Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00641
(526 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U47924-16|AAB51329.1| 126|Homo sapiens C10 protein. 48 2e-05
BC009925-1|AAH09925.1| 126|Homo sapiens chromosome 12 open read... 48 2e-05
BC129990-1|AAI29991.1| 695|Homo sapiens nuclear fragile X menta... 30 4.3
BC129989-1|AAI29990.1| 120|Homo sapiens NUFIP2 protein protein. 30 4.3
BC108307-1|AAI08308.1| 695|Homo sapiens nuclear fragile X menta... 30 4.3
AY232289-1|AAP69984.1| 695|Homo sapiens proliferation-inducing ... 30 4.3
AJ493465-1|CAD38278.1| 695|Homo sapiens FMRP interacting protei... 30 4.3
AB037742-1|BAA92559.1| 714|Homo sapiens KIAA1321 protein protein. 30 4.3
BX640827-1|CAE45903.1| 1083|Homo sapiens hypothetical protein pr... 30 5.7
AF530058-1|AAQ09942.1| 912|Homo sapiens HBeAg-binding protein 3... 30 5.7
AF506799-1|AAO15881.1| 1113|Homo sapiens KIBRA protein protein. 30 5.7
AB020676-1|BAA74892.1| 888|Homo sapiens KIAA0869 protein protein. 30 5.7
BC040879-1|AAH40879.1| 493|Homo sapiens adhesion molecule with ... 29 7.6
AY237007-1|AAO48948.1| 493|Homo sapiens transmembrane protein A... 29 7.6
AL355145-6|CAI22942.1| 493|Homo sapiens adhesion molecule with ... 29 7.6
AB032989-1|BAA86477.1| 437|Homo sapiens KIAA1163 protein protein. 29 7.6
>U47924-16|AAB51329.1| 126|Homo sapiens C10 protein.
Length = 126
Score = 48.4 bits (110), Expect = 2e-05
Identities = 27/87 (31%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Frame = +1
Query: 133 ALESPDYASKLDEAKEAAGNEMLKMMQIVFPMVVQI--EMGHKPWLQ*FS*RHSQFTQLI 306
A +P+ A ++DEA++ A N+M KM+Q V P+ QI E+ +F +L+
Sbjct: 26 AFSAPENAVRMDEARDNACNDMGKMLQFVLPVATQIQQEVIKAYGFSCDGEGVLKFARLV 85
Query: 307 RDLESIDGEVARLHTQIRSHYLPPVSI 387
+ E+ D E+A L ++++ +LPP+++
Sbjct: 86 KSYEAQDPEIASLSGKLKALFLPPMTL 112
>BC009925-1|AAH09925.1| 126|Homo sapiens chromosome 12 open reading
frame 57 protein.
Length = 126
Score = 48.4 bits (110), Expect = 2e-05
Identities = 27/87 (31%), Positives = 51/87 (58%), Gaps = 2/87 (2%)
Frame = +1
Query: 133 ALESPDYASKLDEAKEAAGNEMLKMMQIVFPMVVQI--EMGHKPWLQ*FS*RHSQFTQLI 306
A +P+ A ++DEA++ A N+M KM+Q V P+ QI E+ +F +L+
Sbjct: 26 AFSAPENAVRMDEARDNACNDMGKMLQFVLPVATQIQQEVIKAYGFSCDGEGVLKFARLV 85
Query: 307 RDLESIDGEVARLHTQIRSHYLPPVSI 387
+ E+ D E+A L ++++ +LPP+++
Sbjct: 86 KSYEAQDPEIASLSGKLKALFLPPMTL 112
>BC129990-1|AAI29991.1| 695|Homo sapiens nuclear fragile X mental
retardation protein interacting protein 2 protein.
Length = 695
Score = 30.3 bits (65), Expect = 4.3
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = -2
Query: 282 PSRELLKPWFMSHFYLHNHGEDYLHHFQH 196
P ++ +P H+Y +NH ++ HH H
Sbjct: 23 PQQQQQQPHHHHHYYFYNHSHNHHHHHHH 51
>BC129989-1|AAI29990.1| 120|Homo sapiens NUFIP2 protein protein.
Length = 120
Score = 30.3 bits (65), Expect = 4.3
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = -2
Query: 282 PSRELLKPWFMSHFYLHNHGEDYLHHFQH 196
P ++ +P H+Y +NH ++ HH H
Sbjct: 23 PQQQQQQPHHHHHYYFYNHSHNHHHHHHH 51
>BC108307-1|AAI08308.1| 695|Homo sapiens nuclear fragile X mental
retardation protein interacting protein 2 protein.
Length = 695
Score = 30.3 bits (65), Expect = 4.3
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = -2
Query: 282 PSRELLKPWFMSHFYLHNHGEDYLHHFQH 196
P ++ +P H+Y +NH ++ HH H
Sbjct: 23 PQQQQQQPHHHHHYYFYNHSHNHHHHHHH 51
>AY232289-1|AAP69984.1| 695|Homo sapiens proliferation-inducing
gene 1 protein.
Length = 695
Score = 30.3 bits (65), Expect = 4.3
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = -2
Query: 282 PSRELLKPWFMSHFYLHNHGEDYLHHFQH 196
P ++ +P H+Y +NH ++ HH H
Sbjct: 23 PQQQQQQPHHHHHYYFYNHSHNHHHHHHH 51
>AJ493465-1|CAD38278.1| 695|Homo sapiens FMRP interacting protein,
82kD protein.
Length = 695
Score = 30.3 bits (65), Expect = 4.3
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = -2
Query: 282 PSRELLKPWFMSHFYLHNHGEDYLHHFQH 196
P ++ +P H+Y +NH ++ HH H
Sbjct: 23 PQQQQQQPHHHHHYYFYNHSHNHHHHHHH 51
>AB037742-1|BAA92559.1| 714|Homo sapiens KIAA1321 protein protein.
Length = 714
Score = 30.3 bits (65), Expect = 4.3
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = -2
Query: 282 PSRELLKPWFMSHFYLHNHGEDYLHHFQH 196
P ++ +P H+Y +NH ++ HH H
Sbjct: 42 PQQQQQQPHHHHHYYFYNHSHNHHHHHHH 70
>BX640827-1|CAE45903.1| 1083|Homo sapiens hypothetical protein
protein.
Length = 1083
Score = 29.9 bits (64), Expect = 5.7
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 283 HSQFTQLIRDLESIDGEVARLHTQIRSHYLPPVSISS 393
+S+ QL+R+LE +VA LH+Q++S S+SS
Sbjct: 364 NSKRNQLVRELEEATRQVATLHSQLKSLSSSMQSLSS 400
>AF530058-1|AAQ09942.1| 912|Homo sapiens HBeAg-binding protein 3
protein.
Length = 912
Score = 29.9 bits (64), Expect = 5.7
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 283 HSQFTQLIRDLESIDGEVARLHTQIRSHYLPPVSISS 393
+S+ QL+R+LE +VA LH+Q++S S+SS
Sbjct: 198 NSKRNQLVRELEEATRQVATLHSQLKSLSSSMQSLSS 234
>AF506799-1|AAO15881.1| 1113|Homo sapiens KIBRA protein protein.
Length = 1113
Score = 29.9 bits (64), Expect = 5.7
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 283 HSQFTQLIRDLESIDGEVARLHTQIRSHYLPPVSISS 393
+S+ QL+R+LE +VA LH+Q++S S+SS
Sbjct: 399 NSKRNQLVRELEEATRQVATLHSQLKSLSSSMQSLSS 435
>AB020676-1|BAA74892.1| 888|Homo sapiens KIAA0869 protein protein.
Length = 888
Score = 29.9 bits (64), Expect = 5.7
Identities = 15/37 (40%), Positives = 24/37 (64%)
Frame = +1
Query: 283 HSQFTQLIRDLESIDGEVARLHTQIRSHYLPPVSISS 393
+S+ QL+R+LE +VA LH+Q++S S+SS
Sbjct: 175 NSKRNQLVRELEEATRQVATLHSQLKSLSSSMQSLSS 211
>BC040879-1|AAH40879.1| 493|Homo sapiens adhesion molecule with
Ig-like domain 1 protein.
Length = 493
Score = 29.5 bits (63), Expect = 7.6
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2
Query: 309 TNKLSELTMPSRELLKPWFMSHFYLHNH 226
+NKL L +P + L W + YLHN+
Sbjct: 194 SNKLKNLPLPDLQKLPAWIKNGLYLHNN 221
>AY237007-1|AAO48948.1| 493|Homo sapiens transmembrane protein
AMIGO protein.
Length = 493
Score = 29.5 bits (63), Expect = 7.6
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2
Query: 309 TNKLSELTMPSRELLKPWFMSHFYLHNH 226
+NKL L +P + L W + YLHN+
Sbjct: 194 SNKLKNLPLPDLQKLPAWIKNGLYLHNN 221
>AL355145-6|CAI22942.1| 493|Homo sapiens adhesion molecule with
Ig-like domain 1 protein.
Length = 493
Score = 29.5 bits (63), Expect = 7.6
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2
Query: 309 TNKLSELTMPSRELLKPWFMSHFYLHNH 226
+NKL L +P + L W + YLHN+
Sbjct: 194 SNKLKNLPLPDLQKLPAWIKNGLYLHNN 221
>AB032989-1|BAA86477.1| 437|Homo sapiens KIAA1163 protein protein.
Length = 437
Score = 29.5 bits (63), Expect = 7.6
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -2
Query: 309 TNKLSELTMPSRELLKPWFMSHFYLHNH 226
+NKL L +P + L W + YLHN+
Sbjct: 138 SNKLKNLPLPDLQKLPAWIKNGLYLHNN 165
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,024,317
Number of Sequences: 237096
Number of extensions: 1533486
Number of successful extensions: 7259
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 7129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7254
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5046825278
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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