Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00645
         (553 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   2.3  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   3.1  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   9.5  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   9.5  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    21   9.5  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   9.5  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +1

Query: 394 KIRLEMHMEQVFLDTVDAYVWIYDPKPW 477
           +I+ E+++     DT+  +VWI+   PW
Sbjct: 524 RIQAEVNIWNPLTDTIPIHVWIH---PW 548


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = -3

Query: 113 LCTCEILPRGDLEILSSSLVHS 48
           +C+  +L R  +  L++SL+HS
Sbjct: 180 ICSYTVLIRNKISNLNTSLIHS 201


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -3

Query: 227 LWKSLCKASMQVMSHFDS 174
           L+ + CKA  +V+ ++DS
Sbjct: 15  LFAAYCKAESKVVCYYDS 32


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = -1

Query: 523 TVIVPRRPESHRPSSTKASGRRSRRKHRPYPKKLAP 416
           T+    RPE  RP ST ++      +  P P +  P
Sbjct: 403 TISTTPRPEWARPPSTPSADGSKPVQTTPKPGQWVP 438


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/33 (24%), Positives = 16/33 (48%)
 Frame = +1

Query: 1   RHEQRAKSTHREMAQSECTNEEDKISKSPRGNI 99
           +HE+  +++     Q      E ++  SP GN+
Sbjct: 111 QHERGPRNSTLRRQQMSSYYNESRVMMSPPGNV 143


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/33 (24%), Positives = 16/33 (48%)
 Frame = +1

Query: 1   RHEQRAKSTHREMAQSECTNEEDKISKSPRGNI 99
           +HE+  +++     Q      E ++  SP GN+
Sbjct: 111 QHERGPRNSTLRRQQMSSYYNESRVMMSPPGNV 143


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,323
Number of Sequences: 336
Number of extensions: 2147
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)