Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00643
(739 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26) 36 0.034
SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29) 35 0.079
SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12) 32 0.56
SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26) 30 1.7
SB_21424| Best HMM Match : HSP20 (HMM E-Value=0) 30 1.7
SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 30 1.7
SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26) 30 1.7
SB_56656| Best HMM Match : VWA (HMM E-Value=3.8e-26) 29 3.9
SB_2062| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_43606| Best HMM Match : Y_phosphatase (HMM E-Value=3.9e-26) 28 6.9
SB_99| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_54185| Best HMM Match : Gal_Lectin (HMM E-Value=2.3) 28 9.1
SB_35820| Best HMM Match : TRAP_240kDa (HMM E-Value=0.006) 28 9.1
SB_53580| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
SB_41| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.1
>SB_21425| Best HMM Match : HSP20 (HMM E-Value=1.9e-26)
Length = 185
Score = 35.9 bits (79), Expect = 0.034
Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Frame = +2
Query: 545 REYNREFLLPKGTNPEAIKSSLSRDGVLTVEA---PLPQLAI 661
R++NR F+LP+ + + + L +DGVL +EA PL QL I
Sbjct: 140 RQFNRHFVLPREVDMDTLVPRLGKDGVLYIEADKRPLRQLDI 181
Score = 34.7 bits (76), Expect = 0.079
Identities = 16/49 (32%), Positives = 31/49 (63%)
Frame = +2
Query: 494 ITGPRKHEEKSDTKSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEA 640
++G ++HE + S +E+ R + LP+G + +I + ++ DG+L VEA
Sbjct: 32 VSGLQRHESEEGFDS--KEFRRCYNLPEGVDESSISTRIAEDGMLHVEA 78
>SB_49292| Best HMM Match : HSP20 (HMM E-Value=1.9e-29)
Length = 189
Score = 34.7 bits (76), Expect = 0.079
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +2
Query: 509 KHEEKSDTKSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEA 640
+H + + +E+ R F LP+G +PE + S +S G L +EA
Sbjct: 36 RHVNEGEFGFELKEFRRTFTLPEGIDPENVTSRISNHGHLHIEA 79
Score = 29.9 bits (64), Expect = 2.3
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +3
Query: 432 LRFDVSQYTPEEIVVKTVDNKLLVHANTRRNLIRNLCTENTTGSFCCPREQILRPLSLR 608
+ DV+ + PE I V+ + N+LLV+AN + + F PRE + L+ R
Sbjct: 100 MAIDVAGFPPESIKVQVLGNELLVNANHEVEHEGHYHAMHFNRQFVLPREVDMDSLTTR 158
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +2
Query: 512 HEEKSDTKSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEA 640
HE + + +NR+F+LP+ + +++ + L ++G L EA
Sbjct: 127 HEVEHEGHYHAMHFNRQFVLPREVDMDSLTTRLDKEGKLHFEA 169
>SB_16632| Best HMM Match : HSP20 (HMM E-Value=1e-12)
Length = 210
Score = 31.9 bits (69), Expect = 0.56
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +2
Query: 509 KHEEKSDTKSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEA 640
KH+ + + E++R + LP G + + S ++ DG+L +EA
Sbjct: 69 KHKSEGEHGYETSEFHRSYNLPDGVDVSTVSSRITGDGLLHIEA 112
Score = 31.5 bits (68), Expect = 0.74
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +2
Query: 554 NREFLLPKGTNPEAIKSSLSRDGVLTVEA 640
NR F+LPK + +++ S L +DG L +EA
Sbjct: 160 NRHFVLPKDVDMDSLVSRLGKDGKLYIEA 188
>SB_58906| Best HMM Match : HSP20 (HMM E-Value=3e-26)
Length = 695
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 545 REYNREFLLPKGTNPEAIKSSLSRDGVLTVEA 640
+E+ R F LP+G +K+ +S G L +EA
Sbjct: 49 KEFRRTFTLPEGVEASNVKTRISNHGQLHIEA 80
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +2
Query: 512 HEEKSDTKSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEA 640
HE + + +NR+F+LP+ + +++ + L ++G L EA
Sbjct: 128 HEVEHEGHYHAMHFNRQFILPREVDMDSLTTRLDKEGKLHFEA 170
>SB_21424| Best HMM Match : HSP20 (HMM E-Value=0)
Length = 424
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 545 REYNREFLLPKGTNPEAIKSSLSRDGVLTVEA 640
+E+ R F LP+G +K+ +S G L +EA
Sbjct: 48 KEFRRTFTLPEGVEASNVKTRISNHGQLHIEA 79
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 545 REYNREFLLPKGTNPEAIKSSLSRDGVLTVEA 640
+E+ R F LP+G +K+ +S G L +EA
Sbjct: 282 KEFRRTFTLPEGVEASNVKTRISNHGQLHIEA 313
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +2
Query: 512 HEEKSDTKSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEA 640
HE + + +NR+F+LP+ + +++ + L ++G L EA
Sbjct: 128 HEVEHEGHYHAMHFNRQFVLPREVDMDSLTTRLDKEGKLHFEA 170
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +2
Query: 512 HEEKSDTKSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEA 640
HE + + +NR+F+LP+ + +++ + L ++G L EA
Sbjct: 362 HEVEHEGHYHAMHFNRQFVLPREVDMDSLTTRLDKEGKLHFEA 404
>SB_3291| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 760
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 545 REYNREFLLPKGTNPEAIKSSLSRDGVLTVEA 640
+E+ R F LP+G +K+ +S G L +EA
Sbjct: 48 KEFRRTFTLPEGVEASNVKTRISNHGQLHIEA 79
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +2
Query: 512 HEEKSDTKSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEA 640
HE + + +NR+F+LP+ + +++ + L ++G L EA
Sbjct: 128 HEVEHEGHYHAMHFNRQFVLPREVDMDSLTTRLDKEGKLHFEA 170
>SB_38963| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 545 REYNREFLLPKGTNPEAIKSSLSRDGVLTVEA 640
+E+ R F LP+G +K+ +S G L +EA
Sbjct: 48 KEFRRTFALPEGVEASNVKTRISNHGQLHIEA 79
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +2
Query: 512 HEEKSDTKSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEA 640
HE + + +NR+F+LP+ + +++ + L ++G L EA
Sbjct: 128 HEVEHEGHYHAMHFNRQFVLPREVDMDSLTTRLDKEGKLHFEA 170
>SB_37349| Best HMM Match : HSP20 (HMM E-Value=7.3e-26)
Length = 190
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 545 REYNREFLLPKGTNPEAIKSSLSRDGVLTVEA 640
+E+ R F LP+G +K+ +S G L +EA
Sbjct: 48 KEFRRTFALPEGVEASNVKTRISNHGQLHIEA 79
Score = 28.7 bits (61), Expect = 5.2
Identities = 12/43 (27%), Positives = 25/43 (58%)
Frame = +2
Query: 512 HEEKSDTKSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEA 640
HE + + +NR+F+LP+ + +++ + L ++G L EA
Sbjct: 128 HEVEHEGHYHAMHFNRQFVLPREVDMDSLTTRLDKEGKLHFEA 170
>SB_56656| Best HMM Match : VWA (HMM E-Value=3.8e-26)
Length = 2157
Score = 29.1 bits (62), Expect = 3.9
Identities = 17/78 (21%), Positives = 31/78 (39%)
Frame = +3
Query: 234 NEEDGRRMSKFRSELMNRESNNFFKXXXXXXXXXQHSDSRQLAEPSHWDSLNSPLIQDEG 413
N++DG ++ + + + DS + E + WD+ + D+G
Sbjct: 1529 NQDDGTTGQNKKAPYSKDDQEQYQEGKVLDEGNGYDRDSHEGKEKNEWDNYDGD--NDDG 1586
Query: 414 DGKTLKLRFDVSQYTPEE 467
D KT++ D S Y E
Sbjct: 1587 DSKTIEANKDKSVYHHSE 1604
>SB_2062| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1136
Score = 29.1 bits (62), Expect = 3.9
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 700 DRSVLLDRNVPVRDGELWQWRFHGKHTVPGQRR 602
D S L++ +P++D L RF G VPG++R
Sbjct: 444 DSSQALEKILPLQDKPLATVRFQGSRKVPGKKR 476
>SB_43606| Best HMM Match : Y_phosphatase (HMM E-Value=3.9e-26)
Length = 280
Score = 28.3 bits (60), Expect = 6.9
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +3
Query: 510 NTRRNLIRNLCTENTTGSFCCPREQILRPLSLRCPGTVCLPWKRHCHNSPS-RTGTFLS 683
N+ + +R ++N+ GS C R+Q + + PG V L WKR C + R G + S
Sbjct: 198 NSNKGSVRVHPSDNS-GSLNC-RKQTNQTTAFTWPGVVNLTWKRGCQTMRNMRRGAYNS 254
>SB_99| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 965
Score = 28.3 bits (60), Expect = 6.9
Identities = 19/64 (29%), Positives = 30/64 (46%)
Frame = +3
Query: 510 NTRRNLIRNLCTENTTGSFCCPREQILRPLSLRCPGTVCLPWKRHCHNSPSRTGTFLSRS 689
N+ + +R ++N+ GS C R+Q + + PG V L WKR C + + S
Sbjct: 878 NSNKGSVRVHPSDNS-GSLNC-RKQTNQTTAFTWPGVVNLTWKRGCQTMRNMRSSTRSAV 935
Query: 690 TERS 701
T S
Sbjct: 936 TSPS 939
>SB_54185| Best HMM Match : Gal_Lectin (HMM E-Value=2.3)
Length = 225
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +3
Query: 510 NTRRNLIRNLCTENTTGSFCCPREQILRPLSLRCPGTVCLPWKRHC 647
N+ + +R ++N+ GS C R+Q + + PG V L WKR C
Sbjct: 157 NSNKGSVRVHPSDNS-GSLNC-RKQTNQTTAFTWPGVVNLTWKRGC 200
>SB_35820| Best HMM Match : TRAP_240kDa (HMM E-Value=0.006)
Length = 1382
Score = 27.9 bits (59), Expect = 9.1
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = -2
Query: 636 STVSTPSRDSEDLMASGFVPLGNKNSLLYSLYTDFVSDFSSCLRGPVICCRQS 478
ST+ P D L FV G+K LL L +S FS+ L ++C +S
Sbjct: 145 STLEIPLTDLCGLKWKKFVHAGHKLPLLCVLDDPILSSFSAALAQDILCSWRS 197
>SB_53580| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 940
Score = 27.9 bits (59), Expect = 9.1
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -2
Query: 735 ICCLSGLVANDETAQCFWIGMFLSVMASCGNGASTVSTPS 616
+ L+ +AN+ T + WIG F +V S G +S P+
Sbjct: 61 LATLTASIANNSTRKKLWIGAFFTVDISDGGWSSAGVLPA 100
>SB_41| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +3
Query: 447 SQYTPEEIVVKTVDNKLLVHANTRRNLIRNLCTENTTGSFCCPREQILRPLSLR 608
+ +T + + KT D N C + G+FCCP E +RP +++
Sbjct: 217 ASFTYKGFITKTFDETGCCPFTKATCCTHNKCCKE--GTFCCPTEPAVRPTAVQ 268
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,908,800
Number of Sequences: 59808
Number of extensions: 442999
Number of successful extensions: 1277
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1183
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1277
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1986074805
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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