Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00636
         (498 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    25   0.38 
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   2.0  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   2.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   2.7  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   4.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   4.7  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   4.7  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   8.1  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 25.0 bits (52), Expect = 0.38
 Identities = 9/28 (32%), Positives = 18/28 (64%)
 Frame = +1

Query: 205 SFLNVCVRALYHRVLYVIIVYFEIRNFE 288
           +FLN C+  +Y+  L + ++   IR+F+
Sbjct: 170 TFLNSCLMDVYYEFLLISLINILIRSFK 197


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
 Frame = -1

Query: 375 SVTFGRTRRFDVFAVCARAFRILYINII-IFEISNLKIYNNNI 250
           S  +  T  F  FA+C     ++ +NI+ +F    +   ++NI
Sbjct: 66  SYMYAFTHIFFFFAICCDFIALIVVNIVHVFRKRRVNYKDSNI 108


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -2

Query: 269 KYTIITYKTRWYNARTHTLRKLKRL 195
           K  ++TY+ RWY  +T T+ + + L
Sbjct: 283 KSLVLTYEMRWY-CQTATMEEKQEL 306


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.2 bits (45), Expect = 2.7
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +2

Query: 206 VFLTCVCVRCTTVFYMLLLYI 268
           +F+ CV V+   + ++ LLYI
Sbjct: 615 IFIICVIVQSEQIAWLHLLYI 635


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -3

Query: 196 CEFFFRSPLSRSRAH*CHDGNRID 125
           C+ FFR  ++++  + C  GN  +
Sbjct: 208 CKGFFRRSITKNAVYQCKYGNNCE 231


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 5/19 (26%), Positives = 13/19 (68%)
 Frame = +1

Query: 214 NVCVRALYHRVLYVIIVYF 270
           N  +  ++H +L+ +++YF
Sbjct: 41  NCTIVIIFHLILFAVLLYF 59


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = +2

Query: 203 LVFLTCVCVRCTTVFYMLLLYI 268
           ++F+ CV V+   + ++ L+YI
Sbjct: 258 VIFVICVLVQSEKIVWLHLVYI 279


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 20.6 bits (41), Expect = 8.1
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +2

Query: 188 KLTDVLVFLTCVCVRCTTVFYMLLLY 265
           K+T V+VF+  +C     VF +L +Y
Sbjct: 286 KMTLVIVFVFVLCWSPYIVFDLLQVY 311


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,302
Number of Sequences: 336
Number of extensions: 1290
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 11735024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)