVLSIRDFLSYSGLHLF 124
Query: 19 L 17
L
Sbjct: 125 L 125
>SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06)
Length = 1223
Score = 27.9 bits (59), Expect = 9.8
Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = +1
Query: 559 ARPLSAPRGHSHPAPRPPSRLTLCMRASTSTRE-SPAPASRN*TRTCSGELWNPSRRHS 732
A P ++PR +PR S + + S+R+ SP P+ R+ T S +L S R S
Sbjct: 328 ATPRASPRASPRASPRDQSSHSSPRNSRNSSRKSSPKPSPRSSRPTSSRKLSRKSSRKS 386
>SB_4090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2342
Score = 27.9 bits (59), Expect = 9.8
Identities = 16/56 (28%), Positives = 25/56 (44%)
Frame = -1
Query: 506 LNSSARWLTSRLSKSSPPRCVSPAVDFTSNNDPSSIVRMDTSKVPPPRSKIRTFLS 339
+ S W+T+ S + P + P TS P S + PP S++RT +S
Sbjct: 1230 IRSVFSWMTASTSATDPIASLKPLRFATSCRTPPSSLNSCLGLDQPPLSRLRTRIS 1285
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,236,907
Number of Sequences: 59808
Number of extensions: 480733
Number of successful extensions: 1901
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1882
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2143884611
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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