Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00641
         (526 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          24   0.94 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   1.2  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   2.9  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   5.0  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   6.7  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     21   8.8  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   8.8  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   8.8  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   8.8  
AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory recept...    21   8.8  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   8.8  
AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450 ...    21   8.8  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    21   8.8  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   8.8  

>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 23.8 bits (49), Expect = 0.94
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = +2

Query: 266 NNSREGIVNSLSLFVTWRALTVRLPVFILKSEATTCPLCPSVL 394
           +N +    N  S  + W AL  +  VFI K       +CPS+L
Sbjct: 210 DNLQYSFDNQCSGTIDW-ALPNKRTVFIRKGGTAKASMCPSLL 251


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -2

Query: 357 DLSMKTGNLTVNALQVTNK 301
           D+ ++ G LT+N +Q TN+
Sbjct: 752 DIKVEDGTLTINNIQKTNE 770


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +2

Query: 254 NHGFNNSREGIVNSLSLFVTWRALTV 331
           N   N S+ GIV +++ FV +  LT+
Sbjct: 29  NSNVNYSKIGIVQTVAYFVIFIILTI 54


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +2

Query: 341 VFILKSEATTCPLCPSVLLLTH 406
           V I + +  TCP CP +    H
Sbjct: 223 VHIREDKRLTCPKCPFITEYKH 244


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -2

Query: 255 FMSHFYLHNHGEDYLH 208
           F  HF +HN G  + H
Sbjct: 163 FRYHFNVHNSGTHFWH 178


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +1

Query: 346 HTQIRSHYLPPV 381
           H Q+ SH+ PP+
Sbjct: 86  HPQLHSHHGPPI 97


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +1

Query: 346 HTQIRSHYLPPV 381
           H Q+ SH+ PP+
Sbjct: 86  HPQLHSHHGPPI 97


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 6/22 (27%), Positives = 14/22 (63%)
 Frame = -2

Query: 516 ISLLTYTEIRDISQSAFWDLSL 451
           ++  +Y  + D+S+  F+D+ L
Sbjct: 112 VTTCSYYSLDDLSEDTFYDIRL 133


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 276 RELLKPWFMSHFYLHNHGEDYLHHFQH 196
           +E+L+ +   HF     GED + H  H
Sbjct: 369 KEVLRLYPSVHFISRKLGEDLVTHSGH 395


>AM292349-1|CAL23161.1|  248|Tribolium castaneum gustatory receptor
           candidate 28 protein.
          Length = 248

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -2

Query: 219 DYLHHFQHLITSCFFSFIEFGSI 151
           D++H +  + T  F+    FGSI
Sbjct: 108 DFVHFYYPVATMSFYVLNFFGSI 130


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +1

Query: 346 HTQIRSHYLPPV 381
           H Q+ SH+ PP+
Sbjct: 86  HPQLHSHHGPPI 97


>AF254755-1|AAF70496.1|  505|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q7 protein.
          Length = 505

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = -2

Query: 276 RELLKPWFMSHFYLHNHGEDYLHHFQH 196
           +E+L+ +   HF     GED + H  H
Sbjct: 369 KEVLRLYPSVHFISRKLGEDLVTHSGH 395


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +1

Query: 346 HTQIRSHYLPPV 381
           H Q+ SH+ PP+
Sbjct: 86  HPQLHSHHGPPI 97


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 20.6 bits (41), Expect = 8.8
 Identities = 9/11 (81%), Positives = 10/11 (90%)
 Frame = +1

Query: 130 SALESPDYASK 162
           SALESPD AS+
Sbjct: 226 SALESPDPASR 236


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,173
Number of Sequences: 336
Number of extensions: 2573
Number of successful extensions: 14
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12678017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)