Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00646
         (615 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol 1,4,...    33   0.21 
AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol 1,4,...    33   0.21 
AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol 1,4,...    33   0.21 
AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol 1,4,...    33   0.21 
AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol 1,4,...    33   0.21 
AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol trip...    33   0.21 
AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol trip...    33   0.21 
AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol trip...    33   0.21 
AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol trip...    33   0.21 
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr...    28   4.6  
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr...    28   4.6  

>AJ243182-1|CAB45863.1| 2857|Caenorhabditis elegans inositol
            1,4,5-trisphosphate receptorprotein.
          Length = 2857

 Score = 32.7 bits (71), Expect = 0.21
 Identities = 21/67 (31%), Positives = 32/67 (47%)
 Frame = -1

Query: 231  FIIYSSKP*VHYL*QKYYGKFCFHKNRMGSVRSSLFDTFSHIFVSLSNYFAGVLLFLTDL 52
            F ++SS    HYL    + K   HK  +  + S  F   S I V+L+ Y  G+L  +  +
Sbjct: 2450 FAVFSSFLLAHYL---RHDKIYLHKTSLLILASLCFLLLSSIGVTLTLYIFGILQLVNKI 2506

Query: 51   YHEVLFI 31
             H V F+
Sbjct: 2507 VHVVAFV 2513


>AJ243181-1|CAB45862.1| 2836|Caenorhabditis elegans inositol
            1,4,5-trisphosphate receptorprotein.
          Length = 2836

 Score = 32.7 bits (71), Expect = 0.21
 Identities = 21/67 (31%), Positives = 32/67 (47%)
 Frame = -1

Query: 231  FIIYSSKP*VHYL*QKYYGKFCFHKNRMGSVRSSLFDTFSHIFVSLSNYFAGVLLFLTDL 52
            F ++SS    HYL    + K   HK  +  + S  F   S I V+L+ Y  G+L  +  +
Sbjct: 2429 FAVFSSFLLAHYL---RHDKIYLHKTSLLILASLCFLLLSSIGVTLTLYIFGILQLVNKI 2485

Query: 51   YHEVLFI 31
             H V F+
Sbjct: 2486 VHVVAFV 2492


>AJ243180-1|CAB45861.1| 2892|Caenorhabditis elegans inositol
            1,4,5-trisphosphate receptorprotein.
          Length = 2892

 Score = 32.7 bits (71), Expect = 0.21
 Identities = 21/67 (31%), Positives = 32/67 (47%)
 Frame = -1

Query: 231  FIIYSSKP*VHYL*QKYYGKFCFHKNRMGSVRSSLFDTFSHIFVSLSNYFAGVLLFLTDL 52
            F ++SS    HYL    + K   HK  +  + S  F   S I V+L+ Y  G+L  +  +
Sbjct: 2485 FAVFSSFLLAHYL---RHDKIYLHKTSLLILASLCFLLLSSIGVTLTLYIFGILQLVNKI 2541

Query: 51   YHEVLFI 31
             H V F+
Sbjct: 2542 VHVVAFV 2548


>AJ243179-1|CAB45860.1| 2846|Caenorhabditis elegans inositol
            1,4,5-trisphosphate receptorprotein.
          Length = 2846

 Score = 32.7 bits (71), Expect = 0.21
 Identities = 21/67 (31%), Positives = 32/67 (47%)
 Frame = -1

Query: 231  FIIYSSKP*VHYL*QKYYGKFCFHKNRMGSVRSSLFDTFSHIFVSLSNYFAGVLLFLTDL 52
            F ++SS    HYL    + K   HK  +  + S  F   S I V+L+ Y  G+L  +  +
Sbjct: 2439 FAVFSSFLLAHYL---RHDKIYLHKTSLLILASLCFLLLSSIGVTLTLYIFGILQLVNKI 2495

Query: 51   YHEVLFI 31
             H V F+
Sbjct: 2496 VHVVAFV 2502


>AF168688-1|AAF05302.1| 2846|Caenorhabditis elegans inositol
            1,4,5-trisphosphate receptorprotein.
          Length = 2846

 Score = 32.7 bits (71), Expect = 0.21
 Identities = 21/67 (31%), Positives = 32/67 (47%)
 Frame = -1

Query: 231  FIIYSSKP*VHYL*QKYYGKFCFHKNRMGSVRSSLFDTFSHIFVSLSNYFAGVLLFLTDL 52
            F ++SS    HYL    + K   HK  +  + S  F   S I V+L+ Y  G+L  +  +
Sbjct: 2439 FAVFSSFLLAHYL---RHDKIYLHKTSLLILASLCFLLLSSIGVTLTLYIFGILQLVNKI 2495

Query: 51   YHEVLFI 31
             H V F+
Sbjct: 2496 VHVVAFV 2502


>AF036702-4|AAK68365.1| 2857|Caenorhabditis elegans Inositol
            triphosphate receptorprotein 1, isoform e protein.
          Length = 2857

 Score = 32.7 bits (71), Expect = 0.21
 Identities = 21/67 (31%), Positives = 32/67 (47%)
 Frame = -1

Query: 231  FIIYSSKP*VHYL*QKYYGKFCFHKNRMGSVRSSLFDTFSHIFVSLSNYFAGVLLFLTDL 52
            F ++SS    HYL    + K   HK  +  + S  F   S I V+L+ Y  G+L  +  +
Sbjct: 2450 FAVFSSFLLAHYL---RHDKIYLHKTSLLILASLCFLLLSSIGVTLTLYIFGILQLVNKI 2506

Query: 51   YHEVLFI 31
             H V F+
Sbjct: 2507 VHVVAFV 2513


>AF036702-3|AAK68366.1| 2846|Caenorhabditis elegans Inositol
            triphosphate receptorprotein 1, isoform f protein.
          Length = 2846

 Score = 32.7 bits (71), Expect = 0.21
 Identities = 21/67 (31%), Positives = 32/67 (47%)
 Frame = -1

Query: 231  FIIYSSKP*VHYL*QKYYGKFCFHKNRMGSVRSSLFDTFSHIFVSLSNYFAGVLLFLTDL 52
            F ++SS    HYL    + K   HK  +  + S  F   S I V+L+ Y  G+L  +  +
Sbjct: 2439 FAVFSSFLLAHYL---RHDKIYLHKTSLLILASLCFLLLSSIGVTLTLYIFGILQLVNKI 2495

Query: 51   YHEVLFI 31
             H V F+
Sbjct: 2496 VHVVAFV 2502


>AF036702-2|AAW30669.1| 2836|Caenorhabditis elegans Inositol
            triphosphate receptorprotein 1, isoform d protein.
          Length = 2836

 Score = 32.7 bits (71), Expect = 0.21
 Identities = 21/67 (31%), Positives = 32/67 (47%)
 Frame = -1

Query: 231  FIIYSSKP*VHYL*QKYYGKFCFHKNRMGSVRSSLFDTFSHIFVSLSNYFAGVLLFLTDL 52
            F ++SS    HYL    + K   HK  +  + S  F   S I V+L+ Y  G+L  +  +
Sbjct: 2429 FAVFSSFLLAHYL---RHDKIYLHKTSLLILASLCFLLLSSIGVTLTLYIFGILQLVNKI 2485

Query: 51   YHEVLFI 31
             H V F+
Sbjct: 2486 VHVVAFV 2492


>AF036702-1|AAW30668.1| 2892|Caenorhabditis elegans Inositol
            triphosphate receptorprotein 1, isoform a protein.
          Length = 2892

 Score = 32.7 bits (71), Expect = 0.21
 Identities = 21/67 (31%), Positives = 32/67 (47%)
 Frame = -1

Query: 231  FIIYSSKP*VHYL*QKYYGKFCFHKNRMGSVRSSLFDTFSHIFVSLSNYFAGVLLFLTDL 52
            F ++SS    HYL    + K   HK  +  + S  F   S I V+L+ Y  G+L  +  +
Sbjct: 2485 FAVFSSFLLAHYL---RHDKIYLHKTSLLILASLCFLLLSSIGVTLTLYIFGILQLVNKI 2541

Query: 51   YHEVLFI 31
             H V F+
Sbjct: 2542 VHVVAFV 2548


>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical
           protein T04F3.1 protein.
          Length = 3517

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = -2

Query: 614 SSKILFLLCTQI*TKFYHLKFRLHISNILIFYKSA*NKEYRSYPNKVISASQA 456
           S K + +LC    +KFY  K    IS I+  +K    K+  S P K+   S A
Sbjct: 629 SKKTVIILCHFRFSKFYIYKMVFDISKIVKIFKRKKKKKDPSSPTKIARPSFA 681


>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical
           protein T04F3.1 protein.
          Length = 3517

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = -2

Query: 614 SSKILFLLCTQI*TKFYHLKFRLHISNILIFYKSA*NKEYRSYPNKVISASQA 456
           S K + +LC    +KFY  K    IS I+  +K    K+  S P K+   S A
Sbjct: 629 SKKTVIILCHFRFSKFYIYKMVFDISKIVKIFKRKKKKKDPSSPTKIARPSFA 681


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,819,028
Number of Sequences: 27780
Number of extensions: 185598
Number of successful extensions: 353
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 353
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)