Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00645
         (553 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z38100-1|CAA86222.1|  402|Drosophila melanogaster Drosophila tra...    66   4e-11
BT003520-1|AAO39524.1|  415|Drosophila melanogaster RE23984p pro...    66   4e-11
AE014134-1753|AAF52848.1|  428|Drosophila melanogaster CG4758-PB...    66   4e-11
AE014134-1752|AAF52847.1|  415|Drosophila melanogaster CG4758-PA...    66   4e-11
AY084174-1|AAL89912.1|  249|Drosophila melanogaster RE42193p pro...    31   1.0  
AE014297-243|AAF52034.1|  249|Drosophila melanogaster CG1172-PA ...    31   1.0  
AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin pro...    29   5.5  
AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC...    29   5.5  
AY118676-1|AAM50536.1|  990|Drosophila melanogaster AT06247p pro...    28   9.7  
AE014298-3062|AAN09522.1|  764|Drosophila melanogaster CG11227-P...    28   9.7  
AE014298-3061|AAF50874.1|  753|Drosophila melanogaster CG11227-P...    28   9.7  

>Z38100-1|CAA86222.1|  402|Drosophila melanogaster Drosophila
           translocation protein 1 protein.
          Length = 402

 Score = 65.7 bits (153), Expect = 4e-11
 Identities = 25/41 (60%), Positives = 34/41 (82%)
 Frame = +1

Query: 391 RKIRLEMHMEQVFLDTVDAYVWIYDPKPWYYWVCGILVVLG 513
           RKIRL+MH EQ+F+D  +AYVWIYDP P +YW+ G +++LG
Sbjct: 167 RKIRLDMHPEQIFVDGSEAYVWIYDPIPLHYWIFGFILLLG 207



 Score = 45.6 bits (103), Expect = 5e-05
 Identities = 19/34 (55%), Positives = 25/34 (73%)
 Frame = +3

Query: 96  YFTGTKAVDALLTSKWATGKNPAFTTRIEVTHYL 197
           YFT +KA+DAL+ SK+  G NP FTTR +V  +L
Sbjct: 54  YFTSSKAIDALMKSKFTEGSNPLFTTREQVIEFL 87



 Score = 41.1 bits (92), Expect = 0.001
 Identities = 20/37 (54%), Positives = 23/37 (62%)
 Frame = +2

Query: 29  IAKWLKANVPTKKTKFLNHHVVIFHRYKGCRCLVDFK 139
           +AKWLK NV TKKTKFL+H V  F   K    L+  K
Sbjct: 32  VAKWLKKNVKTKKTKFLSHIVEYFTSSKAIDALMKSK 68



 Score = 29.1 bits (62), Expect = 4.2
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = +1

Query: 211 HKLFHRAKKVPVS 249
           HK FHRAKKVPV+
Sbjct: 93  HKFFHRAKKVPVT 105


>BT003520-1|AAO39524.1|  415|Drosophila melanogaster RE23984p
           protein.
          Length = 415

 Score = 65.7 bits (153), Expect = 4e-11
 Identities = 25/41 (60%), Positives = 34/41 (82%)
 Frame = +1

Query: 391 RKIRLEMHMEQVFLDTVDAYVWIYDPKPWYYWVCGILVVLG 513
           RKIRL+MH EQ+F+D  +AYVWIYDP P +YW+ G +++LG
Sbjct: 167 RKIRLDMHPEQIFVDGSEAYVWIYDPIPLHYWIFGFILLLG 207



 Score = 46.4 bits (105), Expect = 3e-05
 Identities = 20/34 (58%), Positives = 25/34 (73%)
 Frame = +3

Query: 96  YFTGTKAVDALLTSKWATGKNPAFTTRIEVTHYL 197
           YFT +KA+DALL SK+  G NP FTTR +V  +L
Sbjct: 54  YFTSSKAIDALLKSKFTEGSNPLFTTREQVIEFL 87



 Score = 41.1 bits (92), Expect = 0.001
 Identities = 20/37 (54%), Positives = 23/37 (62%)
 Frame = +2

Query: 29  IAKWLKANVPTKKTKFLNHHVVIFHRYKGCRCLVDFK 139
           +AKWLK NV TKKTKFL+H V  F   K    L+  K
Sbjct: 32  VAKWLKKNVKTKKTKFLSHIVEYFTSSKAIDALLKSK 68



 Score = 29.1 bits (62), Expect = 4.2
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = +1

Query: 211 HKLFHRAKKVPVS 249
           HK FHRAKKVPV+
Sbjct: 93  HKFFHRAKKVPVT 105


>AE014134-1753|AAF52848.1|  428|Drosophila melanogaster CG4758-PB,
           isoform B protein.
          Length = 428

 Score = 65.7 bits (153), Expect = 4e-11
 Identities = 25/41 (60%), Positives = 34/41 (82%)
 Frame = +1

Query: 391 RKIRLEMHMEQVFLDTVDAYVWIYDPKPWYYWVCGILVVLG 513
           RKIRL+MH EQ+F+D  +AYVWIYDP P +YW+ G +++LG
Sbjct: 180 RKIRLDMHPEQIFVDGSEAYVWIYDPIPLHYWIFGFILLLG 220



 Score = 46.4 bits (105), Expect = 3e-05
 Identities = 20/34 (58%), Positives = 25/34 (73%)
 Frame = +3

Query: 96  YFTGTKAVDALLTSKWATGKNPAFTTRIEVTHYL 197
           YFT +KA+DALL SK+  G NP FTTR +V  +L
Sbjct: 67  YFTSSKAIDALLKSKFTEGSNPLFTTREQVIEFL 100



 Score = 41.1 bits (92), Expect = 0.001
 Identities = 20/37 (54%), Positives = 23/37 (62%)
 Frame = +2

Query: 29  IAKWLKANVPTKKTKFLNHHVVIFHRYKGCRCLVDFK 139
           +AKWLK NV TKKTKFL+H V  F   K    L+  K
Sbjct: 45  VAKWLKKNVKTKKTKFLSHIVEYFTSSKAIDALLKSK 81



 Score = 29.1 bits (62), Expect = 4.2
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = +1

Query: 211 HKLFHRAKKVPVS 249
           HK FHRAKKVPV+
Sbjct: 106 HKFFHRAKKVPVT 118


>AE014134-1752|AAF52847.1|  415|Drosophila melanogaster CG4758-PA,
           isoform A protein.
          Length = 415

 Score = 65.7 bits (153), Expect = 4e-11
 Identities = 25/41 (60%), Positives = 34/41 (82%)
 Frame = +1

Query: 391 RKIRLEMHMEQVFLDTVDAYVWIYDPKPWYYWVCGILVVLG 513
           RKIRL+MH EQ+F+D  +AYVWIYDP P +YW+ G +++LG
Sbjct: 167 RKIRLDMHPEQIFVDGSEAYVWIYDPIPLHYWIFGFILLLG 207



 Score = 46.4 bits (105), Expect = 3e-05
 Identities = 20/34 (58%), Positives = 25/34 (73%)
 Frame = +3

Query: 96  YFTGTKAVDALLTSKWATGKNPAFTTRIEVTHYL 197
           YFT +KA+DALL SK+  G NP FTTR +V  +L
Sbjct: 54  YFTSSKAIDALLKSKFTEGSNPLFTTREQVIEFL 87



 Score = 41.1 bits (92), Expect = 0.001
 Identities = 20/37 (54%), Positives = 23/37 (62%)
 Frame = +2

Query: 29  IAKWLKANVPTKKTKFLNHHVVIFHRYKGCRCLVDFK 139
           +AKWLK NV TKKTKFL+H V  F   K    L+  K
Sbjct: 32  VAKWLKKNVKTKKTKFLSHIVEYFTSSKAIDALLKSK 68



 Score = 29.1 bits (62), Expect = 4.2
 Identities = 11/13 (84%), Positives = 12/13 (92%)
 Frame = +1

Query: 211 HKLFHRAKKVPVS 249
           HK FHRAKKVPV+
Sbjct: 93  HKFFHRAKKVPVT 105


>AY084174-1|AAL89912.1|  249|Drosophila melanogaster RE42193p
           protein.
          Length = 249

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 212 CKASMQVMSHFDSCCERWILAGR 144
           CK  +Q     D+CC+RW  +G+
Sbjct: 187 CKKKLQAAEGVDACCQRWFYSGK 209


>AE014297-243|AAF52034.1|  249|Drosophila melanogaster CG1172-PA
           protein.
          Length = 249

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 212 CKASMQVMSHFDSCCERWILAGR 144
           CK  +Q     D+CC+RW  +G+
Sbjct: 187 CKKKLQAAEGVDACCQRWFYSGK 209


>AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin protein.
          Length = 16215

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -1

Query: 532   EHATVIVPRRPESHRPSSTKASGRRSRRKHRPYPKK 425
             +  TVIV   PE   P S +    +S+ K  P PKK
Sbjct: 12612 DSVTVIVDEEPEIASPQSIEEHPEQSKEKLAPKPKK 12647


>AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC,
             isoform C protein.
          Length = 18074

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -1

Query: 532   EHATVIVPRRPESHRPSSTKASGRRSRRKHRPYPKK 425
             +  TVIV   PE   P S +    +S+ K  P PKK
Sbjct: 14471 DSVTVIVDEEPEIASPQSIEEHPEQSKEKLAPKPKK 14506


>AY118676-1|AAM50536.1|  990|Drosophila melanogaster AT06247p
           protein.
          Length = 990

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 14/50 (28%), Positives = 22/50 (44%)
 Frame = +2

Query: 44  KANVPTKKTKFLNHHVVIFHRYKGCRCLVDFKMGDRQESSVHNKNRSDSL 193
           K+ +P     ++ H     H  +G      + MGD + S  H+K  S SL
Sbjct: 18  KSKIPNPHNPYVEHRNRTIHSSQGHTLANGYAMGDPRSSRCHDKLFSGSL 67


>AE014298-3062|AAN09522.1|  764|Drosophila melanogaster CG11227-PB,
           isoform B protein.
          Length = 764

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +2

Query: 119 RCLVDFK-MGDRQESSVHNKNRSDSLLASMLCINSSTGPRR 238
           RC +DF+ +G  + S   NK+R+  +  SML  +SS  P R
Sbjct: 302 RCHIDFRNVGGPKSSRFKNKSRNTMINESMLFPSSSICPCR 342


>AE014298-3061|AAF50874.1|  753|Drosophila melanogaster CG11227-PA,
           isoform A protein.
          Length = 753

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +2

Query: 119 RCLVDFK-MGDRQESSVHNKNRSDSLLASMLCINSSTGPRR 238
           RC +DF+ +G  + S   NK+R+  +  SML  +SS  P R
Sbjct: 291 RCHIDFRNVGGPKSSRFKNKSRNTMINESMLFPSSSICPCR 331


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,235,063
Number of Sequences: 53049
Number of extensions: 398313
Number of successful extensions: 1185
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1185
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2110522698
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)