Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00647
         (731 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   2.5  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    22   4.4  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    22   5.9  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   7.8  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = -2

Query: 631 IIWSSNLISWPSM*SLLWRNLCLLYSW 551
           IIWSSNL   P +   L +   ++ SW
Sbjct: 453 IIWSSNLSKRPYIYKYLDKKNVVVQSW 479


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +1

Query: 178 KDEGQDEHNIRKQEEVLQESLMMVPDVK 261
           K +G+D+  + ++E VL  ++   PD +
Sbjct: 77  KIDGEDDSGLTEEEVVLSNAIAEGPDAE 104


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 12/50 (24%), Positives = 22/50 (44%)
 Frame = +3

Query: 525 KSRHQNKCHQEYNKHKFRHSKDYIDGHEIKFELQIICHLSHQHTSRPHPH 674
           + + +   H+ + +H   H  ++    E KF       L H H S+ +PH
Sbjct: 74  EQKQKEDVHKVF-QHLMIHRPNWWHELETKFNPHHEIKLQHLHQSKFNPH 122


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/23 (34%), Positives = 12/23 (52%)
 Frame = +3

Query: 93  DGRRETDCQGKSSLREGSRATEE 161
           +GRR  DC   SS+ +     E+
Sbjct: 23  EGRRVVDCDDVSSVSQSEAGDED 45


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 137,162
Number of Sequences: 336
Number of extensions: 2586
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)