Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00640
         (618 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    27   0.64 
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    26   1.1  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    24   4.5  
AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic pr...    23   6.0  
AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.         23   7.9  

>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 26.6 bits (56), Expect = 0.64
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +1

Query: 160  ALYRGGLTKGSSQTRLCPGRRISNSRRQSTTLGSRRRR-DHLGDSGH*NIEKYIGNS 327
            +L  G  T+G+         R    RR+S+ L ++ R   H G SG  +I   +GNS
Sbjct: 1065 SLAGGKATQGTGTANGGDAARDVRERRKSSLLSTQEREGSHCGVSGGGSISLAVGNS 1121


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 25.8 bits (54), Expect = 1.1
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
 Frame = +1

Query: 160  ALYRGGLTKGSSQTRLCPGRRISNSRRQSTTLGSRRRR-DHLGDSGH*NIEKYIGNS 327
            +L  G  T+G+         R    RR+S+ L ++ R   H G SG  +I   +GNS
Sbjct: 1063 SLAGGKATQGTGTADGGDAARDVRERRKSSLLSTQEREGSHCGVSGGGSISLAVGNS 1119


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 23.8 bits (49), Expect = 4.5
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +3

Query: 108 PEHDKGLLSDTFWRTPQRAVPGRPYQRVIPNE 203
           P ++   ++DT  R    +V   P+QR+I N+
Sbjct: 40  PNNNSNWVTDTTGRVAVVSVGDYPFQRIIDNQ 71


>AY578800-1|AAT07305.1|  379|Anopheles gambiae decapentaplegic
           protein.
          Length = 379

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -2

Query: 197 WDDPLVRPPRYSALRC 150
           W+D +V PP Y A  C
Sbjct: 292 WNDWIVAPPGYEAYYC 307


>AY578797-1|AAT07302.1|  304|Anopheles gambiae activin protein.
          Length = 304

 Score = 23.0 bits (47), Expect = 7.9
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 203 LVWDDPLVRPPRYSALRC 150
           L WDD ++RP  Y A  C
Sbjct: 192 LKWDDWIIRPHGYYANYC 209


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 559,389
Number of Sequences: 2352
Number of extensions: 9602
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)