Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00632
         (683 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    26   0.25 
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    26   0.25 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    24   1.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   2.3  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   7.1  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 26.2 bits (55), Expect = 0.25
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 132 ILGDSGVGKTSLMNQFVNKKFSN 200
           ILG SG GKT+L+N       SN
Sbjct: 109 ILGSSGAGKTTLLNTLTFHTSSN 131


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 26.2 bits (55), Expect = 0.25
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +3

Query: 132 ILGDSGVGKTSLMNQFVNKKFSN 200
           ILG SG GKT+L+N       SN
Sbjct: 109 ILGSSGAGKTTLLNTLTFHTSSN 131


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = +3

Query: 162 SLMNQFVNKKFSNQYKATIGADFLTKEVIVDI 257
           +L+N  + K + N+Y+  I     ++E IVDI
Sbjct: 484 ALINSILRKLYKNKYRKLIVDGKKSEEQIVDI 515


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -1

Query: 377 CWGQLRQKLIRSNPPHDRKLLQVIGTV 297
           CW    +K   S+ P+  KL+QV+ T+
Sbjct: 761 CWQSNCKKGASSDKPNFTKLIQVVPTM 787


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 7.1
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -2

Query: 433 TW*CLYQEFVSPTLQGLKRV 374
           TW CLY+  V  TL  + +V
Sbjct: 160 TWRCLYRWIVLYTLSKMSQV 179


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,178
Number of Sequences: 336
Number of extensions: 3773
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17906060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)