Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00638
(739 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 25 0.98
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 3.0
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 23 3.0
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 23 4.0
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 22 5.2
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 22 5.2
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 22 5.2
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 22 5.2
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 22 5.2
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 22 5.2
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 22 5.2
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 22 5.2
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 22 6.9
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 21 9.1
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 24.6 bits (51), Expect = 0.98
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 291 NYSNCTNSWKNYHFNIS 241
NY+N N++K H+NI+
Sbjct: 323 NYNNYNNNYKPLHYNIN 339
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.0 bits (47), Expect = 3.0
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 111 LLNHQNKARRINSTTGNF 164
+L H+ +A I+ TTGN+
Sbjct: 190 VLGHRQRAMEISLTTGNY 207
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 23.0 bits (47), Expect = 3.0
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = +3
Query: 111 LLNHQNKARRINSTTGNF 164
+L H+ +A I+ TTGN+
Sbjct: 129 VLGHRQRAMEISLTTGNY 146
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 22.6 bits (46), Expect = 4.0
Identities = 6/17 (35%), Positives = 11/17 (64%)
Frame = +2
Query: 2 GTRIDHCIYKFHNNKNW 52
GT++ CI++ N + W
Sbjct: 492 GTKMQFCIFRTANGRGW 508
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.2 bits (45), Expect = 5.2
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -2
Query: 291 NYSNCTNSWKNYHFNIS 241
NY+N N++K ++NI+
Sbjct: 90 NYNNYNNNYKPLYYNIN 106
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.2 bits (45), Expect = 5.2
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -2
Query: 291 NYSNCTNSWKNYHFNIS 241
NY+N N++K ++NI+
Sbjct: 90 NYNNYNNNYKPLYYNIN 106
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.2 bits (45), Expect = 5.2
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -2
Query: 291 NYSNCTNSWKNYHFNIS 241
NY+N N++K ++NI+
Sbjct: 90 NYNNYNNNYKPLYYNIN 106
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 22.2 bits (45), Expect = 5.2
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -2
Query: 291 NYSNCTNSWKNYHFNIS 241
NY+N N++K ++NI+
Sbjct: 90 NYNNYNNNYKPLYYNIN 106
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 5.2
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -2
Query: 291 NYSNCTNSWKNYHFNIS 241
NY+N N++K ++NI+
Sbjct: 323 NYNNYNNNYKPLYYNIN 339
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 5.2
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -2
Query: 291 NYSNCTNSWKNYHFNIS 241
NY+N N++K ++NI+
Sbjct: 323 NYNNYNNNYKPLYYNIN 339
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.2 bits (45), Expect = 5.2
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -2
Query: 291 NYSNCTNSWKNYHFNIS 241
NY+N N++K ++NI+
Sbjct: 323 NYNNYNNNYKPLYYNIN 339
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.2 bits (45), Expect = 5.2
Identities = 7/17 (41%), Positives = 13/17 (76%)
Frame = -2
Query: 291 NYSNCTNSWKNYHFNIS 241
NY+N N++K ++NI+
Sbjct: 312 NYNNYNNNYKPLYYNIN 328
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.8 bits (44), Expect = 6.9
Identities = 7/16 (43%), Positives = 12/16 (75%)
Frame = -2
Query: 291 NYSNCTNSWKNYHFNI 244
NY+N N++K ++NI
Sbjct: 323 NYNNYNNNYKPLYYNI 338
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 21.4 bits (43), Expect = 9.1
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +2
Query: 530 STPVGYKCSFYTLP 571
+TP G KCS T P
Sbjct: 277 ATPKGSKCSMITTP 290
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,209
Number of Sequences: 438
Number of extensions: 3491
Number of successful extensions: 18
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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