Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00632
(683 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 135 6e-33
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 115 6e-27
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 70 3e-13
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 68 1e-12
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 64 1e-11
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 64 2e-11
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 63 4e-11
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 62 7e-11
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 61 2e-10
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 49 5e-07
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 48 2e-06
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 46 5e-06
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 45 1e-05
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 43 4e-05
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 42 8e-05
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 41 2e-04
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 40 4e-04
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 39 8e-04
SPBC16A3.01 |spn3|SPBC543.01c|septin Spn3|Schizosaccharomyces po... 31 0.16
SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr 1||... 31 0.20
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar... 31 0.20
SPAC222.05c |mss1||COX RNA-associated protein|Schizosaccharomyce... 30 0.27
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 28 1.1
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 28 1.1
SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces pombe... 28 1.1
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 28 1.1
SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomy... 28 1.4
SPBC26H8.08c |grn1||GTPase Grn1 |Schizosaccharomyces pombe|chr 2... 27 1.9
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 27 2.5
SPAC29B12.13 |||carbon-sulfur lyase |Schizosaccharomyces pombe|c... 27 3.3
SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces ... 25 7.7
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 135 bits (326), Expect = 6e-33
Identities = 56/84 (66%), Positives = 73/84 (86%)
Frame = +2
Query: 257 RIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRD 436
++VT+Q+WDTAGQERFQSLGVAFYRGADCCVLV+DV +F++L+SWRDEFLIQASP +
Sbjct: 55 KVVTLQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSN 114
Query: 437 PDNFPFVILGNKVDLDNRAVSVKR 508
P+ FPF++LGNKVD++ + V +
Sbjct: 115 PETFPFILLGNKVDVEEQKRMVSK 138
Score = 91.1 bits (216), Expect = 1e-19
Identities = 42/53 (79%), Positives = 49/53 (92%)
Frame = +3
Query: 96 MSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
M+ +KK LLKVIILG+SGVGKTS+MNQ+VN+KFS YKATIGADFLTKEV+VD
Sbjct: 1 MAGKKKHLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVD 53
Score = 52.8 bits (121), Expect = 4e-08
Identities = 22/45 (48%), Positives = 34/45 (75%)
Frame = +1
Query: 517 WCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQETEAELYNEF 651
+CQ++ +IPYFETSAKEA+NV+ AF+T+A+ AL ++ +F
Sbjct: 144 FCQARGEIPYFETSAKEAINVQEAFETVAKLALENMDSDDIAADF 188
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 115 bits (277), Expect = 6e-27
Identities = 53/100 (53%), Positives = 76/100 (76%), Gaps = 2/100 (2%)
Frame = +2
Query: 257 RIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRD 436
++VT+Q+WDTAGQERFQSLG+AFYRGADCCV+V++V +F S+E+WR EFL Q S +D
Sbjct: 55 KLVTLQLWDTAGQERFQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTS-QD 113
Query: 437 PDNFPFVILGNKVDLD--NRAVSVKRVNNGARARTTSRIL 550
FPF+I+GN++D D RAVS+ R + +++ S ++
Sbjct: 114 ECAFPFIIVGNQIDKDASKRAVSLHRALDYCKSKHGSNMI 153
Score = 91.9 bits (218), Expect = 8e-20
Identities = 41/53 (77%), Positives = 50/53 (94%)
Frame = +3
Query: 96 MSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
MS++K++ LKV+ILGDSGVGKT LMNQFVN+KFS +YKATIGADFLTK+V+VD
Sbjct: 1 MSAQKRVFLKVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVD 53
Score = 34.7 bits (76), Expect = 0.013
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 3/48 (6%)
Frame = +1
Query: 517 WCQSKN--DIPYFETSAKEAVNVELAFQTIARNALAQETEA-ELYNEF 651
+C+SK+ ++ +FE SAKE NV F+T++R AL E+ + N+F
Sbjct: 143 YCKSKHGSNMIHFEASAKENTNVTDLFETVSRLALENESSRDDFVNDF 190
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 70.1 bits (164), Expect = 3e-13
Identities = 34/102 (33%), Positives = 57/102 (55%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
V ++IWDTAGQER++SL +YR A+C ++V+D+T + + +SW E QA P+
Sbjct: 64 VKLEIWDTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQA----PE 119
Query: 443 NFPFVILGNKVDLDNRAVSVKRVNNGARARTTSRILRQVPKK 568
+ GNK+DL +V++ + A A + + + K
Sbjct: 120 GIVIALAGNKLDLAQERRAVEKADAEAYAAEANLLFFETSAK 161
Score = 48.0 bits (109), Expect = 1e-06
Identities = 21/44 (47%), Positives = 34/44 (77%)
Frame = +3
Query: 123 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
K+++LGDS VGK+SL+ +FV +F + ++TIGA FLT+ + +D
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPID 59
Score = 25.8 bits (54), Expect = 5.8
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = +1
Query: 544 YFETSAKEAVNVELAFQTIAR 606
+FETSAK A NV F IA+
Sbjct: 155 FFETSAKTAENVNELFTAIAK 175
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 68.1 bits (159), Expect = 1e-12
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
+ +QIWDTAGQE+F+S+ +YRGA VLV+DVT ++F+ L SW + A P
Sbjct: 62 IKLQIWDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMA----PS 117
Query: 443 NFPFVILGNKVDLDN-RAVSVK 505
V+ G+K DL N R VS +
Sbjct: 118 TICVVLAGSKSDLQNQRQVSTE 139
Score = 41.9 bits (94), Expect = 8e-05
Identities = 16/45 (35%), Positives = 30/45 (66%)
Frame = +3
Query: 117 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIV 251
L+K+++ G SG GK+ L+ +FV ++ +Q T+G DF ++ + V
Sbjct: 9 LVKIVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISV 53
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 64.5 bits (150), Expect = 1e-11
Identities = 32/82 (39%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Frame = +2
Query: 257 RIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRD 436
R V +Q+WDTAGQERF+SL ++ R + ++V+D+T N+F + E W ++ +
Sbjct: 58 RTVRLQLWDTAGQERFRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAERG--- 114
Query: 437 PDNFPFVILGNKVDL-DNRAVS 499
D+ V++GNK DL D R V+
Sbjct: 115 -DDVIIVLVGNKTDLADKRQVT 135
Score = 52.8 bits (121), Expect = 4e-08
Identities = 22/49 (44%), Positives = 36/49 (73%)
Frame = +3
Query: 123 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESLR 269
K++ LG+ VGKTSL+ +F+ +F N Y+ATIG DFL+K + ++ ++R
Sbjct: 13 KLVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVR 61
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 64.1 bits (149), Expect = 2e-11
Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
+ +QIWDTAGQERF+++ A+YRGA +L++DVT +F ++ +W AS +
Sbjct: 58 IKLQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHAS----E 113
Query: 443 NFPFVILGNKVDL-DNRAVSVKR 508
N +++GNK D D R VS ++
Sbjct: 114 NVYKILIGNKCDCEDQRQVSFEQ 136
Score = 43.6 bits (98), Expect = 3e-05
Identities = 18/46 (39%), Positives = 31/46 (67%)
Frame = +3
Query: 117 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
L+K++++GDSGVGK+ L+ +F F+ + TIG DF + + +D
Sbjct: 9 LIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELD 54
Score = 33.5 bits (73), Expect = 0.029
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +1
Query: 538 IPYFETSAKEAVNVELAFQTIARNALAQETEAELYNEFPTKS 663
+ + E SAK VNV+ AF T+AR Q+ +AE NEF ++
Sbjct: 146 VKFLEASAKTNVNVDEAFFTLAREIKKQKIDAE--NEFSNQA 185
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 62.9 bits (146), Expect = 4e-11
Identities = 35/96 (36%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
+ QIWDTAGQER++++ A+YRGA ++V+D+T ++F ++ W E A
Sbjct: 59 IKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHAD----S 114
Query: 443 NFPFVILGNKVDLDN-RAVSVKRVNNGARARTTSRI 547
N +++GNK DL + RAVS + A S I
Sbjct: 115 NIVIMLVGNKTDLLHLRAVSTEEAQAFAAENNLSFI 150
Score = 53.2 bits (122), Expect = 3e-08
Identities = 19/53 (35%), Positives = 39/53 (73%)
Frame = +3
Query: 117 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESLRCK 275
L K +++GDSGVGK++L+ +F +F+ + K+TIG +F T+ +++D + ++ +
Sbjct: 10 LFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQ 62
Score = 31.9 bits (69), Expect = 0.089
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +1
Query: 526 SKNDIPYFETSAKEAVNVELAFQTI 600
++N++ + ETSA +A NVE AFQT+
Sbjct: 143 AENNLSFIETSAMDASNVEEAFQTV 167
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 62.1 bits (144), Expect = 7e-11
Identities = 29/83 (34%), Positives = 46/83 (55%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
+ +WDTAGQE+ L +Y C +++FDVT+ T+K++ W + + R +
Sbjct: 58 ICFNVWDTAGQEKLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDLV-----RVCE 112
Query: 443 NFPFVILGNKVDLDNRAVSVKRV 511
N P V+ GNKVD+ R V K +
Sbjct: 113 NIPIVLCGNKVDVKERKVKAKAI 135
Score = 35.5 bits (78), Expect = 0.007
Identities = 12/35 (34%), Positives = 24/35 (68%)
Frame = +3
Query: 123 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGAD 227
K++++GD G GKT+ + + + +F +Y AT+G +
Sbjct: 11 KLVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVE 45
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 60.9 bits (141), Expect = 2e-10
Identities = 29/80 (36%), Positives = 51/80 (63%)
Frame = +2
Query: 257 RIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRD 436
+ V +QIWDTAGQERF+++ ++YRGA ++V+DVT ++F +++ W E A
Sbjct: 55 KTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYA---- 110
Query: 437 PDNFPFVILGNKVDLDNRAV 496
+ +++GNK D+ ++ V
Sbjct: 111 VEGVNRLLVGNKSDMVDKKV 130
Score = 44.0 bits (99), Expect = 2e-05
Identities = 18/45 (40%), Positives = 30/45 (66%)
Frame = +3
Query: 96 MSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADF 230
M+ L K++++GDSGVGK+ L+ +F + ++ Y +TIG DF
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDF 45
Score = 33.9 bits (74), Expect = 0.022
Identities = 14/24 (58%), Positives = 20/24 (83%)
Frame = +1
Query: 535 DIPYFETSAKEAVNVELAFQTIAR 606
+IP+ ETSAK++ NVE AF T++R
Sbjct: 144 NIPFLETSAKDSTNVEQAFLTMSR 167
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 49.2 bits (112), Expect = 5e-07
Identities = 27/103 (26%), Positives = 54/103 (52%)
Frame = +2
Query: 269 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNF 448
+ + DTAGQE + ++ + R + +LV+++T+ ++F + ++ + L +D D F
Sbjct: 58 LDVLDTAGQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQIL---RVKDKDTF 114
Query: 449 PFVILGNKVDLDNRAVSVKRVNNGARARTTSRILRQVPKKLSM 577
P V++ NK DL+ V V R A++ + + KL +
Sbjct: 115 PVVLVANKCDLEAERV-VSRAEGEQLAKSMHCLYVETSAKLRL 156
Score = 35.5 bits (78), Expect = 0.007
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +3
Query: 123 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIE 260
K++++GD GVGK++L Q + F ++Y TI D K+ +D E
Sbjct: 10 KLVVVGDGGVGKSALTIQLIQSHFVDEYDPTI-EDSYRKKCEIDGE 54
Score = 26.2 bits (55), Expect = 4.4
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +1
Query: 544 YFETSAKEAVNVELAFQTIAR 606
Y ETSAK +NVE AF ++ R
Sbjct: 147 YVETSAKLRLNVEEAFYSLVR 167
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 47.6 bits (108), Expect = 2e-06
Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 1/106 (0%)
Frame = +2
Query: 257 RIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSL-ESWRDEFLIQASPR 433
R + + +WDTAGQE + L Y + ++ F V AP + ++ E W E L S
Sbjct: 52 RHIELALWDTAGQEDYDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEVLHFCS-- 109
Query: 434 DPDNFPFVILGNKVDLDNRAVSVKRVNNGARARTTSRILRQVPKKL 571
N P +++G KVDL N +++ ++ ++ T + V +K+
Sbjct: 110 ---NLPILLVGCKVDLRNDPKTIEELSKTSQKPITFEEGQVVAQKI 152
Score = 28.7 bits (61), Expect = 0.83
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 111 KLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
+L K++I+GD GKT L+ F F Y T+ +++ +V VD
Sbjct: 4 ELRRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVA-DVEVD 50
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 46.0 bits (104), Expect = 5e-06
Identities = 25/83 (30%), Positives = 48/83 (57%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
V + +WDTAGQE ++ L Y A ++ F + +P+ SLE+ +++ + + P
Sbjct: 56 VQLALWDTAGQEEYERLRPMSYAKAHIILVGFAIDSPD---SLENVSTKWIEEINTLCP- 111
Query: 443 NFPFVILGNKVDLDNRAVSVKRV 511
N PF+++G K DL + V+++ +
Sbjct: 112 NVPFILVGMKADLRSDPVAIEEM 134
Score = 31.9 bits (69), Expect = 0.089
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = +3
Query: 123 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLT 236
K++++GD GKTSL++ F F +Y T+ ++++
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVS 47
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 44.8 bits (101), Expect = 1e-05
Identities = 22/59 (37%), Positives = 34/59 (57%)
Frame = +3
Query: 90 CKMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESL 266
C S +K + K++ILGD GKTSL+N F F Y+ TI +++ ++ VD S+
Sbjct: 4 CFGSKKKPIYRKIVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYI-HDIFVDGNSI 61
Score = 31.5 bits (68), Expect = 0.12
Identities = 21/73 (28%), Positives = 35/73 (47%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
+ + +WDTAGQE + L Y ++ F V + + SLE+ ++L + S P
Sbjct: 61 IELSLWDTAGQEEYDQLRSLSYSDTHVIMICFAVDSRD---SLENVITKWLPEVSSNCP- 116
Query: 443 NFPFVILGNKVDL 481
V++ K DL
Sbjct: 117 GVKLVLVALKCDL 129
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 43.2 bits (97), Expect = 4e-05
Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Frame = +2
Query: 257 RIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSL-ESWRDEFLIQASPR 433
+++ + +WDTAGQE + L Y ++ +L F + P + ++ E W E + PR
Sbjct: 62 KVIELALWDTAGQEEYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPE-VQHFCPR 120
Query: 434 DPDNFPFVILGNKVDL--DNRAVSVKR 508
P V++G K DL D A V R
Sbjct: 121 T----PIVLVGLKADLRKDRNATEVLR 143
Score = 35.9 bits (79), Expect = 0.005
Identities = 15/48 (31%), Positives = 28/48 (58%)
Frame = +3
Query: 93 KMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLT 236
K S+ + K++++GD G GKT L+ F + F +Y T+ +++T
Sbjct: 6 KSGSKSETSKKLVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYIT 53
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 41.9 bits (94), Expect = 8e-05
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = +3
Query: 105 RKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIV 251
+ + +KV ++GDS +GKTSLM +V F + T+G +F+ K + +
Sbjct: 6 KNNVTIKVGMIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTISI 54
Score = 33.5 bits (73), Expect = 0.029
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESW 400
+T IWD GQ F ++ A + +FD++ +T S++ W
Sbjct: 59 ITFSIWDLGGQREFVNMLPMVCNDAVAILFMFDLSRKSTLNSIKEW 104
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 40.7 bits (91), Expect = 2e-04
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Frame = +2
Query: 272 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFP 451
+I DTAGQ+ + L G VLV+ +T+ ++F+ ++ RD+ L + + P
Sbjct: 57 EIIDTAGQDEYSILNSKHSIGIHGYVLVYSITSKSSFEMVKIVRDKIL---NHTGTEWVP 113
Query: 452 FVILGNKVDLD-NRAVSVK 505
V++GNK DL RAV+ +
Sbjct: 114 IVVVGNKSDLHMQRAVTAE 132
Score = 30.3 bits (65), Expect = 0.27
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 123 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADF 230
++ +LG VGK+SL Q+V F Y TI F
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTF 43
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 39.5 bits (88), Expect = 4e-04
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 1/106 (0%)
Frame = +2
Query: 257 RIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSL-ESWRDEFLIQASPR 433
R V + +WDTAGQE + L Y + ++ F V +P++ ++ E W E L S
Sbjct: 52 RHVELALWDTAGQEDYDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEVLHFCS-- 109
Query: 434 DPDNFPFVILGNKVDLDNRAVSVKRVNNGARARTTSRILRQVPKKL 571
+ P +++ K DL N ++ ++ + T+ + V +K+
Sbjct: 110 ---SLPILLVACKADLRNDPKIIEELSKTNQHPVTTEEGQAVAQKI 152
Score = 28.7 bits (61), Expect = 0.83
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +3
Query: 111 KLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
+L K++I+GD GKT L+ F F Y T+ +++ +V VD
Sbjct: 4 ELRRKLVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVA-DVEVD 50
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 38.7 bits (86), Expect = 8e-04
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Frame = +2
Query: 266 TMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSL-ESWRDEFLIQASPRDPD 442
T+ ++DTAGQE + L Y D ++ F VT+P +F+++ E W E + P
Sbjct: 52 TLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVTSPASFENVKEKWFPE-VHHHCP---- 106
Query: 443 NFPFVILGNKVDL-DNRAVSVK 505
P +I+G ++DL D+ +V K
Sbjct: 107 GVPCLIVGTQIDLRDDPSVQQK 128
Score = 34.7 bits (76), Expect = 0.013
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +3
Query: 120 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
+K +++GD VGKT L+ + KF + Y T+ ++ +I D
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSDYVPTVFDNYAVTVMIGD 48
>SPBC16A3.01 |spn3|SPBC543.01c|septin Spn3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 412
Score = 31.1 bits (67), Expect = 0.16
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +3
Query: 93 KMSSRKKLLLKVIILGDSGVGKTSLMNQFVNK 188
K SS+K + L ++++GD G+G+T+ +N K
Sbjct: 44 KKSSKKGIPLNLMVVGDVGLGRTAFINTLCEK 75
>SPAC4F10.11 |spn1||septin Spn1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 469
Score = 30.7 bits (66), Expect = 0.20
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = +3
Query: 105 RKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADF 230
R+ V++LG+SG GK++L+N +N+ + ++ DF
Sbjct: 91 RQGFNFNVLVLGESGSGKSTLVNTLLNRDVYPPTQKSLTGDF 132
>SPBC1539.08 |||ADP-ribosylation factor, Arf
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 184
Score = 30.7 bits (66), Expect = 0.20
Identities = 18/76 (23%), Positives = 33/76 (43%)
Frame = +2
Query: 254 HRIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPR 433
++ + +WD GQ++ + L ++ G + V D N + R E S R
Sbjct: 62 YKNIKFNVWDVGGQDKIRPLWRHYFTGTKGLIFVVDSADSN---RISEARQELHRIISDR 118
Query: 434 DPDNFPFVILGNKVDL 481
+ + ++L NK DL
Sbjct: 119 EMRDCLLLVLANKQDL 134
>SPAC222.05c |mss1||COX RNA-associated protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 496
Score = 30.3 bits (65), Expect = 0.27
Identities = 22/56 (39%), Positives = 28/56 (50%)
Frame = +3
Query: 90 CKMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDI 257
CK RK + V ILG S GK+SL+N N++ S G EV+VDI
Sbjct: 232 CKEVLRKGI--NVAILGPSNAGKSSLINLLANRRIS-IVSPQSGTTRDAIEVLVDI 284
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 28.3 bits (60), Expect = 1.1
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = +3
Query: 93 KMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGAD 227
K+ SR + +++ G+SG+GKT+ F N FS K+ +G +
Sbjct: 20 KIVSRNGVAFTLMLCGESGLGKTT----FCNTLFSTTIKSHMGPE 60
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 28.3 bits (60), Expect = 1.1
Identities = 10/23 (43%), Positives = 18/23 (78%)
Frame = +3
Query: 120 LKVIILGDSGVGKTSLMNQFVNK 188
++V+I GD GVGK+SL++ + +
Sbjct: 4 VRVVICGDQGVGKSSLISALIQE 26
>SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 28.3 bits (60), Expect = 1.1
Identities = 12/37 (32%), Positives = 20/37 (54%)
Frame = +2
Query: 266 TMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPN 376
T +IWD +++ +L V + G D VL ++ PN
Sbjct: 315 TFRIWDVRNKQKTSALTVNAHPGVDVNVLSWNTRVPN 351
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 28.3 bits (60), Expect = 1.1
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = +3
Query: 105 RKKLLLKVIILGDSGVGKTSLMNQFVNKKFSN 200
R + + +I++G+S +GKT+ +N F+ +N
Sbjct: 114 RNGIDINLIVVGESSLGKTTFVNSFLQSNDTN 145
>SPBC4F6.18c |arf1||ADP-ribosylation factor Arf1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 180
Score = 27.9 bits (59), Expect = 1.4
Identities = 15/78 (19%), Positives = 34/78 (43%)
Frame = +2
Query: 254 HRIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPR 433
+R ++ +WD GQ++ + L +++ + V D N + + +E +
Sbjct: 58 YRNISFTVWDVGGQDKIRPLWRHYFQNTQGIIFVVD---SNDRERISEAHEELQRMLNED 114
Query: 434 DPDNFPFVILGNKVDLDN 487
+ + ++ NK DL N
Sbjct: 115 ELRDALLLVFANKQDLPN 132
>SPBC26H8.08c |grn1||GTPase Grn1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 470
Score = 27.5 bits (58), Expect = 1.9
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Frame = +3
Query: 81 KLLCKMSSRKKLL--LKVIILGDSGVGKTSLMNQFVNK 188
K L S++KKL L V ++G VGK+S++N VN+
Sbjct: 255 KSLKSYSAKKKLKSSLTVGVIGYPNVGKSSVINALVNR 292
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 27.1 bits (57), Expect = 2.5
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +3
Query: 87 LCKMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEV 245
+ + K+ ++V++LG GKT+++ +N+ N+ T G T EV
Sbjct: 6 ILRQQKLKEREVRVLLLGLDNAGKTTILKCLLNEDV-NEVSPTFGFQIRTLEV 57
>SPAC29B12.13 |||carbon-sulfur lyase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 137
Score = 26.6 bits (56), Expect = 3.3
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +1
Query: 487 SCRFCQTCQQWCQS 528
SC C+TC+ WC S
Sbjct: 25 SCCHCETCRIWCSS 38
>SPBC337.13c |gtr1||Gtr1/RagA G protein Gtr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 308
Score = 25.4 bits (53), Expect = 7.7
Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 7/64 (10%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVA-----FYRGADCCVLVFDVTAPNTFKSLESWRD--EFLIQ 421
+ + +WD GQE F ++ +R + VFDV + + L ++R+ E +
Sbjct: 51 LVLNLWDCGGQEAFMENYLSAQRDHIFRNVQVLIYVFDVESREFERDLVTFRNCLEATVA 110
Query: 422 ASPR 433
SP+
Sbjct: 111 NSPQ 114
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,949,591
Number of Sequences: 5004
Number of extensions: 63664
Number of successful extensions: 255
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 251
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 315915086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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