Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00639
         (727 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          23   2.5  
AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    23   3.3  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    23   3.3  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   4.4  
Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor ...    22   5.8  
DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory pro...    22   5.8  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   5.8  
AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical pro...    22   5.8  

>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 7/28 (25%), Positives = 18/28 (64%)
 Frame = +1

Query: 76  ESSHDLCESLKIDYDDQTNEWLNEVKPN 159
           ++S+  C++L+  +D+Q +  ++   PN
Sbjct: 203 DNSYQFCDNLQYSFDNQCSGTIDWALPN 230


>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 407 WIKEHVIEVIQIYTSRH 357
           W +EHV + I + T +H
Sbjct: 39  WTREHVAQWINLVTQQH 55


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 407 WIKEHVIEVIQIYTSRH 357
           W +EHV + I + T +H
Sbjct: 39  WTREHVAQWINLVTQQH 55


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 7/30 (23%), Positives = 18/30 (60%)
 Frame = +1

Query: 76  ESSHDLCESLKIDYDDQTNEWLNEVKPNAE 165
           ++S+  C++L+  +D+Q +  ++   P  E
Sbjct: 194 DNSYQFCDNLQYSFDNQCSGTIDWALPKQE 223


>Z69735-1|CAA93623.1|  162|Tribolium castaneum initiation factor
           5-like protein protein.
          Length = 162

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 10/31 (32%), Positives = 16/31 (51%)
 Frame = +1

Query: 97  ESLKIDYDDQTNEWLNEVKPNAEKLRQHKLS 189
           E+ K   DD+ +EW  +V   A + R   L+
Sbjct: 107 ENSKNGDDDEGHEWQADVSEEAVRARMQDLT 137


>DQ855498-1|ABH88185.1|  127|Tribolium castaneum chemosensory
           protein 12 protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/16 (43%), Positives = 14/16 (87%)
 Frame = +2

Query: 131 MSGLMKLNQMLKNYVN 178
           ++ ++K +++LKNYVN
Sbjct: 31  LNQILKSDRLLKNYVN 46


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +3

Query: 423 FQDPEISAAFKDVTSNPANFI 485
           F+ P+I  AF + T  P N +
Sbjct: 411 FEPPQIRHAFNEETVQPGNSV 431


>AJ973445-1|CAJ01492.1|  127|Tribolium castaneum hypothetical
           protein protein.
          Length = 127

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 7/16 (43%), Positives = 14/16 (87%)
 Frame = +2

Query: 131 MSGLMKLNQMLKNYVN 178
           ++ ++K +++LKNYVN
Sbjct: 31  LNQILKSDRLLKNYVN 46


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,370
Number of Sequences: 336
Number of extensions: 2924
Number of successful extensions: 14
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)