Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00643
(739 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B pro... 24 1.1
AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory recept... 24 1.5
AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory recept... 24 1.5
AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory recept... 24 1.5
AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc fin... 23 1.9
U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse ... 23 3.4
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 22 4.5
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 22 5.9
AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 21 7.9
AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory recept... 21 7.9
AF146649-1|AAD38009.1| 96|Tribolium castaneum ultrathorax prot... 21 7.9
>EF125544-1|ABL73928.1| 279|Tribolium castaneum obstractor B
protein.
Length = 279
Score = 24.2 bits (50), Expect = 1.1
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -2
Query: 735 ICCLSGLVANDETAQCFW 682
I C +GLV ND+ C W
Sbjct: 136 ITCPNGLVYNDKAGICSW 153
>AM292368-1|CAL23180.2| 387|Tribolium castaneum gustatory receptor
candidate 47 protein.
Length = 387
Score = 23.8 bits (49), Expect = 1.5
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 38 RVRIIPVKRRLRENVSVFV*FLQFPRGK*REKWLTVVSREISPSSLA 178
+V + V R+ + +F+ +Q K K TVV+RE+ +S+A
Sbjct: 320 QVNLSQVDPATRKEIDIFLVAIQMNPPKVSLKGYTVVNRELVTASVA 366
>AM292347-1|CAL23159.2| 387|Tribolium castaneum gustatory receptor
candidate 26 protein.
Length = 387
Score = 23.8 bits (49), Expect = 1.5
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 38 RVRIIPVKRRLRENVSVFV*FLQFPRGK*REKWLTVVSREISPSSLA 178
+V + V R+ + +F+ +Q K K TVV+RE+ +S+A
Sbjct: 320 QVNLSQVDPATRKEIDIFLVAIQMNPPKVSLKGYTVVNRELVTASVA 366
>AM292327-1|CAL23139.2| 387|Tribolium castaneum gustatory receptor
candidate 6 protein.
Length = 387
Score = 23.8 bits (49), Expect = 1.5
Identities = 14/47 (29%), Positives = 25/47 (53%)
Frame = +2
Query: 38 RVRIIPVKRRLRENVSVFV*FLQFPRGK*REKWLTVVSREISPSSLA 178
+V + V R+ + +F+ +Q K K TVV+RE+ +S+A
Sbjct: 320 QVNLSQVDPATRKEIDIFLVAIQMNPPKVSLKGYTVVNRELVTASVA 366
>AY316682-1|AAQ83696.1| 456|Tribolium castaneum Sp-like zinc finger
protein protein.
Length = 456
Score = 23.4 bits (48), Expect = 1.9
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +3
Query: 594 PLSLRCPGTVCLPWKRHCHNSPSRTGTFLSRSTERSHHS 710
PL+ G PWK+ +PS + T S T+R+ S
Sbjct: 54 PLADAAVGKGFHPWKKSPQGAPSPSSTPSSLPTQRTSTS 92
>U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse
transcriptase andRNase H protein.
Length = 712
Score = 22.6 bits (46), Expect = 3.4
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Frame = -1
Query: 655 ELWQWRFHGKHTVPG--QRRLNG--LRICSLGQQKLPVVFSVHRFRI 527
EL+Q + G V R L G L + ++ L V+F++H+FRI
Sbjct: 615 ELYQIQEDGSRGVIAFASRSLRGPELNYTTTEKELLGVIFALHKFRI 661
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 22.2 bits (45), Expect = 4.5
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = +2
Query: 554 NREFLLPKGTNPEAIKSSLSRDGVLT 631
N + L PKG N I+ + +GVL+
Sbjct: 833 NNKRLEPKGDNRYTIREEILANGVLS 858
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.8 bits (44), Expect = 5.9
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +1
Query: 484 STTNYWSTQT 513
STTN+W T+T
Sbjct: 1178 STTNHWQTKT 1187
>AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax
protein.
Length = 314
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/38 (21%), Positives = 19/38 (50%)
Frame = -1
Query: 637 FHGKHTVPGQRRLNGLRICSLGQQKLPVVFSVHRFRIR 524
FH H + +RR+ L ++++ + F R +++
Sbjct: 242 FHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLK 279
>AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory receptor
candidate 59 protein.
Length = 489
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = -2
Query: 684 WIGMFLSVMASCGN 643
WI FL+ M C N
Sbjct: 145 WISFFLNFMLHCNN 158
>AF146649-1|AAD38009.1| 96|Tribolium castaneum ultrathorax
protein.
Length = 96
Score = 21.4 bits (43), Expect = 7.9
Identities = 8/38 (21%), Positives = 19/38 (50%)
Frame = -1
Query: 637 FHGKHTVPGQRRLNGLRICSLGQQKLPVVFSVHRFRIR 524
FH H + +RR+ L ++++ + F R +++
Sbjct: 24 FHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLK 61
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 160,149
Number of Sequences: 336
Number of extensions: 3337
Number of successful extensions: 28
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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