Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00638
         (739 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    23   1.9  
S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subu...    23   2.6  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    23   3.4  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    23   3.4  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    22   4.5  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    21   7.9  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.9  

>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/42 (23%), Positives = 21/42 (50%)
 Frame = -2

Query: 318 IFITNCAIINYSNCTNSWKNYHFNISVPKAVALIKHMCPLSR 193
           +F+    + + ++C N W    FN  +P+   L++H    S+
Sbjct: 300 VFVILTLLYSLNSCVNPWIYLAFNRELPR--LLLRHYTASSK 339


>S78567-1|AAB34900.1|  141|Tribolium castaneum GABA receptor subunit
           protein.
          Length = 141

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 111 LLNHQNKARRINSTTGNF 164
           +L H+ +A  I+ TTGN+
Sbjct: 37  VLGHRQRAMEISLTTGNY 54


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
          optomotor-blind-like protein protein.
          Length = 143

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 14 DHCIYKFHNNK 46
          D C YKFHN++
Sbjct: 29 DDCRYKFHNSR 39


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
          optomotor-blind-like protein protein.
          Length = 134

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 14 DHCIYKFHNNK 46
          D C YKFHN++
Sbjct: 29 DDCRYKFHNSR 39


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 111 LLNHQNKARRINSTTGNF 164
           +L H+ +A  I+ TTGN+
Sbjct: 219 VLGHRRRAVEISLTTGNY 236


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -2

Query: 459 VLIKYLVGWFLDC 421
           V+I ++  W+LDC
Sbjct: 497 VIISHVDAWYLDC 509


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = -2

Query: 552 HLYPTGVEINFALLFTYCSSY 490
           + Y   +  N  LLF  CS Y
Sbjct: 58  YFYCVSITFNVHLLFLLCSGY 78


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,086
Number of Sequences: 336
Number of extensions: 3145
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19779950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)