Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00642
(598 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 56 3e-10
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 27 0.091
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 27 0.091
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 27 0.091
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 27 0.091
AM292334-1|CAL23146.2| 390|Tribolium castaneum gustatory recept... 24 0.85
DQ659254-1|ABG47452.1| 431|Tribolium castaneum imaginal disc gr... 24 1.1
DQ855498-1|ABH88185.1| 127|Tribolium castaneum chemosensory pro... 23 2.6
AM292333-1|CAL23145.2| 316|Tribolium castaneum gustatory recept... 23 2.6
AJ973445-1|CAJ01492.1| 127|Tribolium castaneum hypothetical pro... 23 2.6
DQ855503-1|ABH88190.1| 124|Tribolium castaneum chemosensory pro... 22 4.5
EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetyla... 21 6.0
DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired pr... 21 6.0
EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-toler... 21 7.9
AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein. 21 7.9
AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 21 7.9
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 55.6 bits (128), Expect = 3e-10
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 9/86 (10%)
Frame = +1
Query: 256 KEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI----- 420
+ LL + G+ KP+AIQ+ AI + GRD+++ AQ+G+GKTA F + I+ +
Sbjct: 166 RPHLLENVKKSGYTKPTAIQKYAIPVILSGRDLMSCAQTGSGKTAAFMLPIIHNLLSDKN 225
Query: 421 ----DTSIRECQALILAPTRELAQQI 486
+ + + +I++PTRELA QI
Sbjct: 226 PPNTENNCAQPVVVIMSPTRELAIQI 251
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 27.5 bits (58), Expect = 0.091
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +3
Query: 402 IDSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGDSSCDHLNAKCHACIGGTNVREDI 569
ID + + + MS+ G H G EGGD S + +++ + + N R+D+
Sbjct: 1155 IDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDESANETDSETVSTV-PQNKRDDL 1209
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 27.5 bits (58), Expect = 0.091
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +3
Query: 402 IDSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGDSSCDHLNAKCHACIGGTNVREDI 569
ID + + + MS+ G H G EGGD S + +++ + + N R+D+
Sbjct: 1155 IDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDESANETDSETVSTV-PQNKRDDL 1209
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 27.5 bits (58), Expect = 0.091
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +3
Query: 402 IDSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGDSSCDHLNAKCHACIGGTNVREDI 569
ID + + + MS+ G H G EGGD S + +++ + + N R+D+
Sbjct: 1155 IDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDESANETDSETVSTV-PQNKRDDL 1209
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 27.5 bits (58), Expect = 0.091
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +3
Query: 402 IDSTTNRYKHS*MSSFDPGSHKRAGPTNSEGGDSSCDHLNAKCHACIGGTNVREDI 569
ID + + + MS+ G H G EGGD S + +++ + + N R+D+
Sbjct: 1155 IDPSGHISRRRSMSASSRGDHHHLGAVTEEGGDESANETDSETVSTV-PQNKRDDL 1209
>AM292334-1|CAL23146.2| 390|Tribolium castaneum gustatory receptor
candidate 13 protein.
Length = 390
Score = 24.2 bits (50), Expect = 0.85
Identities = 15/50 (30%), Positives = 30/50 (60%)
Frame = +1
Query: 397 SISILQQIDTSIRECQALILAPTRELAQQIQKVVIALVIT*MLNAMLALV 546
S+S L+++ ++ Q L LAP + Q+ V++A ++T A+++LV
Sbjct: 74 SMSNLKKLKFLLKLGQLLGLAPVKFYVQKFYVVILAFLLT--AGAIISLV 121
>DQ659254-1|ABG47452.1| 431|Tribolium castaneum imaginal disc
growth factor 4 protein.
Length = 431
Score = 23.8 bits (49), Expect = 1.1
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 194 DPGTLDTDWDQV-VETFDDMNPKKNC*EAYTPMVLKNLL 307
DP L + D + +E FD PK+N EA P L L+
Sbjct: 222 DPRALAPNLDFITLEAFDFYTPKRNPKEADYPAPLYELI 260
>DQ855498-1|ABH88185.1| 127|Tribolium castaneum chemosensory
protein 12 protein.
Length = 127
Score = 22.6 bits (46), Expect = 2.6
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +2
Query: 542 WWHQCP*RYSPTG 580
WW++ +Y PTG
Sbjct: 98 WWNELEAKYDPTG 110
>AM292333-1|CAL23145.2| 316|Tribolium castaneum gustatory receptor
candidate 12 protein.
Length = 316
Score = 22.6 bits (46), Expect = 2.6
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = +1
Query: 400 ISILQQIDTSIRECQALILAPTRELAQQIQKVVIALVIT*MLNAMLALV 546
+S L+++ ++ Q L LAP + Q+ V++A ++T A+++LV
Sbjct: 1 MSNLKKLKFLLKLGQLLGLAPVKFYVQKFYVVILAFLLT--AGAIISLV 47
>AJ973445-1|CAJ01492.1| 127|Tribolium castaneum hypothetical
protein protein.
Length = 127
Score = 22.6 bits (46), Expect = 2.6
Identities = 6/13 (46%), Positives = 9/13 (69%)
Frame = +2
Query: 542 WWHQCP*RYSPTG 580
WW++ +Y PTG
Sbjct: 98 WWNELEAKYDPTG 110
>DQ855503-1|ABH88190.1| 124|Tribolium castaneum chemosensory
protein 17 protein.
Length = 124
Score = 21.8 bits (44), Expect = 4.5
Identities = 6/17 (35%), Positives = 10/17 (58%)
Frame = +2
Query: 542 WWHQCP*RYSPTGDWCS 592
WW + +Y P G++ S
Sbjct: 96 WWQELQEKYDPKGEYKS 112
>EU019711-1|ABU25223.1| 534|Tribolium castaneum chitin deacetylase
1 protein.
Length = 534
Score = 21.4 bits (43), Expect = 6.0
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = -2
Query: 591 EHQSPVGEYLHGHW 550
E+++P+G Y H W
Sbjct: 415 ENRAPLGLYFHAAW 428
>DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired
protein.
Length = 311
Score = 21.4 bits (43), Expect = 6.0
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -3
Query: 191 FPEVHRNYLDPSMAHFW 141
F +V R+Y DP ++W
Sbjct: 141 FVKVPRHYDDPGKGNYW 157
>EF468474-1|ABR25244.1| 516|Tribolium castaneum methoprene-tolerant
protein.
Length = 516
Score = 21.0 bits (42), Expect = 7.9
Identities = 7/26 (26%), Positives = 16/26 (61%)
Frame = +2
Query: 83 SPTPRIESGL*MSEDWPEDSKNGPSK 160
+P+PR+ + ++D ++N P+K
Sbjct: 419 TPSPRVYGNVNENQDCSTPTENSPTK 444
>AY584475-1|AAS93634.1| 209|Tribolium castaneum homothorax protein.
Length = 209
Score = 21.0 bits (42), Expect = 7.9
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3
Query: 165 KVVTMDLREWTLGHLT 212
KV T LR W HLT
Sbjct: 187 KVATNILRAWLFQHLT 202
>AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein.
Length = 456
Score = 21.0 bits (42), Expect = 7.9
Identities = 9/16 (56%), Positives = 9/16 (56%)
Frame = +3
Query: 165 KVVTMDLREWTLGHLT 212
KV T LR W HLT
Sbjct: 343 KVATNILRAWLFQHLT 358
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,876
Number of Sequences: 336
Number of extensions: 3846
Number of successful extensions: 19
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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