Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00642
(598 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 137 5e-33
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 137 6e-33
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 134 3e-32
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 134 3e-32
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 93 2e-19
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 80 1e-15
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 71 5e-13
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 71 5e-13
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 71 5e-13
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 68 6e-12
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 68 6e-12
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 65 3e-11
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 65 3e-11
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 65 3e-11
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 64 5e-11
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 63 2e-10
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 63 2e-10
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 58 4e-09
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 57 8e-09
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 56 1e-08
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 56 3e-08
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 56 3e-08
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 54 6e-08
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 54 6e-08
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 54 8e-08
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 54 1e-07
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 54 1e-07
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 53 1e-07
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 51 5e-07
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 51 5e-07
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 51 5e-07
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 51 5e-07
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 49 2e-06
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 49 2e-06
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 49 2e-06
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 49 2e-06
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 49 2e-06
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 46 2e-05
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 46 2e-05
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 46 2e-05
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 46 2e-05
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 45 4e-05
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 44 1e-04
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 42 3e-04
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 42 4e-04
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 42 4e-04
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 39 0.002
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 38 0.004
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 34 0.067
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 32 0.36
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 31 0.62
U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical pr... 31 0.62
AL132948-12|CAD31814.1| 283|Caenorhabditis elegans Hypothetical... 31 0.82
AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical ... 30 1.1
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 29 2.5
U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division ... 29 3.3
U80024-6|AAW88410.1| 300|Caenorhabditis elegans Serpentine rece... 28 4.4
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 28 5.8
Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical pr... 27 7.7
Z48544-1|CAA88435.1| 473|Caenorhabditis elegans Hypothetical pr... 27 7.7
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 137 bits (332), Expect = 5e-33
Identities = 67/84 (79%), Positives = 76/84 (90%)
Frame = +1
Query: 256 KEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIR 435
+E+LLRGIYAYGFEKPSAIQQRAI ++ RDVIAQAQSGTGKTATFSIS+LQ +DT +R
Sbjct: 34 REDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQSLDTQVR 93
Query: 436 ECQALILAPTRELAQQIQKVVIAL 507
E QALIL+PTRELA QIQKVV+AL
Sbjct: 94 ETQALILSPTRELAVQIQKVVLAL 117
Score = 50.0 bits (114), Expect = 1e-06
Identities = 19/29 (65%), Positives = 25/29 (86%)
Frame = +3
Query: 510 DHLNAKCHACIGGTNVREDIRQLETGVHV 596
D++N +CHACIGGTN+ EDIR+L+ G HV
Sbjct: 119 DYMNVQCHACIGGTNLGEDIRKLDYGQHV 147
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 137 bits (331), Expect = 6e-33
Identities = 66/84 (78%), Positives = 76/84 (90%)
Frame = +1
Query: 256 KEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIR 435
+E+LLRGIYAYGFEKPSAIQQRA+ ++ RDVIAQAQSGTGKTATFSIS+LQ +DT +R
Sbjct: 34 REDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSISVLQSLDTQVR 93
Query: 436 ECQALILAPTRELAQQIQKVVIAL 507
E QALIL+PTRELA QIQKVV+AL
Sbjct: 94 ETQALILSPTRELAVQIQKVVLAL 117
Score = 50.0 bits (114), Expect = 1e-06
Identities = 19/29 (65%), Positives = 25/29 (86%)
Frame = +3
Query: 510 DHLNAKCHACIGGTNVREDIRQLETGVHV 596
D++N +CHACIGGTN+ EDIR+L+ G HV
Sbjct: 119 DYMNVQCHACIGGTNLGEDIRKLDYGQHV 147
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 134 bits (325), Expect = 3e-32
Identities = 66/86 (76%), Positives = 75/86 (87%)
Frame = +1
Query: 250 EPKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTS 429
E KEELLRGIY +GFEKPSAIQ+RAI+PC G+DVIAQAQSGTGKTATFS+SILQ+ID
Sbjct: 35 ELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHE 94
Query: 430 IRECQALILAPTRELAQQIQKVVIAL 507
QAL++APTRELAQQIQKV+ AL
Sbjct: 95 DPHVQALVMAPTRELAQQIQKVMSAL 120
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +3
Query: 510 DHLNAKCHACIGGTNVREDIRQLETGVHV 596
++LN CIGGT+VR+D R+LE G+HV
Sbjct: 122 EYLNVNILPCIGGTSVRDDQRKLEAGIHV 150
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +2
Query: 200 GTLDTDWDQVVETFDDMNPKK 262
G ++ ++DQVVE+FDDM K+
Sbjct: 18 GLIEGNYDQVVESFDDMELKE 38
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 134 bits (325), Expect = 3e-32
Identities = 66/86 (76%), Positives = 75/86 (87%)
Frame = +1
Query: 250 EPKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTS 429
E KEELLRGIY +GFEKPSAIQ+RAI+PC G+DVIAQAQSGTGKTATFS+SILQ+ID
Sbjct: 35 ELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQRIDHE 94
Query: 430 IRECQALILAPTRELAQQIQKVVIAL 507
QAL++APTRELAQQIQKV+ AL
Sbjct: 95 DPHVQALVMAPTRELAQQIQKVMSAL 120
Score = 40.3 bits (90), Expect = 0.001
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = +3
Query: 510 DHLNAKCHACIGGTNVREDIRQLETGVHV 596
++LN CIGGT+VR+D R+LE G+HV
Sbjct: 122 EYLNVNILPCIGGTSVRDDQRKLEAGIHV 150
Score = 28.7 bits (61), Expect = 3.3
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +2
Query: 200 GTLDTDWDQVVETFDDMNPKK 262
G ++ ++DQVVE+FDDM K+
Sbjct: 18 GLIEGNYDQVVESFDDMELKE 38
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 92.7 bits (220), Expect = 2e-19
Identities = 45/86 (52%), Positives = 59/86 (68%)
Frame = +1
Query: 250 EPKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTS 429
E KEELLRGIY +GFEKPSAIQ+ A+ PC G+DV Q+Q+G+GKT I ILQ ID
Sbjct: 2 ELKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDCE 61
Query: 430 IRECQALILAPTRELAQQIQKVVIAL 507
Q ++LAP R +AQ+ + + +L
Sbjct: 62 DAHLQVILLAPQRGMAQRAHEQLKSL 87
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 80.2 bits (189), Expect = 1e-15
Identities = 33/82 (40%), Positives = 59/82 (71%)
Frame = +1
Query: 262 ELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIREC 441
+LL GI+ G+EKPS IQ+ +I + G+D++A+A++GTGKT + I ++++I +++
Sbjct: 53 DLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYCIPVIEKIQPALKAI 112
Query: 442 QALILAPTRELAQQIQKVVIAL 507
QA+++ PTRELA Q ++ + L
Sbjct: 113 QAMVIVPTRELALQTSQICVEL 134
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 513 HLNAKCHACIGGTNVREDIRQLETGVHV 596
H+ K GGT++R+DI +L VH+
Sbjct: 137 HIQLKVMVTTGGTDLRDDIMRLNGTVHL 164
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 71.3 bits (167), Expect = 5e-13
Identities = 38/79 (48%), Positives = 47/79 (59%)
Frame = +1
Query: 256 KEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIR 435
K E+LR I GFE PS +Q I I G DV+ QA+SG GKTA F I+ LQQ++
Sbjct: 49 KPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLEPVDG 108
Query: 436 ECQALILAPTRELAQQIQK 492
E + + TRELA QI K
Sbjct: 109 EVSVVCMCHTRELAFQISK 127
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 71.3 bits (167), Expect = 5e-13
Identities = 38/79 (48%), Positives = 47/79 (59%)
Frame = +1
Query: 256 KEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIR 435
K E+LR I GFE PS +Q I I G DV+ QA+SG GKTA F I+ LQQ++
Sbjct: 49 KPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLEPVDG 108
Query: 436 ECQALILAPTRELAQQIQK 492
E + + TRELA QI K
Sbjct: 109 EVSVVCMCHTRELAFQISK 127
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 71.3 bits (167), Expect = 5e-13
Identities = 38/79 (48%), Positives = 47/79 (59%)
Frame = +1
Query: 256 KEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIR 435
K E+LR I GFE PS +Q I I G DV+ QA+SG GKTA F I+ LQQ++
Sbjct: 48 KPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLEPVDG 107
Query: 436 ECQALILAPTRELAQQIQK 492
E + + TRELA QI K
Sbjct: 108 EVSVVCMCHTRELAFQISK 126
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 67.7 bits (158), Expect = 6e-12
Identities = 30/69 (43%), Positives = 48/69 (69%)
Frame = +1
Query: 292 FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRE 471
F++PS +Q RAI + GRD++ QA+SGTGKT FS+ ++ +D+ Q +I+ PTRE
Sbjct: 42 FDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTRE 101
Query: 472 LAQQIQKVV 498
++ QI++ V
Sbjct: 102 ISVQIKETV 110
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 67.7 bits (158), Expect = 6e-12
Identities = 30/69 (43%), Positives = 48/69 (69%)
Frame = +1
Query: 292 FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRE 471
F++PS +Q RAI + GRD++ QA+SGTGKT FS+ ++ +D+ Q +I+ PTRE
Sbjct: 42 FDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVFSVLAVENLDSRSSHIQKVIVTPTRE 101
Query: 472 LAQQIQKVV 498
++ QI++ V
Sbjct: 102 ISVQIKETV 110
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 65.3 bits (152), Expect = 3e-11
Identities = 41/94 (43%), Positives = 60/94 (63%), Gaps = 2/94 (2%)
Frame = +1
Query: 223 SSCRNLR*HEPKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATF 396
SS R LR K E+L+ + F+ P+ IQ+ A+ + ++IAQAQSGTGKTA F
Sbjct: 209 SSFRELR---LKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAF 265
Query: 397 SISILQQIDTSIRECQALILAPTRELAQQIQKVV 498
+++L +ID ++ Q + LAPT ELA+QI +VV
Sbjct: 266 VLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVV 299
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 65.3 bits (152), Expect = 3e-11
Identities = 41/94 (43%), Positives = 60/94 (63%), Gaps = 2/94 (2%)
Frame = +1
Query: 223 SSCRNLR*HEPKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATF 396
SS R LR K E+L+ + F+ P+ IQ+ A+ + ++IAQAQSGTGKTA F
Sbjct: 234 SSFRELR---LKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAF 290
Query: 397 SISILQQIDTSIRECQALILAPTRELAQQIQKVV 498
+++L +ID ++ Q + LAPT ELA+QI +VV
Sbjct: 291 VLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVV 324
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 65.3 bits (152), Expect = 3e-11
Identities = 41/94 (43%), Positives = 60/94 (63%), Gaps = 2/94 (2%)
Frame = +1
Query: 223 SSCRNLR*HEPKEELLRGIYAYGFEKPSAIQQRAIMPCIQG--RDVIAQAQSGTGKTATF 396
SS R LR K E+L+ + F+ P+ IQ+ A+ + ++IAQAQSGTGKTA F
Sbjct: 618 SSFRELR---LKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAF 674
Query: 397 SISILQQIDTSIRECQALILAPTRELAQQIQKVV 498
+++L +ID ++ Q + LAPT ELA+QI +VV
Sbjct: 675 VLTMLCRIDVNLMCPQCICLAPTLELAKQIGEVV 708
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 64.5 bits (150), Expect = 5e-11
Identities = 34/73 (46%), Positives = 47/73 (64%)
Frame = +1
Query: 289 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTR 468
G+ KPS IQQ A+ +QG+DVI A++G+GKT F+I +LQ + + L+L PTR
Sbjct: 63 GWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFAIPVLQSLLDHPQAFFCLVLTPTR 122
Query: 469 ELAQQIQKVVIAL 507
ELA QI + AL
Sbjct: 123 ELAFQIGQQFEAL 135
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 62.9 bits (146), Expect = 2e-10
Identities = 35/78 (44%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Frame = +1
Query: 271 RGIYAYGFEKPSAIQQRAIMPCIQ-GRDVIAQAQSGTGKTATFSISILQQID-TSIRECQ 444
+ I GF +P+ IQ++ I PCI G+DV+A +++G+GKTA F I +LQ++ +
Sbjct: 37 KAIEKKGFNQPTPIQRKTI-PCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIR 95
Query: 445 ALILAPTRELAQQIQKVV 498
AL+++PTRELA Q KVV
Sbjct: 96 ALMVSPTRELALQTFKVV 113
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 62.9 bits (146), Expect = 2e-10
Identities = 35/78 (44%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Frame = +1
Query: 271 RGIYAYGFEKPSAIQQRAIMPCIQ-GRDVIAQAQSGTGKTATFSISILQQID-TSIRECQ 444
+ I GF +P+ IQ++ I PCI G+DV+A +++G+GKTA F I +LQ++ +
Sbjct: 37 KAIEKKGFNQPTPIQRKTI-PCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIR 95
Query: 445 ALILAPTRELAQQIQKVV 498
AL+++PTRELA Q KVV
Sbjct: 96 ALMVSPTRELALQTFKVV 113
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 58.4 bits (135), Expect = 4e-09
Identities = 35/88 (39%), Positives = 57/88 (64%), Gaps = 10/88 (11%)
Frame = +1
Query: 259 EELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE 438
+E+ + + G+ +P+ IQ++AI +Q RDVI A++G+GKTA F + +L I TS+ +
Sbjct: 310 DEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVWI-TSLPK 368
Query: 439 CQ----------ALILAPTRELAQQIQK 492
+ A+I+APTRELAQQI++
Sbjct: 369 MERQEHRDLGPYAIIMAPTRELAQQIEE 396
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 57.2 bits (132), Expect = 8e-09
Identities = 37/102 (36%), Positives = 56/102 (54%), Gaps = 12/102 (11%)
Frame = +1
Query: 262 ELLRGIYAYGFEKPSAIQQRAIMPCIQGR-DVIAQAQSGTGKTATFSISILQQI------ 420
E+L I GF +P+ IQ + ++ R DV+ A++G+GKT F I ++ ++
Sbjct: 165 EVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDD 224
Query: 421 -----DTSIRECQALILAPTRELAQQIQKVVIALVIT*MLNA 531
T +R +ALI+APTREL QI K + AL+ T L A
Sbjct: 225 SQETESTEVRGPRALIVAPTRELVIQIMKHINALISTTQLIA 266
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 56.4 bits (130), Expect = 1e-08
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 3/81 (3%)
Frame = +1
Query: 262 ELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIR-- 435
++L+ G+ P+ IQQ I + G+D+ A A +GTGKTA F + IL+++ +
Sbjct: 158 QILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPILERMIYRPKGA 217
Query: 436 EC-QALILAPTRELAQQIQKV 495
C + L+L PTRELA Q+ +V
Sbjct: 218 SCTRVLVLVPTRELAIQVFQV 238
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 55.6 bits (128), Expect = 3e-08
Identities = 29/66 (43%), Positives = 40/66 (60%)
Frame = +1
Query: 310 IQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQ 489
+Q I ++G D++ A++GTGKT F+I ILQ++ ALIL PTRELA QI
Sbjct: 115 VQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIA 174
Query: 490 KVVIAL 507
+ AL
Sbjct: 175 EQFTAL 180
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 55.6 bits (128), Expect = 3e-08
Identities = 29/66 (43%), Positives = 40/66 (60%)
Frame = +1
Query: 310 IQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQ 489
+Q I ++G D++ A++GTGKT F+I ILQ++ ALIL PTRELA QI
Sbjct: 115 VQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKLSVDPYGIYALILTPTRELAFQIA 174
Query: 490 KVVIAL 507
+ AL
Sbjct: 175 EQFTAL 180
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 54.4 bits (125), Expect = 6e-08
Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 6/78 (7%)
Frame = +1
Query: 286 YG-FEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-----A 447
YG F+KP+ IQ + + GRD+I+ A++G+GKT F + L I +
Sbjct: 146 YGKFQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALVHITKQAHRQRGEGPAV 205
Query: 448 LILAPTRELAQQIQKVVI 501
L+L PTRELAQQ+Q+V I
Sbjct: 206 LVLLPTRELAQQVQEVSI 223
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 54.4 bits (125), Expect = 6e-08
Identities = 29/90 (32%), Positives = 55/90 (61%), Gaps = 7/90 (7%)
Frame = +1
Query: 259 EELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI------ 420
E +L+ I G+EK + +Q+ I ++ ++++ +A++G+GKT F I ++Q++
Sbjct: 98 ERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQKLIAESKT 157
Query: 421 -DTSIRECQALILAPTRELAQQIQKVVIAL 507
D S+ A+I+APT+EL QI K+ + L
Sbjct: 158 NDGSVGP-SAVIIAPTKELITQIYKLFVKL 186
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 54.0 bits (124), Expect = 8e-08
Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Frame = +1
Query: 262 ELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI--DTSIR 435
+++ + + + KP++IQ +AI + GRDVI A++G+GKT F + + + I +
Sbjct: 314 KMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHILDQPELE 373
Query: 436 ECQ---ALILAPTRELAQQIQK 492
E A+ILAPTRELA Q K
Sbjct: 374 EGDGPIAVILAPTRELAMQTYK 395
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 53.6 bits (123), Expect = 1e-07
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 11/78 (14%)
Frame = +1
Query: 289 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRECQ-------- 444
GFEKPS IQ + + G+D I +Q+G+GKT F + L ID + + +
Sbjct: 103 GFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPALLHIDAQLAQYEKNDEEQKP 162
Query: 445 ---ALILAPTRELAQQIQ 489
L+L+PTRELAQQI+
Sbjct: 163 SPFVLVLSPTRELAQQIE 180
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 53.6 bits (123), Expect = 1e-07
Identities = 29/86 (33%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Frame = +1
Query: 265 LLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATF---SISILQQIDTSIR 435
LL+ + GF + IQ ++I P ++G+DV+A A++G+GKT F +I +L +++
Sbjct: 79 LLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIELLHKLNWKQH 138
Query: 436 E-CQALILAPTRELAQQIQKVVIALV 510
+I++PTREL+ Q V+ L+
Sbjct: 139 NGTGVIIVSPTRELSMQTYGVLSELL 164
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 53.2 bits (122), Expect = 1e-07
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 12/97 (12%)
Frame = +1
Query: 277 IYAYGFEKPSAIQQRAIMPCIQGR-DVIAQAQSGTGKTATFSISILQQI----------- 420
I+ + F +P+ IQ + ++ R DV+ A++G+GKT F I ++ ++
Sbjct: 3 IFFFRFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLLESSDDSQETE 62
Query: 421 DTSIRECQALILAPTRELAQQIQKVVIALVIT*MLNA 531
T +R +ALI+APTREL QI K + AL+ T L A
Sbjct: 63 STEVRGPRALIVAPTRELVIQIMKHINALISTTQLIA 99
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 51.2 bits (117), Expect = 5e-07
Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Frame = +1
Query: 265 LLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATF----SISILQQIDTSI 432
L+ I +E+P+ IQ AI + GRDV+ A++G+GKTA + + I+ Q D
Sbjct: 276 LMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVHIMDQPDLKA 335
Query: 433 RECQ-ALILAPTRELAQQI 486
E A+I+ PTRELA Q+
Sbjct: 336 GEGPVAVIVVPTRELAIQV 354
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 51.2 bits (117), Expect = 5e-07
Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
Frame = +1
Query: 259 EELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI--DTSI 432
E + + + G+ K + IQQ A+ QG D++A AQ+G+GKTA F + I+ ++ D ++
Sbjct: 350 ETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNL 409
Query: 433 REC-------QALILAPTRELAQQI 486
+ +IL PTRELA QI
Sbjct: 410 NTAGEGGCYPRCIILTPTRELADQI 434
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 51.2 bits (117), Expect = 5e-07
Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
Frame = +1
Query: 259 EELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI--DTSI 432
E + + + G+ K + IQQ A+ QG D++A AQ+G+GKTA F + I+ ++ D ++
Sbjct: 350 ETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNL 409
Query: 433 REC-------QALILAPTRELAQQI 486
+ +IL PTRELA QI
Sbjct: 410 NTAGEGGCYPRCIILTPTRELADQI 434
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 51.2 bits (117), Expect = 5e-07
Identities = 31/85 (36%), Positives = 49/85 (57%), Gaps = 9/85 (10%)
Frame = +1
Query: 259 EELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI--DTSI 432
E + + + G+ K + IQQ A+ QG D++A AQ+G+GKTA F + I+ ++ D ++
Sbjct: 350 ETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTRLIDDNNL 409
Query: 433 REC-------QALILAPTRELAQQI 486
+ +IL PTRELA QI
Sbjct: 410 NTAGEGGCYPRCIILTPTRELADQI 434
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 49.2 bits (112), Expect = 2e-06
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 9/95 (9%)
Frame = +1
Query: 229 CRNLR*HEPKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 408
C++ + + + R + G+ + + IQQ + G+D++A AQ+G+GKTA F + I
Sbjct: 297 CKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPI 356
Query: 409 LQQI----DTSIRE---C--QALILAPTRELAQQI 486
+ ++ D + C + +IL PTRELA QI
Sbjct: 357 MSRLILEKDLNYGAEGGCYPRCIILTPTRELADQI 391
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 49.2 bits (112), Expect = 2e-06
Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 9/95 (9%)
Frame = +1
Query: 229 CRNLR*HEPKEELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISI 408
C++ + + + R + G+ + + IQQ + G+D++A AQ+G+GKTA F + I
Sbjct: 297 CKSFSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPI 356
Query: 409 LQQI----DTSIRE---C--QALILAPTRELAQQI 486
+ ++ D + C + +IL PTRELA QI
Sbjct: 357 MSRLILEKDLNYGAEGGCYPRCIILTPTRELADQI 391
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 49.2 bits (112), Expect = 2e-06
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 15/91 (16%)
Frame = +1
Query: 265 LLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI-------- 420
++ + G+ KP+ +Q+ +I + RD+++ AQ+G+GKTA F + I+Q I
Sbjct: 150 VMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMV 209
Query: 421 ----DTSIRECQ---ALILAPTRELAQQIQK 492
T+ R AL+L+PTRELA QI K
Sbjct: 210 KPPAFTNGRRTYYPCALVLSPTRELAIQIHK 240
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 49.2 bits (112), Expect = 2e-06
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 15/91 (16%)
Frame = +1
Query: 265 LLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI-------- 420
++ + G+ KP+ +Q+ +I + RD+++ AQ+G+GKTA F + I+Q I
Sbjct: 134 VMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMV 193
Query: 421 ----DTSIRECQ---ALILAPTRELAQQIQK 492
T+ R AL+L+PTRELA QI K
Sbjct: 194 KPPAFTNGRRTYYPCALVLSPTRELAIQIHK 224
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 49.2 bits (112), Expect = 2e-06
Identities = 32/91 (35%), Positives = 51/91 (56%), Gaps = 15/91 (16%)
Frame = +1
Query: 265 LLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI-------- 420
++ + G+ KP+ +Q+ +I + RD+++ AQ+G+GKTA F + I+Q I
Sbjct: 131 VMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQHILAGGPDMV 190
Query: 421 ----DTSIRECQ---ALILAPTRELAQQIQK 492
T+ R AL+L+PTRELA QI K
Sbjct: 191 KPPAFTNGRRTYYPCALVLSPTRELAIQIHK 221
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 46.4 bits (105), Expect = 2e-05
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Frame = +1
Query: 259 EELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI--DTSI 432
E + + + G+ K + IQQ + QG D++A AQ+G+GKTA F + I+ ++ + +
Sbjct: 561 ETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDL 620
Query: 433 REC-------QALILAPTRELAQQI 486
+ +IL PTREL QI
Sbjct: 621 NTAGEGGCYPRCIILTPTRELTDQI 645
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 46.4 bits (105), Expect = 2e-05
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Frame = +1
Query: 259 EELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI--DTSI 432
E + + + G+ K + IQQ + QG D++A AQ+G+GKTA F + I+ ++ + +
Sbjct: 561 ETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDL 620
Query: 433 REC-------QALILAPTRELAQQI 486
+ +IL PTREL QI
Sbjct: 621 NTAGEGGCYPRCIILTPTRELTDQI 645
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 46.4 bits (105), Expect = 2e-05
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Frame = +1
Query: 289 GFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISIL-----QQIDTSIRECQ--- 444
G P+AIQ + I + GRD+I A +G+GKT TF + ++ Q++ +
Sbjct: 209 GIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVMFCLEQEMKLPFMRSEGPF 268
Query: 445 ALILAPTRELAQQIQKVVIAL 507
LI+ P+RELA+QI ++I +
Sbjct: 269 GLIIVPSRELARQIFDLIIEM 289
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 46.4 bits (105), Expect = 2e-05
Identities = 28/85 (32%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Frame = +1
Query: 259 EELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI--DTSI 432
E + + + G+ K + IQQ + QG D++A AQ+G+GKTA F + I+ ++ + +
Sbjct: 561 ETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMARLIDENDL 620
Query: 433 REC-------QALILAPTRELAQQI 486
+ +IL PTREL QI
Sbjct: 621 NTAGEGGCYPRCIILTPTRELTDQI 645
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 45.6 bits (103), Expect = 3e-05
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 10/73 (13%)
Frame = +1
Query: 310 IQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI-----DTSIRECQ-----ALILA 459
IQ I + G DV+ QA++ GKTA F + I+ +I +T + Q ALILA
Sbjct: 407 IQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPIIDKILRMDEETRNKARQDDGPLALILA 466
Query: 460 PTRELAQQIQKVV 498
PTRELA QI + +
Sbjct: 467 PTRELAAQIHEAL 479
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 45.2 bits (102), Expect = 4e-05
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 4/84 (4%)
Frame = +1
Query: 268 LRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE--- 438
L G+ + KP+ IQ+ I + G DV+ A++G+GKT I +L+ + +
Sbjct: 88 LEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEALWRAKWSPDY 147
Query: 439 -CQALILAPTRELAQQIQKVVIAL 507
ALI++PTRELA Q + A+
Sbjct: 148 GLGALIISPTRELALQTFSTINAV 171
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 43.6 bits (98), Expect = 1e-04
Identities = 35/93 (37%), Positives = 57/93 (61%), Gaps = 17/93 (18%)
Frame = +1
Query: 259 EELLRGIYAYGFEKPSAIQQRAIMPCIQG-RDVIAQAQSGTGKTATFSI----SILQQ-- 417
E + I G+++P+ +Q+ +I P +QG RD+++ AQ+G+GKTA F + +ILQ
Sbjct: 175 EWIEENIKTAGYDRPTPVQKYSI-PALQGGRDLMSCAQTGSGKTAAFLVPLVNAILQDGP 233
Query: 418 --IDTSI-----RECQ---ALILAPTRELAQQI 486
+ S+ R+ Q AL+L+PTREL+ QI
Sbjct: 234 DAVHRSVTSSGGRKKQYPSALVLSPTRELSLQI 266
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 42.3 bits (95), Expect = 3e-04
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 10/83 (12%)
Frame = +1
Query: 265 LLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI-------- 420
LL + +PS IQ ++I + R+V+A A +G+GKT F++ ++ +I
Sbjct: 137 LLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALPVIDEILELKQRAD 196
Query: 421 --DTSIRECQALILAPTRELAQQ 483
++ + A++L PTRELA Q
Sbjct: 197 YSSSNSSKLLAVVLEPTRELAAQ 219
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 41.5 bits (93), Expect = 4e-04
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 10/72 (13%)
Frame = +1
Query: 298 KPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI------DTSIRE----CQA 447
+P+ IQ+ + P + G DV+A A +G+GKT F I + ++ D + + +
Sbjct: 758 RPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRL 817
Query: 448 LILAPTRELAQQ 483
LI+APTREL Q
Sbjct: 818 LIVAPTRELVNQ 829
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line
helicase protein 4 protein.
Length = 1156
Score = 41.5 bits (93), Expect = 4e-04
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 10/72 (13%)
Frame = +1
Query: 298 KPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQI------DTSIRE----CQA 447
+P+ IQ+ + P + G DV+A A +G+GKT F I + ++ D + + +
Sbjct: 758 RPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIPFVIKLMEEFEKDRDVTDEKPSPRL 817
Query: 448 LILAPTRELAQQ 483
LI+APTREL Q
Sbjct: 818 LIVAPTRELVNQ 829
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 39.1 bits (87), Expect = 0.002
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +1
Query: 262 ELLRGIYAYGFEKPSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 414
EL + + + P+A+Q AI + G D + A++G+GKT FS+ I Q
Sbjct: 12 ELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLPIAQ 62
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 38.3 bits (85), Expect = 0.004
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 3/53 (5%)
Frame = +1
Query: 349 DVIAQAQSGTGKTATFSISILQQIDTSI---RECQALILAPTRELAQQIQKVV 498
DV+ ++ +G+GKT F + +++ I + + ALIL+P+REL QI V+
Sbjct: 48 DVVVESPTGSGKTLAFVLPMMRMIQNAKLQPADIGALILSPSRELCSQIVSVI 100
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 34.3 bits (75), Expect = 0.067
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +1
Query: 301 PSAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTS-IRECQALILAPTRELA 477
PS + P ++ RDV A +G+GKT + + +L + + + QA+IL P + L
Sbjct: 142 PSLFFEIRSPPPLRPRDVAIAAPTGSGKTICYVLPVLAAVGSKPSKILQAVILVPVQTLV 201
Query: 478 QQI 486
QI
Sbjct: 202 AQI 204
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 31.9 bits (69), Expect = 0.36
Identities = 17/67 (25%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +1
Query: 289 GFEKPSAIQQRAIMPCIQGRD-VIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPT 465
GF+ + IQ + + + VI A +G+GKTA +++L+ + + E +A+ + P
Sbjct: 1318 GFKVFNPIQTQVFRTVFESNENVIVCAPNGSGKTAIAELAVLRHFENT-PEAKAVYITPM 1376
Query: 466 RELAQQI 486
++A ++
Sbjct: 1377 EDMATKV 1383
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 31.1 bits (67), Expect = 0.62
Identities = 13/37 (35%), Positives = 23/37 (62%)
Frame = +1
Query: 304 SAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 414
+A+QQ +I +GR ++ +A +G GKT F I ++
Sbjct: 117 NAVQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIE 153
>U00033-1|AAC48292.3| 731|Caenorhabditis elegans Hypothetical
protein F37C12.7 protein.
Length = 731
Score = 31.1 bits (67), Expect = 0.62
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Frame = +2
Query: 68 YITFVSPTPRIESGL*MSEDWPEDSKNGPSKD-QG-SYDGPPGMDPGTLDTDWDQVVETF 241
Y F SPT ++ + +W +D ++GP ++ QG + + PG D T+D W + VE +
Sbjct: 50 YQLFNSPTEKLRKSERVKANWVDD-RDGPIRNIQGHASETFPGKD--TVDKVWRKCVELY 106
Query: 242 DD 247
D+
Sbjct: 107 DE 108
>AL132948-12|CAD31814.1| 283|Caenorhabditis elegans Hypothetical
protein Y39B6A.16 protein.
Length = 283
Score = 30.7 bits (66), Expect = 0.82
Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Frame = +3
Query: 51 HVFFINILHLCRPPQE--LKVVYKCQKIGQRIPKMG 152
H+F I LC PP+E LK + +C K RI KMG
Sbjct: 26 HMFCIECERLCHPPEEEPLKCI-QCSKTPIRIVKMG 60
>AF003740-7|AAC48142.2| 625|Caenorhabditis elegans Hypothetical
protein C41D11.7 protein.
Length = 625
Score = 30.3 bits (65), Expect = 1.1
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +1
Query: 352 VIAQAQSGTGKTATFSISILQQIDTSIRECQALILAPTRELAQQIQ 489
V Q GTGKT T ++ + + I ++ Q ++LAPTRE I+
Sbjct: 85 VCIQGPPGTGKTFTLTLLLCRLIQ---QKKQVVVLAPTREALANIR 127
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 310 IQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQ 414
+QQ +I +GR ++ +A +G GKT F I ++
Sbjct: 19 VQQMSIQVIREGRGLVVEAPTGIGKTYAFLIPAIE 53
>U80437-18|AAB37629.1| 518|Caenorhabditis elegans Cell division
cycle related protein6 protein.
Length = 518
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 352 VIAQAQSGTGKTATFSISILQQIDTSIREC 441
+ Q GTGKTAT ++ +L+ + S+R C
Sbjct: 198 IYVSGQPGTGKTAT-TMRVLKSLGKSVRSC 226
>U80024-6|AAW88410.1| 300|Caenorhabditis elegans Serpentine
receptor, class bc (class b-like) protein 8 protein.
Length = 300
Score = 28.3 bits (60), Expect = 4.4
Identities = 12/28 (42%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = -1
Query: 301 VFQNHRRICLSTILLWVHVIEG-FDNLI 221
+F NHR +C S ++L + G F+NLI
Sbjct: 121 MFHNHRHLCPSILILMFSIFMGLFENLI 148
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 27.9 bits (59), Expect = 5.8
Identities = 14/45 (31%), Positives = 26/45 (57%)
Frame = +1
Query: 304 SAIQQRAIMPCIQGRDVIAQAQSGTGKTATFSISILQQIDTSIRE 438
+A+QQ++I R ++ A +G GKT F ++ I+ ++RE
Sbjct: 116 NAVQQKSIQAIRDRRGLLVDAPTGIGKTYAF---LIPAIEIALRE 157
>Z68006-8|CAA91999.1| 1328|Caenorhabditis elegans Hypothetical
protein K09C8.5 protein.
Length = 1328
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -3
Query: 311 IAEGFSKP*AYMPLNNSSLGSCHRRFRQLDPSRC 210
I G +KP YMP S C R F + +P +C
Sbjct: 872 IVSGANKP--YMPFEKDSDMDCRRNFSRENPIKC 903
>Z68005-6|CAA91994.1| 1328|Caenorhabditis elegans Hypothetical
protein K09C8.5 protein.
Length = 1328
Score = 27.5 bits (58), Expect = 7.7
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = -3
Query: 311 IAEGFSKP*AYMPLNNSSLGSCHRRFRQLDPSRC 210
I G +KP YMP S C R F + +P +C
Sbjct: 872 IVSGANKP--YMPFEKDSDMDCRRNFSRENPIKC 903
>Z48544-1|CAA88435.1| 473|Caenorhabditis elegans Hypothetical
protein ZK945.1 protein.
Length = 473
Score = 27.5 bits (58), Expect = 7.7
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -1
Query: 463 WEPGSKLDIHECLYRFVVESI*RK 392
WEPG+K H Y ++V+ I R+
Sbjct: 210 WEPGTKSGYHAITYGWIVDQIVRR 233
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,572,035
Number of Sequences: 27780
Number of extensions: 360315
Number of successful extensions: 1100
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 1002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1070
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1268802960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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