Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00643
(739 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock prot... 87 1e-17
U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock prot... 87 1e-17
U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock prot... 87 1e-17
U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock prot... 45 5e-05
U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock prot... 45 5e-05
M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein ( C.ele... 44 1e-04
AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock pr... 44 1e-04
AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical ... 44 1e-04
U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock prot... 43 3e-04
U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock prot... 43 3e-04
K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock prot... 43 3e-04
K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock prot... 43 3e-04
Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical pr... 38 0.010
L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock pro... 38 0.010
X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C. el... 37 0.013
M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein ( C.ele... 37 0.013
AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock pr... 37 0.013
X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal frag... 37 0.017
U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock prot... 37 0.017
U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock prot... 37 0.017
K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock prot... 37 0.017
K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock prot... 37 0.017
Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical pr... 36 0.023
Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical pr... 35 0.052
Z81125-9|CAL64006.1| 112|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical pr... 33 0.16
Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical pr... 33 0.16
EF035034-1|ABK34454.1| 112|Caenorhabditis elegans heat-shock pr... 33 0.16
Z68342-8|CAA92771.1| 110|Caenorhabditis elegans Hypothetical pr... 32 0.49
U92044-1|AAC47521.1| 110|Caenorhabditis elegans heat shock prot... 32 0.49
L26290-1|AAA27981.1| 441|Caenorhabditis elegans clathrin-associ... 31 1.1
AF099001-7|AAP13777.1| 441|Caenorhabditis elegans Dumpy : short... 31 1.1
U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock prot... 30 2.0
U61944-5|AAB03121.2| 482|Caenorhabditis elegans Hypothetical pr... 28 6.0
U29488-13|AAA68780.1| 1599|Caenorhabditis elegans Hypothetical p... 28 6.0
AL023828-27|CAI46622.1| 308|Caenorhabditis elegans Hypothetical... 28 6.0
>U29612-8|AAW57827.1| 108|Caenorhabditis elegans Heat shock protein
protein 25,isoform c protein.
Length = 108
Score = 87.0 bits (206), Expect = 1e-17
Identities = 39/51 (76%), Positives = 46/51 (90%)
Frame = +2
Query: 509 KHEEKSDTKSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEAPLPQLAI 661
KHEEK+ ++V+REYN+EFLLP+GTNPE I S+LS DGVLTVEAPLPQLAI
Sbjct: 56 KHEEKTPQRTVFREYNQEFLLPRGTNPEQISSTLSTDGVLTVEAPLPQLAI 106
Score = 77.0 bits (181), Expect = 1e-14
Identities = 40/79 (50%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Frame = +3
Query: 378 DSLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHANTRRNLIRNLCTENTT 557
D+L SPLI+DE DGKTL+LRFDV+ Y PEE+ VKT+DN+LLVHA +
Sbjct: 12 DNLKSPLIKDESDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRTVFREYN 71
Query: 558 GSFCCPR----EQILRPLS 602
F PR EQI LS
Sbjct: 72 QEFLLPRGTNPEQISSTLS 90
>U29612-7|AAO61437.1| 205|Caenorhabditis elegans Heat shock protein
protein 25,isoform b protein.
Length = 205
Score = 87.0 bits (206), Expect = 1e-17
Identities = 39/51 (76%), Positives = 46/51 (90%)
Frame = +2
Query: 509 KHEEKSDTKSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEAPLPQLAI 661
KHEEK+ ++V+REYN+EFLLP+GTNPE I S+LS DGVLTVEAPLPQLAI
Sbjct: 153 KHEEKTPQRTVFREYNQEFLLPRGTNPEQISSTLSTDGVLTVEAPLPQLAI 203
Score = 77.0 bits (181), Expect = 1e-14
Identities = 40/79 (50%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Frame = +3
Query: 378 DSLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHANTRRNLIRNLCTENTT 557
D+L SPLI+DE DGKTL+LRFDV+ Y PEE+ VKT+DN+LLVHA +
Sbjct: 109 DNLKSPLIKDESDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRTVFREYN 168
Query: 558 GSFCCPR----EQILRPLS 602
F PR EQI LS
Sbjct: 169 QEFLLPRGTNPEQISSTLS 187
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/35 (48%), Positives = 27/35 (77%)
Frame = +1
Query: 151 KRNIPIKLGDFSVIDTEFSSIRERFDAEMRKMEEE 255
+R I + ++SVID EF ++R+RF+ EMR++EEE
Sbjct: 3 ERRIDVNRSNYSVIDNEFGNMRDRFEQEMRRVEEE 37
>U29612-6|AAA68804.1| 219|Caenorhabditis elegans Heat shock protein
protein 25,isoform a protein.
Length = 219
Score = 87.0 bits (206), Expect = 1e-17
Identities = 39/51 (76%), Positives = 46/51 (90%)
Frame = +2
Query: 509 KHEEKSDTKSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEAPLPQLAI 661
KHEEK+ ++V+REYN+EFLLP+GTNPE I S+LS DGVLTVEAPLPQLAI
Sbjct: 167 KHEEKTPQRTVFREYNQEFLLPRGTNPEQISSTLSTDGVLTVEAPLPQLAI 217
Score = 77.0 bits (181), Expect = 1e-14
Identities = 40/79 (50%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Frame = +3
Query: 378 DSLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVHANTRRNLIRNLCTENTT 557
D+L SPLI+DE DGKTL+LRFDV+ Y PEE+ VKT+DN+LLVHA +
Sbjct: 123 DNLKSPLIKDESDGKTLRLRFDVANYKPEEVTVKTIDNRLLVHAKHEEKTPQRTVFREYN 182
Query: 558 GSFCCPR----EQILRPLS 602
F PR EQI LS
Sbjct: 183 QEFLLPRGTNPEQISSTLS 201
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/35 (48%), Positives = 27/35 (77%)
Frame = +1
Query: 151 KRNIPIKLGDFSVIDTEFSSIRERFDAEMRKMEEE 255
+R I + ++SVID EF ++R+RF+ EMR++EEE
Sbjct: 17 ERRIDVNRSNYSVIDNEFGNMRDRFEQEMRRVEEE 51
>U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock protein
protein 17,isoform a protein.
Length = 149
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/44 (52%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +2
Query: 509 KHEEKSDTKS-VYREYNREFLLPKGTNPEAIKSSLSRDGVLTVE 637
KH EK+D V R + R++ LP G PE IKS LS +GVLTV+
Sbjct: 85 KHNEKTDKYGQVERHFVRKYNLPTGVRPEQIKSELSNNGVLTVK 128
Score = 31.1 bits (67), Expect = 0.85
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 441 DVSQYTPEEIVVKTVDNKLLV 503
DVSQ+ PEE+ V VDN+L++
Sbjct: 62 DVSQFEPEELKVNIVDNQLII 82
>U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock protein
protein 17,isoform b protein.
Length = 148
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/44 (52%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = +2
Query: 509 KHEEKSDTKS-VYREYNREFLLPKGTNPEAIKSSLSRDGVLTVE 637
KH EK+D V R + R++ LP G PE IKS LS +GVLTV+
Sbjct: 84 KHNEKTDKYGQVERHFVRKYNLPTGVRPEQIKSELSNNGVLTVK 127
Score = 31.1 bits (67), Expect = 0.85
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 441 DVSQYTPEEIVVKTVDNKLLV 503
DVSQ+ PEE+ V VDN+L++
Sbjct: 61 DVSQFEPEELKVNIVDNQLII 81
>M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 145
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/60 (38%), Positives = 38/60 (63%)
Frame = +2
Query: 509 KHEEKSDTKSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEAPLPQLAITDRNIPIQK 688
+ E K+D + ++R LLP+ + A+ S+LS DG L++EAP + A+ R+IPIQ+
Sbjct: 78 EQELKTDHGYSKKSFSRVILLPEDVDVGAVASNLSEDGKLSIEAPKKE-AVQGRSIPIQQ 136
>AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock
protein protein 16.2 protein.
Length = 145
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/60 (38%), Positives = 38/60 (63%)
Frame = +2
Query: 509 KHEEKSDTKSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEAPLPQLAITDRNIPIQK 688
+ E K+D + ++R LLP+ + A+ S+LS DG L++EAP + A+ R+IPIQ+
Sbjct: 78 EQELKTDHGYSKKSFSRVILLPEDVDVGAVASNLSEDGKLSIEAPKKE-AVQGRSIPIQQ 136
>AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical
protein Y55F3BR.6 protein.
Length = 180
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +2
Query: 512 HEEKSDTK-SVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEAPLPQ 652
H EK DT ++ + R F LPK PE+++S L+ DG LT++A P+
Sbjct: 110 HGEKEDTYGTIESTFKRRFPLPKAVAPESVQSQLTADGHLTIDAKAPE 157
>U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.11 protein.
Length = 145
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Frame = +2
Query: 515 EEKSDTKSVY--REYNREFLLPKGTNPEAIKSSLSRDGVLTVEAPLPQLAITDRNIPIQK 688
E++ T+ Y + ++R LLP+ + A+ S+LS DG L++EAP + AI R+IPIQ+
Sbjct: 78 EQELKTEHGYSKKSFSRVILLPEDVDVGAVASNLSEDGKLSIEAPKKE-AIQGRSIPIQQ 136
>U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.1 protein.
Length = 145
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Frame = +2
Query: 515 EEKSDTKSVY--REYNREFLLPKGTNPEAIKSSLSRDGVLTVEAPLPQLAITDRNIPIQK 688
E++ T+ Y + ++R LLP+ + A+ S+LS DG L++EAP + AI R+IPIQ+
Sbjct: 78 EQELKTEHGYSKKSFSRVILLPEDVDVGAVASNLSEDGKLSIEAPKKE-AIQGRSIPIQQ 136
>K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock protein
16-1a protein.
Length = 145
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Frame = +2
Query: 515 EEKSDTKSVY--REYNREFLLPKGTNPEAIKSSLSRDGVLTVEAPLPQLAITDRNIPIQK 688
E++ T+ Y + ++R LLP+ + A+ S+LS DG L++EAP + AI R+IPIQ+
Sbjct: 78 EQELKTEHGYSKKSFSRVILLPEDVDVGAVASNLSEDGKLSIEAPKKE-AIQGRSIPIQQ 136
>K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock protein
16-1 protein.
Length = 146
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Frame = +2
Query: 515 EEKSDTKSVY--REYNREFLLPKGTNPEAIKSSLSRDGVLTVEAPLPQLAITDRNIPIQK 688
E++ T+ Y + ++R LLP+ + A+ S+LS DG L++EAP + AI R+IPIQ+
Sbjct: 79 EQELKTEHGYSKKSFSRVILLPEDVDVGAVASNLSEDGKLSIEAPKKE-AIQGRSIPIQQ 137
>Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical
protein F43D9.4 protein.
Length = 159
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/57 (31%), Positives = 32/57 (56%)
Frame = +2
Query: 512 HEEKSDTKSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEAPLPQLAITDRNIPI 682
HE K++ R + R+F LPK + I + ++++G +T++AP T R +PI
Sbjct: 82 HEVKTEHGFSKRSFTRQFTLPKDVDLAHIHTVINKEGQMTIDAPKTGSNTTVRALPI 138
>L15188-10|AAA27953.1| 110|Caenorhabditis elegans Heat shock
protein protein 12.2 protein.
Length = 110
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +2
Query: 509 KHEEKSDTK-SVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEA 640
+HE +SD +V RE NR + LP + +KS L+ GVLT+ A
Sbjct: 62 RHETRSDNHGTVAREINRAYKLPDDVDVSTVKSHLATRGVLTITA 106
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Frame = +3
Query: 369 SHWD---SLNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLVH 506
S WD N +++ + ++ DV +TP+EI VK +LL+H
Sbjct: 12 STWDWPLQHNDGVVKVHNTKEKFEVGLDVQFFTPKEIEVKVSGQELLIH 60
>X01577-1|CAA25732.1| 97|Caenorhabditis elegans protein ( C.
elegans mRNA 3'-regionfor heat shock protein hsp 16-41
(exon 2).somal genes.).
Length = 97
Score = 37.1 bits (82), Expect = 0.013
Identities = 19/56 (33%), Positives = 35/56 (62%)
Frame = +2
Query: 515 EEKSDTKSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEAPLPQLAITDRNIPI 682
E KS+ + R +++ LLP+ + ++KS++S +G L +EA P+ + R+IPI
Sbjct: 38 ETKSEHGYLKRSFSKMILLPEDADLPSVKSAISNEGKLQIEA--PKKTNSSRSIPI 91
>M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 144
Score = 37.1 bits (82), Expect = 0.013
Identities = 19/56 (33%), Positives = 35/56 (62%)
Frame = +2
Query: 515 EEKSDTKSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEAPLPQLAITDRNIPI 682
E KS+ + R +++ LLP+ + ++KS++S +G L +EA P+ + R+IPI
Sbjct: 85 ETKSEHGYLKRSFSKMILLPEDADLPSVKSAISNEGKLQIEA--PKKTNSSRSIPI 138
>AC006774-2|AAF60616.1| 143|Caenorhabditis elegans Heat shock
protein protein 16.41 protein.
Length = 143
Score = 37.1 bits (82), Expect = 0.013
Identities = 19/56 (33%), Positives = 35/56 (62%)
Frame = +2
Query: 515 EEKSDTKSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEAPLPQLAITDRNIPI 682
E KS+ + R +++ LLP+ + ++KS++S +G L +EA P+ + R+IPI
Sbjct: 84 ETKSEHGYLKRSFSKMILLPEDADLPSVKSAISNEGKLQIEA--PKKTNSSRSIPI 137
>X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal
fragment of hsp 16-48 protein.
Length = 135
Score = 36.7 bits (81), Expect = 0.017
Identities = 19/56 (33%), Positives = 35/56 (62%)
Frame = +2
Query: 515 EEKSDTKSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEAPLPQLAITDRNIPI 682
E+KS+ R +++ LLP+ + ++KS++S +G L +EA P+ + R+IPI
Sbjct: 76 EKKSEHGYSKRSFSKMILLPEDVDLTSVKSAISNEGKLQIEA--PKKTNSSRSIPI 129
>U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.49 protein.
Length = 143
Score = 36.7 bits (81), Expect = 0.017
Identities = 19/56 (33%), Positives = 35/56 (62%)
Frame = +2
Query: 515 EEKSDTKSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEAPLPQLAITDRNIPI 682
E+KS+ R +++ LLP+ + ++KS++S +G L +EA P+ + R+IPI
Sbjct: 84 EKKSEHGYSKRSFSKMILLPEDVDLTSVKSAISNEGKLQIEA--PKKTNSSRSIPI 137
>U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.48 protein.
Length = 143
Score = 36.7 bits (81), Expect = 0.017
Identities = 19/56 (33%), Positives = 35/56 (62%)
Frame = +2
Query: 515 EEKSDTKSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEAPLPQLAITDRNIPI 682
E+KS+ R +++ LLP+ + ++KS++S +G L +EA P+ + R+IPI
Sbjct: 84 EKKSEHGYSKRSFSKMILLPEDVDLTSVKSAISNEGKLQIEA--PKKTNSSRSIPI 137
>K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock protein
16-48a protein.
Length = 144
Score = 36.7 bits (81), Expect = 0.017
Identities = 19/56 (33%), Positives = 35/56 (62%)
Frame = +2
Query: 515 EEKSDTKSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEAPLPQLAITDRNIPI 682
E+KS+ R +++ LLP+ + ++KS++S +G L +EA P+ + R+IPI
Sbjct: 85 EKKSEHGYSKRSFSKMILLPEDVDLTSVKSAISNEGKLQIEA--PKKTNSSRSIPI 138
>K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock protein
16-48 protein.
Length = 143
Score = 36.7 bits (81), Expect = 0.017
Identities = 19/56 (33%), Positives = 35/56 (62%)
Frame = +2
Query: 515 EEKSDTKSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEAPLPQLAITDRNIPI 682
E+KS+ R +++ LLP+ + ++KS++S +G L +EA P+ + R+IPI
Sbjct: 84 EKKSEHGYSKRSFSKMILLPEDVDLTSVKSAISNEGKLQIEA--PKKTNSSRSIPI 137
>Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.4 protein.
Length = 147
Score = 36.3 bits (80), Expect = 0.023
Identities = 15/60 (25%), Positives = 38/60 (63%)
Frame = +2
Query: 509 KHEEKSDTKSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEAPLPQLAITDRNIPIQK 688
+H+ +++ + + ++R LLP+ + ++ ++LS DG L +EAP + + R++P+++
Sbjct: 80 EHDVENEHGASRKSFSRMILLPEDVDITSVATNLSNDGKLCIEAPKLE-GVCGRSVPVKE 138
>Z68342-1|CAA92770.1| 109|Caenorhabditis elegans Hypothetical
protein F38E11.1 protein.
Length = 109
Score = 35.1 bits (77), Expect = 0.052
Identities = 18/42 (42%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +2
Query: 512 HEEKSDT-KSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTV 634
H K D S+ R R + LPKGT+P IKS L G+L +
Sbjct: 62 HTTKDDKFGSITRSITRCYRLPKGTDPATIKSKLDGSGILHI 103
>Z81125-9|CAL64006.1| 112|Caenorhabditis elegans Hypothetical
protein T22A3.2b protein.
Length = 112
Score = 33.5 bits (73), Expect = 0.16
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 539 VYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEA 640
V RE +R + LP+ +P ++S L+ GVLT+ A
Sbjct: 76 VNREVHRTYKLPEDVDPSTVRSHLNSSGVLTITA 109
>Z81125-8|CAB03380.1| 109|Caenorhabditis elegans Hypothetical
protein T22A3.2a protein.
Length = 109
Score = 33.5 bits (73), Expect = 0.16
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 539 VYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEA 640
V RE +R + LP+ +P ++S L+ GVLT+ A
Sbjct: 73 VNREVHRTYKLPEDVDPSTVRSHLNSSGVLTITA 106
>Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.3 protein.
Length = 147
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +2
Query: 509 KHEE-KSDTKSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEAP 643
+H+E ++D S + Y++ +LP+ + + S+LS DG L +E P
Sbjct: 79 EHQEIENDNISTTQTYSKSIVLPEDVDVTHLSSNLSEDGKLLIEVP 124
>EF035034-1|ABK34454.1| 112|Caenorhabditis elegans heat-shock
protein 12.1 protein.
Length = 112
Score = 33.5 bits (73), Expect = 0.16
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +2
Query: 539 VYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEA 640
V RE +R + LP+ +P ++S L+ GVLT+ A
Sbjct: 76 VNREVHRTYKLPEDVDPSTVRSHLNSSGVLTITA 109
>Z68342-8|CAA92771.1| 110|Caenorhabditis elegans Hypothetical
protein F38E11.2 protein.
Length = 110
Score = 31.9 bits (69), Expect = 0.49
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 509 KHEEKSDT-KSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEA 640
+H K D+ V R R + LPK + + IKS+L G+L +EA
Sbjct: 62 EHNVKKDSFGDVSRNITRCYKLPKNVDMKTIKSNLDSHGILHIEA 106
>U92044-1|AAC47521.1| 110|Caenorhabditis elegans heat shock protein
12.6 protein.
Length = 110
Score = 31.9 bits (69), Expect = 0.49
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 509 KHEEKSDT-KSVYREYNREFLLPKGTNPEAIKSSLSRDGVLTVEA 640
+H K D+ V R R + LPK + + IKS+L G+L +EA
Sbjct: 62 EHNVKKDSFGDVSRNITRCYKLPKNVDMKTIKSNLDSHGILHIEA 106
>L26290-1|AAA27981.1| 441|Caenorhabditis elegans
clathrin-associated protein homologueprotein.
Length = 441
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +2
Query: 560 EFLLPKGTNPEAIKSSLSRDGVLTVEAPLP 649
+F P+ T+P +K+ +++ GV T +AP+P
Sbjct: 117 DFGYPQNTDPGVLKTFITQQGVRTADAPVP 146
>AF099001-7|AAP13777.1| 441|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 23, isoform a protein.
Length = 441
Score = 30.7 bits (66), Expect = 1.1
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +2
Query: 560 EFLLPKGTNPEAIKSSLSRDGVLTVEAPLP 649
+F P+ T+P +K+ +++ GV T +AP+P
Sbjct: 117 DFGYPQNTDPGVLKTFITQQGVRTADAPVP 146
>U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock protein
protein 43 protein.
Length = 368
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +3
Query: 384 LNSPLIQDEGDGKTLKLRFDVSQYTPEEIVVKTVDNKLLV 503
+NS ++ D+ + + D Q+ PEEI VKT+D+ L++
Sbjct: 103 VNSNVVNDD---RRFAVDMDCYQFRPEEIQVKTLDDTLMI 139
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = +2
Query: 509 KHEEKSDTKSVYREYN-REFLLPKGTNPEAIKSSLSRDGVLTVEA-PLPQLAI--TDRNI 676
+HE+ D + + Y R++ LP+ + +I+SS+ G L VEA +A+ +R I
Sbjct: 142 RHEDIRDKDNFTKMYFVRKYQLPRDVDFNSIQSSIDAKGRLQVEAGKFNNMALQGRERMI 201
Query: 677 PIQ 685
PI+
Sbjct: 202 PIE 204
>U61944-5|AAB03121.2| 482|Caenorhabditis elegans Hypothetical
protein T12E12.1 protein.
Length = 482
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 2/70 (2%)
Frame = +3
Query: 453 YTPEEIVVKTVDNKLLVHANTRRNLIRNLCTENTTGSFCCPRE--QILRPLSLRCPGTVC 626
Y P E V+ + N ++ R L+R++ + FC E I+R ++ C
Sbjct: 180 YAPSEFVLSIIKNSPVIKLKYERFLLRDMVNSHPHLKFCVGNECPVIIRSTEVKPKRVTC 239
Query: 627 LPWKRHCHNS 656
+ CH S
Sbjct: 240 M----QCHTS 245
>U29488-13|AAA68780.1| 1599|Caenorhabditis elegans Hypothetical
protein C56C10.12 protein.
Length = 1599
Score = 28.3 bits (60), Expect = 6.0
Identities = 17/46 (36%), Positives = 22/46 (47%)
Frame = +2
Query: 554 NREFLLPKGTNPEAIKSSLSRDGVLTVEAPLPQLAITDRNIPIQKH 691
NRE LP +SS VL V + LPQ + D +I Q+H
Sbjct: 1316 NRESPLPPEIGSPRSRSSAKPFPVLPVHSGLPQAPLIDPSILFQQH 1361
>AL023828-27|CAI46622.1| 308|Caenorhabditis elegans Hypothetical
protein Y17G7B.23 protein.
Length = 308
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = -2
Query: 651 CGNGASTVSTPSRDSEDLMASGFVPLGNKNSLLYSLYTDFVSD 523
CG S VST S + + +P+ NK + + + DFV D
Sbjct: 43 CGTPNSLVSTVSGNCASMCFELMIPVNNKLAFVRGCHADFVWD 85
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,009,589
Number of Sequences: 27780
Number of extensions: 332708
Number of successful extensions: 1122
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 1058
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1122
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1735436670
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -