Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00632
(683 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 159 2e-39
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 109 2e-24
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 74 1e-13
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 70 2e-12
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 68 8e-12
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 68 8e-12
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 4e-11
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 6e-11
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 64 8e-11
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 8e-11
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 64 1e-10
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 64 1e-10
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 63 2e-10
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 63 2e-10
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 63 2e-10
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 2e-10
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 63 2e-10
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 62 4e-10
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 62 5e-10
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 62 5e-10
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 60 2e-09
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 59 3e-09
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 5e-09
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 56 4e-08
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 4e-08
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 55 6e-08
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 53 2e-07
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 53 2e-07
SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09) 51 1e-06
SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22) 49 3e-06
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 48 9e-06
SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 9e-06
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 47 1e-05
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 47 1e-05
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 3e-05
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 5e-05
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 45 5e-05
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 44 1e-04
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 43 3e-04
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 3e-04
SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 42 4e-04
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 42 5e-04
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 42 6e-04
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 41 8e-04
SB_43575| Best HMM Match : Sina (HMM E-Value=0) 41 0.001
SB_31439| Best HMM Match : Ras (HMM E-Value=4.7) 40 0.002
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 39 0.004
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 39 0.004
SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10) 39 0.004
SB_45581| Best HMM Match : Ras (HMM E-Value=0.069) 38 0.008
SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) 38 0.010
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 37 0.017
SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8) 37 0.017
SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.017
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 37 0.017
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 36 0.031
SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96) 36 0.031
SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.031
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 36 0.040
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 36 0.040
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 36 0.040
SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11) 36 0.040
SB_17523| Best HMM Match : MMR_HSR1 (HMM E-Value=4.2) 35 0.053
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 35 0.053
SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12) 35 0.071
SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.071
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 33 0.16
SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13) 33 0.16
SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 32 0.38
SB_12307| Best HMM Match : Death (HMM E-Value=0.00097) 32 0.38
SB_35075| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.50
SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05) 31 0.66
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.66
SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17) 31 0.87
SB_52855| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08) 31 1.1
SB_53505| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07) 31 1.1
SB_37096| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_37276| Best HMM Match : Ras (HMM E-Value=0.00045) 30 2.0
SB_20359| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_7052| Best HMM Match : LRR_1 (HMM E-Value=2e-12) 29 2.7
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.5
SB_35974| Best HMM Match : PUF (HMM E-Value=0.00065) 29 3.5
SB_58724| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_45651| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19) 29 4.6
SB_54819| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_37124| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.6
SB_45256| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_33756| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0035) 28 6.1
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_16952| Best HMM Match : AAA_5 (HMM E-Value=0.47) 28 6.1
SB_7780| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_44764| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_32582| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_26157| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20) 28 8.1
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 159 bits (386), Expect = 2e-39
Identities = 69/78 (88%), Positives = 76/78 (97%)
Frame = +2
Query: 275 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPF 454
IWDTAGQERFQSLGVAFYRGADCCVLVFDVT PN+FK+L+SWRDEFLIQASPRDP+NFPF
Sbjct: 1 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTQPNSFKTLDSWRDEFLIQASPRDPENFPF 60
Query: 455 VILGNKVDLDNRAVSVKR 508
V+LGNK+DL+NRAVS KR
Sbjct: 61 VVLGNKIDLENRAVSAKR 78
Score = 93.9 bits (223), Expect = 1e-19
Identities = 44/70 (62%), Positives = 51/70 (72%)
Frame = +1
Query: 445 FPLRNIGKQSRLG*SCRFCQTCQQWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQE 624
FP +G + L + Q WC SKNDIPYFETSAKEA+NVE AFQTIA+NALAQE
Sbjct: 58 FPFVVLGNKIDLENRAVSAKRAQAWCHSKNDIPYFETSAKEAINVEQAFQTIAKNALAQE 117
Query: 625 TEAELYNEFP 654
T+ ELYN+FP
Sbjct: 118 TDVELYNDFP 127
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 109 bits (262), Expect = 2e-24
Identities = 48/87 (55%), Positives = 63/87 (72%)
Frame = +2
Query: 266 TMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDN 445
T+QIWDTAGQERF+SL FYRG+D C+LV+ V +F +L W+ EFL A RD DN
Sbjct: 261 TLQIWDTAGQERFKSLRTPFYRGSDLCLLVYAVDDAKSFTNLSMWKKEFLYYADVRDQDN 320
Query: 446 FPFVILGNKVDLDNRAVSVKRVNNGAR 526
FPF++LGNKVD++ RAVS + ++ R
Sbjct: 321 FPFILLGNKVDVEGRAVSQEEADSWCR 347
Score = 48.0 bits (109), Expect = 7e-06
Identities = 24/41 (58%), Positives = 29/41 (70%)
Frame = +3
Query: 141 DSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIES 263
D GVGK+SLMN+FV KF Q TIG +FL K+V +D ES
Sbjct: 219 DGGVGKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGES 259
Score = 38.7 bits (86), Expect = 0.004
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 502 QTCQQWCQSKNDIPYFETSAKEAVNVELAF 591
+ WC+ +PYFETSAK++ NV AF
Sbjct: 340 EEADSWCRQNGGVPYFETSAKDSTNVNDAF 369
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 73.7 bits (173), Expect = 1e-13
Identities = 38/86 (44%), Positives = 54/86 (62%)
Frame = +2
Query: 227 FSHKRSNR*HRIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRD 406
F K N + V +QIWDTAGQERF+S+ ++YRGA +LV+D+++ TF SL +W
Sbjct: 132 FGSKIVNVGGKSVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDISSRETFNSLTNWLT 191
Query: 407 EFLIQASPRDPDNFPFVILGNKVDLD 484
+ ASP N +++GNK DLD
Sbjct: 192 DARTLASP----NIVIILVGNKKDLD 213
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 70.1 bits (164), Expect = 2e-12
Identities = 33/76 (43%), Positives = 46/76 (60%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
V +IWDTAGQER+ SL +YRGA ++V+D+T +TF ++W E QASP
Sbjct: 70 VKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFARAKTWVKELQRQASP---- 125
Query: 443 NFPFVILGNKVDLDNR 490
N + GNK DL ++
Sbjct: 126 NIVIALSGNKADLASK 141
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/44 (47%), Positives = 33/44 (75%)
Frame = +3
Query: 123 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
K+++LG+S VGK+SL+ +FV +F ++TIGA FLT+ V +D
Sbjct: 23 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLD 66
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 67.7 bits (158), Expect = 8e-12
Identities = 30/83 (36%), Positives = 48/83 (57%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
+ +WDTAGQE+F L +Y C +++FDVT+ T+K++ +W + R +
Sbjct: 81 IKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDL-----ERVCE 135
Query: 443 NFPFVILGNKVDLDNRAVSVKRV 511
N P V+ GNKVD+ +R V K +
Sbjct: 136 NIPIVLCGNKVDIKDRKVKAKAI 158
Score = 31.9 bits (69), Expect = 0.50
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +3
Query: 114 LLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGAD 227
+++ + +GD G GKT+ + + + +F +Y AT+G +
Sbjct: 31 IVVSFLQVGDGGTGKTTFVKRHLTGEFEKKYIATLGVE 68
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 67.7 bits (158), Expect = 8e-12
Identities = 35/82 (42%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Frame = +2
Query: 257 RIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRD 436
+I+ Q+WDTAGQER++++ A+YRGA VLV+D+T TF+ +E W E A P
Sbjct: 59 KIIKAQVWDTAGQERYRAITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVREHADP-- 116
Query: 437 PDNFPFVILGNKVDLDN-RAVS 499
+++GNK DL + RAV+
Sbjct: 117 --TIVVMLVGNKCDLKHLRAVA 136
Score = 52.0 bits (119), Expect = 4e-07
Identities = 20/46 (43%), Positives = 35/46 (76%)
Frame = +3
Query: 117 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
L K++++GDSGVGK+SL+++F +F + K+TIG +F T+ + V+
Sbjct: 12 LYKIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVE 57
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 65.3 bits (152), Expect = 4e-11
Identities = 34/87 (39%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
V +Q WDTAGQE+F+ + ++YR AD +LVFD+T TF S+ W L+
Sbjct: 60 VKLQCWDTAGQEKFRGITQSYYRNADAVILVFDITNRGTFASIPQW----LMNVQKYTNK 115
Query: 443 NFPFVILGNKVDLD--NRAVSVKRVNN 517
N V++GNK DL +R V+ + N
Sbjct: 116 NILKVLVGNKTDLKGASRKVNTRSAAN 142
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/55 (40%), Positives = 33/55 (60%)
Frame = +3
Query: 111 KLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESLRCK 275
K KV+++GD GVGKTSL+ +F F + +T+G D T+ ++DI R K
Sbjct: 9 KYSFKVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTR--VLDIHGDRVK 61
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 64.9 bits (151), Expect = 6e-11
Identities = 38/106 (35%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
V +QIWDTAGQERF+S+ ++Y AD ++ +D+T +F+SL W D+ +
Sbjct: 56 VKLQIWDTAGQERFRSITQSYYHNADGVIVTYDITNKKSFESLPQWLDD----TNRYTSK 111
Query: 443 NFPFVILGNKVDLD-NRAVSVKRVNNGARARTTSRILRQVPKKLSM 577
+ I+GNK DL NR V + +T RQ+ K+L+M
Sbjct: 112 DVLIAIVGNKSDLSTNRKVDFHHAKLLLKKKTLLHWRRQL-KRLTM 156
Score = 46.8 bits (106), Expect = 2e-05
Identities = 23/51 (45%), Positives = 30/51 (58%)
Frame = +3
Query: 117 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESLR 269
L K+I++GD+ VGKT L+ QF F TIG DF K V VD E ++
Sbjct: 7 LFKIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVK 57
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 64.5 bits (150), Expect = 8e-11
Identities = 36/78 (46%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +2
Query: 275 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPF 454
IWDTAGQERF+SL +YR A +LV+D+T +TF SL W E L + P+D
Sbjct: 13 IWDTAGQERFKSLAPLYYRDAAAAILVYDITIESTFHSLRPWIRE-LQRYGPQD---IVI 68
Query: 455 VILGNKVD-LDNRAVSVK 505
+ GNK D D R V V+
Sbjct: 69 AVAGNKCDKADQRDVQVQ 86
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 64.5 bits (150), Expect = 8e-11
Identities = 29/70 (41%), Positives = 46/70 (65%)
Frame = +2
Query: 269 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNF 448
+ IWDTAGQERF++L ++YRGA +LV+D + TF LE W +E + ++ +D
Sbjct: 59 LAIWDTAGQERFRTLTPSYYRGAQGVILVYDTNSRETFDKLEEWLNEVEMYSTKKD---I 115
Query: 449 PFVILGNKVD 478
+++GNK+D
Sbjct: 116 VKMLVGNKID 125
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/45 (46%), Positives = 31/45 (68%)
Frame = +3
Query: 120 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
LK++I+G+SGVGK+SL+ +F + F ATIG DF K + V+
Sbjct: 9 LKILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVE 53
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 64.1 bits (149), Expect = 1e-10
Identities = 30/80 (37%), Positives = 50/80 (62%)
Frame = +2
Query: 257 RIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRD 436
+ + +QIWDTAGQERF+++ ++YRGA ++V+DVT +F +++ W E A
Sbjct: 76 KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYAC--- 132
Query: 437 PDNFPFVILGNKVDLDNRAV 496
+N +++GNK DL + V
Sbjct: 133 -ENVNKLLVGNKCDLTTKKV 151
Score = 34.7 bits (76), Expect = 0.071
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 505 TCQQWCQSKNDIPYFETSAKEAVNVELAFQTIA 603
T +++ +S +P+ ETSAK A NVE AF T+A
Sbjct: 156 TAKEYAESLG-VPFLETSAKNATNVEQAFMTMA 187
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 96 MSSRKKLLLKVIILGDSGVGKTSLMNQF 179
M+ L K++++GDSGVGK+ L+ +F
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRF 28
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 64.1 bits (149), Expect = 1e-10
Identities = 33/88 (37%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
V +QIWDTAGQERF+++ ++YR + ++ +D+T +TFK++ W ++ A P+
Sbjct: 95 VKLQIWDTAGQERFRTITQSYYRSCNGVIIAYDITKCDTFKNVIRWGEDVQKYA----PE 150
Query: 443 NFPFVILGNKVDLD-NRAVSVKRVNNGA 523
N +++GNK DL+ R VS++ N A
Sbjct: 151 NAIKLLVGNKKDLEREREVSLEDAVNCA 178
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +1
Query: 550 ETSAKEAVNVELAFQTIAR 606
ETSAK+A N+E AF +AR
Sbjct: 188 ETSAKDATNIEAAFYRLAR 206
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 63.7 bits (148), Expect = 1e-10
Identities = 31/85 (36%), Positives = 54/85 (63%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
V +Q+WDTAG+E++++L +F+RGAD +LVFDV+ +F S+ RD +L +
Sbjct: 59 VKLQLWDTAGEEKYRALSRSFFRGADGALLVFDVSVKESFDSI---RDYWLHEFHKVSGS 115
Query: 443 NFPFVILGNKVDLDNRAVSVKRVNN 517
+ +++GNK D ++ VS + + N
Sbjct: 116 DTITILVGNKCDKKDKKVSEEDIQN 140
Score = 42.7 bits (96), Expect = 3e-04
Identities = 19/46 (41%), Positives = 30/46 (65%)
Frame = +3
Query: 117 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
+ KV++LGD VGK+SL+ +F + +F+ Q TIG DF + +D
Sbjct: 10 VFKVLVLGDCNVGKSSLIRRFHDDEFNAQLCTTIGVDFFIHDFDLD 55
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 63.3 bits (147), Expect = 2e-10
Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
+ + I DTAGQER+ S+ A++RG LVFD+T TF L W D L + +
Sbjct: 401 IKLTIGDTAGQERYFSILPAYFRGVQGVFLVFDITVEITFLQLHRWID--LARTTSGADS 458
Query: 443 NFPFVILGNKVDL-DNRAVSVKRVNNGA 523
N +++GNK D+ DNRAV+ R A
Sbjct: 459 NIQLILVGNKKDMEDNRAVTYSRAKEFA 486
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 123 KVIILGDSGVGKTSLMNQFVNKKFSNQY 206
K +I+G+SGVGK+ L+N+ N F ++
Sbjct: 352 KTLIIGNSGVGKSCLVNKLKNPHFDLKF 379
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 63.3 bits (147), Expect = 2e-10
Identities = 31/75 (41%), Positives = 44/75 (58%)
Frame = +2
Query: 257 RIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRD 436
+ + +QIWDTAGQERF++L A+YR A VL++DV TF L W +E S
Sbjct: 55 KTIKLQIWDTAGQERFRTLTTAYYRSAHGIVLIYDVNESETFLHLSQWLEE----VSEYA 110
Query: 437 PDNFPFVILGNKVDL 481
+ +++GNK DL
Sbjct: 111 CEGVNTILVGNKCDL 125
Score = 56.4 bits (130), Expect = 2e-08
Identities = 25/58 (43%), Positives = 41/58 (70%)
Frame = +3
Query: 96 MSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESLR 269
M+S L K++++GDSGVGK+SL+ +F + FSN Y +TIG DF + + VD ++++
Sbjct: 1 MNSEYDYLFKLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIK 58
Score = 32.7 bits (71), Expect = 0.28
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +1
Query: 529 KNDIPYFETSAKEAVNVELAFQTIARNALAQ 621
K DI + ETSAK++ NVE F+T+A A+
Sbjct: 142 KLDISFIETSAKDSTNVESVFRTMAAELKAK 172
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 62.9 bits (146), Expect = 2e-10
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
+ +QIWDTAGQERF ++ A+YRGA +LV+DVT +F ++ W L + +
Sbjct: 5 IKLQIWDTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFSNISKW----LKKIDDHANE 60
Query: 443 NFPFVILGNKVDL-DNRAVS 499
+ +++GNK D+ D R +S
Sbjct: 61 DVKRMLVGNKCDMYDKRVIS 80
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 62.9 bits (146), Expect = 2e-10
Identities = 28/78 (35%), Positives = 43/78 (55%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
+ +QIW AGQERF S+ +Y+GAD CV++FD+ T W+ + +
Sbjct: 68 IRLQIWLIAGQERFSSMTRVYYKGADACVVLFDLERQTTLDGAIKWKKDLDSKYKLHSRK 127
Query: 443 NFPFVILGNKVDLDNRAV 496
P +++GNK DL +R V
Sbjct: 128 PVPCILVGNKSDLPDRPV 145
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +3
Query: 123 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEV 245
KV+++GD GK S + ++VN + YK TIG DF K +
Sbjct: 20 KVLVVGDILTGKQSFVKRYVNNIWHPLYKPTIGVDFALKTI 60
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 62.9 bits (146), Expect = 2e-10
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 2/98 (2%)
Frame = +2
Query: 227 FSHKRSNR*HRIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRD 406
F K N + + +Q+WDTAGQERF+S+ ++R AD ++ +DVTA ++F +L+ W
Sbjct: 933 FQIKTMNVNGQCIAIQLWDTAGQERFRSITKQYFRKADGILIFYDVTAESSFTNLKKW-- 990
Query: 407 EFLIQASPRDPDNFPFVILGNKVDL--DNRAVSVKRVN 514
++ + ++LGNK DL D + VK ++
Sbjct: 991 --MVSVEEGAEEGVAKMVLGNKTDLAEDEESRVVKTID 1026
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/46 (41%), Positives = 32/46 (69%)
Frame = +3
Query: 117 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
+ KV+ +GDSGVGK+S +++F + ++ + ATIG DF K + V+
Sbjct: 896 VFKVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVN 941
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 62.1 bits (144), Expect = 4e-10
Identities = 29/77 (37%), Positives = 48/77 (62%)
Frame = +2
Query: 269 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNF 448
+Q+WDTAGQERF+S+ +++R AD +L++DVT +F + W + I+ S P
Sbjct: 493 LQLWDTAGQERFRSIAKSYFRKADGVLLLYDVTCETSFLDVRDWVE--AIEESCSKP--V 548
Query: 449 PFVILGNKVDLDNRAVS 499
P ++ GNK+D+ A +
Sbjct: 549 PIMLCGNKIDIRQSAAA 565
Score = 41.1 bits (92), Expect = 8e-04
Identities = 15/46 (32%), Positives = 29/46 (63%)
Frame = +3
Query: 117 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
+ K+++ GD+ VGK+S + + +F + +T+G DF K ++VD
Sbjct: 442 MFKIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKTLVVD 487
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 61.7 bits (143), Expect = 5e-10
Identities = 31/69 (44%), Positives = 44/69 (63%)
Frame = +2
Query: 236 KRSNR*HRIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFL 415
+RS R RI +Q+WDTAGQERF+SL AF+R A +LVFD+T +F ++ +W +
Sbjct: 158 ERSTRGQRI-HLQLWDTAGQERFRSLTTAFFRDAMGFLLVFDLTHEQSFVNIRNWLSQLQ 216
Query: 416 IQASPRDPD 442
A +PD
Sbjct: 217 THAYCENPD 225
Score = 52.4 bits (120), Expect = 3e-07
Identities = 23/47 (48%), Positives = 33/47 (70%)
Frame = +3
Query: 108 KKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVI 248
K+ L+K + LGDSGVGKTSL+ Q+ + F+ ++ TIG DF K V+
Sbjct: 103 KEFLIKFLALGDSGVGKTSLLYQYTDSHFNPRFVPTIGIDFREKRVV 149
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 61.7 bits (143), Expect = 5e-10
Identities = 29/78 (37%), Positives = 50/78 (64%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
V +QIWDTAGQERF+++ +YRG ++V+DVT+ +TF +++ W E ++ D
Sbjct: 26 VKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSADTFVNVKRWLHEI-----DQNCD 80
Query: 443 NFPFVILGNKVDLDNRAV 496
+ +++GNK D ++ V
Sbjct: 81 DVIRILVGNKDDCPSKKV 98
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 60.1 bits (139), Expect = 2e-09
Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESW---RDEFLIQASPR 433
VT+ +WDTAG ERF+++ +YRGA C+L+F+V P + + L W DEF
Sbjct: 60 VTLSVWDTAGVERFRTVTKNYYRGAHACILMFNVDDPGSLQYLLHWIHDTDEFC------ 113
Query: 434 DPDNFPFVILGNKVDLDNRAVS 499
PD V++ NK+DLD + +
Sbjct: 114 -PDALK-VLVANKIDLDEQVTT 133
Score = 38.7 bits (86), Expect = 0.004
Identities = 19/43 (44%), Positives = 27/43 (62%)
Frame = +3
Query: 117 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEV 245
L KV++LG++GVGKTSL + F+ + TIG D +K V
Sbjct: 11 LFKVVLLGEAGVGKTSLFYRLKENHFTPGRRNTIGIDSCSKFV 53
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 59.3 bits (137), Expect = 3e-09
Identities = 25/78 (32%), Positives = 49/78 (62%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
+ +QIWDTAGQERF+S+ ++YR C++++D+T ++F ++ W E +
Sbjct: 63 IKLQIWDTAGQERFRSITYSYYRNTVGCLIIYDITNRDSFVNVMDWYKE---AKQCVEEA 119
Query: 443 NFPFVILGNKVDLDNRAV 496
F+++G+K+D +++ V
Sbjct: 120 EVVFMLVGHKIDKESKRV 137
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/36 (44%), Positives = 24/36 (66%)
Frame = +3
Query: 123 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADF 230
++I++GDS VGK+SL+ QF +F T+G DF
Sbjct: 15 RIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDF 50
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 58.4 bits (135), Expect = 5e-09
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Frame = +2
Query: 263 VTMQIWDTAGQERF-QSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDP 439
V +Q+WDTAGQERF +S+ +YR + V ++D+T +F++L +W E+ A D
Sbjct: 95 VKLQLWDTAGQERFRKSMVCHYYRNVNAVVFMYDITRKCSFEALTTWIVEYRHHAYSGD- 153
Query: 440 DNFPFVILGNKVDLD-NRAVS 499
P +++GNK DL R VS
Sbjct: 154 --VPKILIGNKCDLGLERTVS 172
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/49 (40%), Positives = 30/49 (61%)
Frame = +3
Query: 123 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESLR 269
K+II+GDS VGKT L + KF + + TIG DF K + ++ E ++
Sbjct: 48 KIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVK 96
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 55.6 bits (128), Expect = 4e-08
Identities = 32/104 (30%), Positives = 53/104 (50%)
Frame = +2
Query: 257 RIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRD 436
R+ + I DTAGQE F ++ + R + +LVF VT ++F+ + + ++ L +D
Sbjct: 57 RVAHLDILDTAGQEEFSAMREQYMRSGEGFLLVFSVTDRSSFEEINKFYNQIL---RVKD 113
Query: 437 PDNFPFVILGNKVDLDNRAVSVKRVNNGARARTTSRILRQVPKK 568
FP +I GNK DL+ +V AR I++ VP +
Sbjct: 114 RTEFPMIICGNKSDLEYER-TVSTAEGQELARQLREIIKLVPDR 156
Score = 36.7 bits (81), Expect = 0.017
Identities = 16/44 (36%), Positives = 27/44 (61%)
Frame = +3
Query: 123 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
K++++G GVGK++L QF+ F + Y TI D K+ ++D
Sbjct: 13 KLVVVGGGGVGKSALTIQFIQSHFVSDYDPTI-EDSYRKQCVID 55
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 55.6 bits (128), Expect = 4e-08
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
V +QIWDTAGQERF+ L ++ R ++ ++VFD+T +F+S+ W + +
Sbjct: 212 VRLQIWDTAGQERFRCLIHSYIRDSEAALIVFDITNYTSFESVGDW----VKMVRDERGE 267
Query: 443 NFPFVILGNKVD-LDNRAVS 499
+I+GNK+D D R VS
Sbjct: 268 KAVIIIVGNKMDESDRRKVS 287
Score = 54.0 bits (124), Expect = 1e-07
Identities = 22/44 (50%), Positives = 32/44 (72%)
Frame = +3
Query: 123 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
K++ LGD GVGK+SL +F+ F +Y+ TIG DF+TK V++D
Sbjct: 165 KIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLD 208
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 54.8 bits (126), Expect = 6e-08
Identities = 21/53 (39%), Positives = 41/53 (77%)
Frame = +3
Query: 117 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESLRCK 275
L KV+++GDSGVGK++L+++F +F+ + K+TIG +F T+ + VD ++++ +
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQ 63
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 53.2 bits (122), Expect = 2e-07
Identities = 23/56 (41%), Positives = 39/56 (69%)
Frame = +2
Query: 227 FSHKRSNR*HRIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLE 394
F K R + V +QIWDTAGQER++++ A+YRGA +L++D+T +F++++
Sbjct: 58 FKVKTVFRNDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFQAVQ 113
Score = 41.9 bits (94), Expect = 5e-04
Identities = 16/43 (37%), Positives = 30/43 (69%)
Frame = +3
Query: 117 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEV 245
+ K++I+G+S VGKTS + ++ + F++ + +T+G DF K V
Sbjct: 21 MFKLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV 63
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 52.8 bits (121), Expect = 2e-07
Identities = 25/69 (36%), Positives = 43/69 (62%)
Frame = +2
Query: 278 WDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFV 457
W+ AGQERF+++ ++YRGA ++V+D+T ++ +L W E AS + +
Sbjct: 374 WE-AGQERFRTITSSYYRGAHGVMIVYDITKRESYNNLHKWLMEVETYAS----EGVHMI 428
Query: 458 ILGNKVDLD 484
++GNK+DLD
Sbjct: 429 LVGNKIDLD 437
Score = 32.3 bits (70), Expect = 0.38
Identities = 15/32 (46%), Positives = 23/32 (71%)
Frame = +1
Query: 511 QQWCQSKNDIPYFETSAKEAVNVELAFQTIAR 606
Q+W + +D+P+ ETSAK A NV+ AF ++R
Sbjct: 448 QEWA-ALHDMPFVETSAKGAKNVKEAFLVLSR 478
>SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09)
Length = 181
Score = 50.8 bits (116), Expect = 1e-06
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Frame = +2
Query: 293 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNK 472
QER++++ A+YRGA VLV+D+ +F +L W +E AS D+ +++GNK
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHAS----DDLSIILIGNK 57
Query: 473 VDLDN-RAVSVKRVNN 517
DL + R + +R +N
Sbjct: 58 SDLKHLRMIENRRGSN 73
>SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22)
Length = 159
Score = 49.2 bits (112), Expect = 3e-06
Identities = 24/63 (38%), Positives = 38/63 (60%)
Frame = +2
Query: 293 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNK 472
QER++++ A+YRGA VLV+D+ +F +L W +E AS D+ +++GNK
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHAS----DDLSIILIGNK 57
Query: 473 VDL 481
DL
Sbjct: 58 SDL 60
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 47.6 bits (108), Expect = 9e-06
Identities = 25/75 (33%), Positives = 38/75 (50%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
VT+++WD GQ RF+S+ + RG +C V + D LE+ ++E
Sbjct: 65 VTIKVWDIGGQPRFRSMWERYCRGVNCIVYMVDAA---DHDKLEASKNELHNLLEKPQLA 121
Query: 443 NFPFVILGNKVDLDN 487
P ++LGNK DL N
Sbjct: 122 GIPILVLGNKKDLPN 136
>SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 47.6 bits (108), Expect = 9e-06
Identities = 30/112 (26%), Positives = 52/112 (46%)
Frame = +2
Query: 158 NISDESVCQQKIFQPVQGDNRCRFSHKRSNR*HRIVTMQIWDTAGQERFQSLGVAFYRGA 337
N + E ++++P G + F+ SN H + + DT+G E ++ L + +
Sbjct: 34 NSTSEHWQGSRLYKPTTGGHASYFT--ASNSCH----LYLLDTSGLEEYRELTKIYLKNL 87
Query: 338 DCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDLDNRA 493
DC V F + P++ SLE W ++FL D +LG K+D + A
Sbjct: 88 DCVVFTFALNDPHSLSSLEKWNNDFL-DVFLGDSSRVLKFVLGCKIDTQHEA 138
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/38 (50%), Positives = 31/38 (81%)
Frame = +3
Query: 105 RKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATI 218
R++ L KV+++GD GVGKTSL+ ++V++ FS Y+AT+
Sbjct: 667 RREYLFKVLVIGDLGVGKTSLIKRYVHQFFSVHYRATV 704
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/73 (28%), Positives = 37/73 (50%)
Frame = +2
Query: 308 SLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDLDN 487
S + +Y+ A +VFDVT +TF +++ W+++ + + P V+L NK D
Sbjct: 705 SFNIVYYKEAVGAFIVFDVTRASTFSAVQKWKNDLDNKLQLPSGEPIPAVLLANKCDQAK 764
Query: 488 RAVSVKRVNNGAR 526
+ VNN A+
Sbjct: 765 EGL----VNNSAQ 773
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +1
Query: 514 QWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQETE 630
++C K I +FETSAKE VNV A + + L E E
Sbjct: 776 EYCADKGFIGWFETSAKEDVNVNEAAKFLVSKILQNEKE 814
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 47.2 bits (107), Expect = 1e-05
Identities = 29/101 (28%), Positives = 54/101 (53%)
Frame = +2
Query: 275 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPF 454
+WDTAGQE + L Y D ++ FD+ + +F+++ES ++L + + P+ P
Sbjct: 57 LWDTAGQEDYDRLRPLSYPMTDVFLVCFDIGSRTSFENIES---KWLPELNHHMPET-PK 112
Query: 455 VILGNKVDLDNRAVSVKRVNNGARARTTSRILRQVPKKLSM 577
+++GNK DL + + N+ +R T + + K+L M
Sbjct: 113 ILVGNKRDLRSAQQNTSLSNHRSRDPITYEEGKALAKRLGM 153
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/45 (26%), Positives = 26/45 (57%)
Frame = +3
Query: 120 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
+K++++GD GVGK++ + F +Y T+ D + +++D
Sbjct: 6 VKLVVVGDGGVGKSAFLITATTNAFPGEYIPTV-FDNYSSNIMLD 49
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/85 (29%), Positives = 43/85 (50%)
Frame = +2
Query: 275 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPF 454
I DTAGQE + ++ + R + + VF V +F+ + +R++ +D + P
Sbjct: 281 ILDTAGQEEYSAMRDQYMRTGEGFLCVFAVNNSKSFEDINQYREQI---KRVKDAEEVPM 337
Query: 455 VILGNKVDLDNRAVSVKRVNNGARA 529
V++GNK DL R VS A++
Sbjct: 338 VLVGNKCDLPQRTVSTSDAQELAKS 362
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/53 (33%), Positives = 37/53 (69%)
Frame = +3
Query: 117 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESLRCK 275
L K++++GDSGVGK++L++++ +F KATIG + + V ++ +++R +
Sbjct: 18 LFKIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQ 70
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 45.2 bits (102), Expect = 5e-05
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSL-ESWRDEFLIQASPRDP 439
V + +WDTAGQE + L Y D ++ F + +P++ +++ E W E + P
Sbjct: 5977 VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPE-VKHFCP--- 6032
Query: 440 DNFPFVILGNKVDL 481
N P +++GNK DL
Sbjct: 6033 -NVPIILVGNKKDL 6045
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/44 (31%), Positives = 25/44 (56%)
Frame = +3
Query: 123 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
K++I+GD GKT L+ F +F Y T+ +++ ++ VD
Sbjct: 5931 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVA-DIEVD 5973
>SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +2
Query: 323 FYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQ-ASPRDPDNFPFVILGNKVDLDNRAV 496
FY+ +LV+DVT+ +F++L+ W DE SP D ++ FV+ NKVD R V
Sbjct: 10 FYKDTQGALLVYDVTSRESFEALDIWLDEIKKDIGSPSDFNSVVFVVCANKVDSRKRLV 68
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 45.2 bits (102), Expect = 5e-05
Identities = 20/43 (46%), Positives = 29/43 (67%)
Frame = +3
Query: 117 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEV 245
+ +V++LG GVGKTSL+ +F++ FS QY T+G D K V
Sbjct: 107 VFRVVVLGSGGVGKTSLVKRFISGTFSEQYTPTVG-DLYEKSV 148
Score = 33.1 bits (72), Expect = 0.22
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +2
Query: 269 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTF-KSLESWRDEFLIQASPRDPDN 445
++I DTAG F ++ + AD VLV+ V + ++LE R+ I+
Sbjct: 158 LEIMDTAGSYPFPAMKKLTIQNADAFVLVYSVDEKASLQEALELQREIVYIKGK-----T 212
Query: 446 FPFVILGNKVDL 481
P V++GNK DL
Sbjct: 213 VPMVLVGNKTDL 224
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = +3
Query: 123 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
KV++LG GVGK++L QFV +F +Y TI DF KE+ VD
Sbjct: 5 KVVVLGSGGVGKSALTVQFVTGQFVEKYDPTI-EDFYRKEIEVD 47
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/78 (33%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Frame = +2
Query: 269 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNF 448
++I DTAG E+F S+ + + +LV+ + TF L+ R + L + +N
Sbjct: 53 LEILDTAGTEQFASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQIL---RVKGSENV 109
Query: 449 PFVILGNKVDL-DNRAVS 499
P V++GNK D+ D R VS
Sbjct: 110 PIVLVGNKSDIYDEREVS 127
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/56 (42%), Positives = 31/56 (55%)
Frame = +3
Query: 105 RKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESLRC 272
RKK LK +I+GD GVGKTSL+ ++ F N Y T F T V V++ C
Sbjct: 14 RKKEQLKCVIVGDGGVGKTSLLVSYMMDGFPNSYVPTA---FDTYHVTVEVNKKLC 66
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Frame = +2
Query: 257 RIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLES-WRDEFLIQASPR 433
++ ++ DTAGQE F +L Y AD ++ F V +P +F ++ S W E + + P+
Sbjct: 64 KLCMIEFCDTAGQEDFDALRPLCYSSADVFIVCFSVVSPTSFANVASKWIPE-IREFQPK 122
Query: 434 DPDNFPFVILGNKVDL 481
P +++G DL
Sbjct: 123 ----APIILVGTHSDL 134
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/84 (28%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Frame = +2
Query: 266 TMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSL-ESWRDEFLIQASPRDPD 442
T+ ++DTAGQE + L Y D ++ F V +P++F+++ E W E + P+
Sbjct: 52 TLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPE-ITHHCPKT-- 108
Query: 443 NFPFVILGNKVDLDNRAVSVKRVN 514
PF+++G +VDL + ++++++
Sbjct: 109 --PFLLVGTQVDLRDDQGTIEKLS 130
Score = 34.3 bits (75), Expect = 0.093
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 120 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATI 218
+K +++GD VGKT L+ + KF ++Y T+
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV 36
>SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 42.3 bits (95), Expect = 4e-04
Identities = 18/41 (43%), Positives = 29/41 (70%)
Frame = +3
Query: 99 SSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIG 221
S+ ++L KV+I+GD+ VGKTS + ++V+ +YK TIG
Sbjct: 16 STMSEILFKVLIVGDATVGKTSFVQRYVHGNTRREYKPTIG 56
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 42.3 bits (95), Expect = 4e-04
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +2
Query: 278 WDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFV 457
+ TAG E+F S+ + + +LV+ + TF L+ R + L + +N P V
Sbjct: 40 YHTAGTEQFASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQIL---RVKGSENVPIV 96
Query: 458 ILGNKVDL-DNRAVSVKRVNNGARA 529
++GNK D+ D R VSV + A A
Sbjct: 97 LVGNKSDIYDEREVSVGEAKDLAEA 121
Score = 40.3 bits (90), Expect = 0.001
Identities = 27/72 (37%), Positives = 36/72 (50%)
Frame = +3
Query: 123 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESLRCKYGILLAKNG 302
KV++LG GVGK++L QFV +F +Y TI DF S+R Y KNG
Sbjct: 5 KVVVLGSGGVGKSALTVQFVTGQFVEKYDPTI-EDFYHTAGTEQFASMRDLY----IKNG 59
Query: 303 SNHLE*LSIVGR 338
L S++ R
Sbjct: 60 QGFLLVYSLINR 71
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 41.9 bits (94), Expect = 5e-04
Identities = 17/46 (36%), Positives = 32/46 (69%)
Frame = +3
Query: 93 KMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADF 230
K SS + ++KV+I+G+ GVGK++L +F+ K+F +Y T+ + +
Sbjct: 853 KASSHQGRIVKVVIIGEDGVGKSALTVRFLTKRFIGEYDDTLESTY 898
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 41.5 bits (93), Expect = 6e-04
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKS-LESWRDEFLIQASPRDP 439
+ + +WDT+G E + + Y D ++ FD++ P T S LE W +I+ P
Sbjct: 280 IELTLWDTSGHEDYDHVRPLSYNNVDIVLICFDISRPKTADSILEKW----IIEVCDLCP 335
Query: 440 DNFPFVILGNKVDLDNRAVSVKRV 511
N P +++G K DL + V ++
Sbjct: 336 -NKPVLLVGCKQDLRSEVNIVSKL 358
Score = 41.1 bits (92), Expect = 8e-04
Identities = 20/52 (38%), Positives = 36/52 (69%)
Frame = +3
Query: 111 KLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESL 266
++ + VI++GDS GKT+L+N +V +F+ +Y+AT+ + L+ V VD E +
Sbjct: 230 QIRIPVILVGDSECGKTALLNAYVRNQFNEKYEATV-FNSLSTAVEVDGERI 280
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 41.1 bits (92), Expect = 8e-04
Identities = 22/71 (30%), Positives = 40/71 (56%)
Frame = +2
Query: 269 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNF 448
+ +WDT G + L Y+G+D +L FD++ TF+ +ES ++L + + P +
Sbjct: 54 LDLWDTEGTTEYDRLRPLTYQGSDIILLCFDISNRQTFERIES---KWLPETTQVLPGSI 110
Query: 449 PFVILGNKVDL 481
V++GNK D+
Sbjct: 111 R-VLIGNKNDI 120
Score = 28.3 bits (60), Expect = 6.1
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +3
Query: 96 MSSRKKLLLKVIILGDSGVGKTSLM 170
M+S +KL KV++ GD+ VGKTS +
Sbjct: 1 MASERKL--KVVLTGDNNVGKTSFL 23
>SB_43575| Best HMM Match : Sina (HMM E-Value=0)
Length = 432
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/67 (37%), Positives = 39/67 (58%)
Frame = +2
Query: 281 DTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVI 460
DTAG+E++ L + RGA ++ +D+T ++ K L R L+QA+ +P N VI
Sbjct: 278 DTAGEEKYAGLSSFYCRGASAAIVAYDITKESSLKVLND-RHLHLLQAA--EP-NCLVVI 333
Query: 461 LGNKVDL 481
+G K DL
Sbjct: 334 VGCKKDL 340
>SB_31439| Best HMM Match : Ras (HMM E-Value=4.7)
Length = 55
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/51 (37%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +2
Query: 323 FYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQ-ASPRDPDNFPFVILGNK 472
FY+ +LV+DVT+ +F++L+ W DE SP D ++ FV+ NK
Sbjct: 5 FYKDTQGALLVYDVTSRESFEALDIWLDEIKKDIGSPSDFNSVVFVVCANK 55
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/32 (46%), Positives = 25/32 (78%)
Frame = +3
Query: 126 VIILGDSGVGKTSLMNQFVNKKFSNQYKATIG 221
+++LG +GVGKT+L+ +FV +F N+Y T+G
Sbjct: 327 MVVLGAAGVGKTALVVRFVTGRFLNEYDPTLG 358
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/75 (29%), Positives = 34/75 (45%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
+ ++WD G+E+ + L A+ R D + V D T+ LE RDE + +
Sbjct: 66 IRFKVWDIGGREQNRPLWKAYARQTDAVIYVVDSTSAG---KLEEARDELFNLLNSAQLN 122
Query: 443 NFPFVILGNKVDLDN 487
P +I NK D N
Sbjct: 123 GAPILIFANKQDCPN 137
>SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10)
Length = 166
Score = 38.7 bits (86), Expect = 0.004
Identities = 15/41 (36%), Positives = 27/41 (65%)
Frame = +3
Query: 96 MSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATI 218
M ++ L ++ + G +GVGKTS++ +F KFS +Y+ T+
Sbjct: 1 MKEKRNSLHEIAVFGGAGVGKTSIVKRFYCGKFSEEYEPTV 41
>SB_45581| Best HMM Match : Ras (HMM E-Value=0.069)
Length = 284
Score = 37.9 bits (84), Expect = 0.008
Identities = 14/34 (41%), Positives = 25/34 (73%)
Frame = +3
Query: 120 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIG 221
L+V++LG GVGK++L + + K+F +Y +T+G
Sbjct: 17 LRVVVLGQDGVGKSALTVRLLTKRFIGEYDSTLG 50
>SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)
Length = 270
Score = 37.5 bits (83), Expect = 0.010
Identities = 19/44 (43%), Positives = 26/44 (59%)
Frame = +3
Query: 123 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
K+ ILG GVGKTSL+ F KFS ++ T+ D+ V +D
Sbjct: 14 KISILGAGGVGKTSLLKTFFGHKFSEKHVPTVD-DYFIHSVNMD 56
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 36.7 bits (81), Expect = 0.017
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +3
Query: 123 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
++ +LGD GVGKT+L+ +F+ +F +Y TI D K + +D
Sbjct: 7 RIALLGDEGVGKTALLVRFLCHRFLGEYDPTI-EDKYRKSINID 49
Score = 29.9 bits (64), Expect = 2.0
Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Frame = +2
Query: 263 VTMQIWDTAGQ-ERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDP 439
VT++I DTA + + L F R D ++V+ +TF +L +RD + P
Sbjct: 53 VTLEILDTASRGQNSCKLRDQFVREGDGFIVVYSTADRSTFANLHRYRDMMKLSRDTNLP 112
Query: 440 DN 445
N
Sbjct: 113 SN 114
>SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8)
Length = 65
Score = 36.7 bits (81), Expect = 0.017
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = +3
Query: 96 MSSRKK--LLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGA 224
M RKK LLKV+++GDS VGKT L+ F+ ++ Q T G+
Sbjct: 3 MKPRKKQDYLLKVLLIGDSNVGKTKLLLTFLGQESIVQQMPTAGS 47
>SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 36.7 bits (81), Expect = 0.017
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 347 VLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL-DNRAVSVKR 508
+LV+D+T ++FK + W ASP N V+LGNK+D D R + +R
Sbjct: 6 LLVYDITTEDSFKHISQWLQNIEDNASP----NVCKVLLGNKLDAEDERVIDAQR 56
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 532 NDIPYFETSAKEAVNVELAFQTIARNALAQ 621
N++ ++E SA+ NV+ AF +AR Q
Sbjct: 64 NNLEFYEASARTGENVQQAFMAVARKIKEQ 93
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 36.7 bits (81), Expect = 0.017
Identities = 23/107 (21%), Positives = 51/107 (47%), Gaps = 1/107 (0%)
Frame = +2
Query: 257 RIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRD 436
++ +++ DTAGQE + S + D +++F + + +++ L+ R + + + +
Sbjct: 2631 KLYDIEVVDTAGQEEYTSFRDSSLATGDAFLVLFAINSASSWNELKDLRGKIIREHEESN 2690
Query: 437 PD-NFPFVILGNKVDLDNRAVSVKRVNNGARARTTSRILRQVPKKLS 574
P VI+GNK+ N S + + + + + R +PK S
Sbjct: 2691 TTCTIPMVIVGNKMTGLNVRESFQLMMQQIQKINPALLERTIPKNAS 2737
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 35.9 bits (79), Expect = 0.031
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +3
Query: 126 VIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIES 263
++ G S VGKTSL+ +F+ F++ Y TI DF K V + E+
Sbjct: 31 IVFFGASSVGKTSLILRFLGYAFNDDYSPTI-EDFFIKHVFFNNET 75
Score = 33.5 bits (73), Expect = 0.16
Identities = 22/71 (30%), Positives = 32/71 (45%)
Frame = +2
Query: 269 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNF 448
+QI DT+G F ++ D VLV+ P +F L +R E L R
Sbjct: 78 LQIIDTSGTYEFPAMRKVDIAKGDAFVLVYSQDHPESFTKLNRYRSEILEGGKNR----H 133
Query: 449 PFVILGNKVDL 481
P +++ NK DL
Sbjct: 134 PCIVVCNKNDL 144
>SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96)
Length = 244
Score = 35.9 bits (79), Expect = 0.031
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = +3
Query: 123 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATI 218
K+ ILG S VGKTSLM K F+N++ TI
Sbjct: 189 KMAILGGSAVGKTSLMRALFKKPFTNEHIPTI 220
>SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 35.9 bits (79), Expect = 0.031
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = +2
Query: 269 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFL 415
++ WD G ++ FY G + +LV D+T +F +L W E L
Sbjct: 62 LEFWDIGGSANHENSRSIFYNGINGLILVHDLTNRKSFTNLRKWLAEVL 110
Score = 31.1 bits (67), Expect = 0.87
Identities = 13/34 (38%), Positives = 24/34 (70%)
Frame = +3
Query: 120 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIG 221
+++ ++GDSGVGKTSL++ +++ + TIG
Sbjct: 7 VRIAVVGDSGVGKTSLVHLICHEESISSAAWTIG 40
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 35.5 bits (78), Expect = 0.040
Identities = 14/34 (41%), Positives = 25/34 (73%)
Frame = +3
Query: 117 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATI 218
L K++++GDSGVGKT ++ +F + F+ + +TI
Sbjct: 9 LFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTI 42
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/54 (31%), Positives = 30/54 (55%)
Frame = +2
Query: 335 ADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDLDNRAV 496
A+ +LV+D+T TF ++ W A+ ++ +ILGNK D+D+R +
Sbjct: 125 AEGIMLVYDITQEKTFDNISKWLRNIEEHAN----EDVEKMILGNKCDMDDRRI 174
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +1
Query: 529 KNDIPYFETSAKEAVNVELAFQTIARNALAQE 624
++ I + ETSAK +N+E AFQ +A++ L +E
Sbjct: 186 EHGIRFLETSAKTNINIEQAFQYLAQDILKKE 217
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 35.5 bits (78), Expect = 0.040
Identities = 22/75 (29%), Positives = 39/75 (52%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
VT+ IWD GQ++ + L +++G + L+F V + + + E+ + + S D
Sbjct: 64 VTLTIWDVGGQDKIRPLWRHYFQGTE--GLLFVVDSSDVLRMPEAKEELHGVLDSDEFRD 121
Query: 443 NFPFVILGNKVDLDN 487
P V++ NK DL N
Sbjct: 122 -VPVVVVANKQDLPN 135
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 35.5 bits (78), Expect = 0.040
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 323 FYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDLDN-RAV 496
+YRGA +LV+D+ T++++E W E A N +++GNK DL + RAV
Sbjct: 2 YYRGAVGALLVYDIAKHLTYENVERWLKELRDHAD----SNIVIMLVGNKSDLRHLRAV 56
>SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11)
Length = 220
Score = 35.5 bits (78), Expect = 0.040
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Frame = +2
Query: 257 RIVTMQIWDTAGQERF-----QSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQ 421
+ V + I DT G+ R +S YR V+VFDVT +F+ + +W D +
Sbjct: 15 KTVHLHIVDTPGESRSVFHLAESTVPLIYRALSGAVIVFDVTDRKSFERVPTWLD----K 70
Query: 422 ASPRDPDNFPFVILGNKVD 478
P V++GNK D
Sbjct: 71 VQEHCGHEIPVVLVGNKTD 89
>SB_17523| Best HMM Match : MMR_HSR1 (HMM E-Value=4.2)
Length = 87
Score = 35.1 bits (77), Expect = 0.053
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = +3
Query: 117 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIV 251
L KV+ G GVGKTSL + ++KF + + D KEV+V
Sbjct: 27 LYKVVFAGFRGVGKTSLFLRIRDEKFYGKESRDMTPDICVKEVVV 71
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 35.1 bits (77), Expect = 0.053
Identities = 18/73 (24%), Positives = 34/73 (46%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
+T +WD GQ++ + L +++GA+ + V D + R+E + +
Sbjct: 154 ITFSVWDIGGQDKIRRLWRHYFQGAEGIIFVVDSADKERIFEV---REELTRVLQHSELN 210
Query: 443 NFPFVILGNKVDL 481
P V++ NK DL
Sbjct: 211 GVPVVVVANKQDL 223
>SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12)
Length = 460
Score = 34.7 bits (76), Expect = 0.071
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +3
Query: 96 MSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATI 218
M S ++V++LG GVGK++L +F+ ++F +Y T+
Sbjct: 9 MHSNTTKPVRVVVLGKDGVGKSALTVRFLTRRFIGEYDQTL 49
>SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1306
Score = 34.7 bits (76), Expect = 0.071
Identities = 19/54 (35%), Positives = 31/54 (57%)
Frame = +3
Query: 87 LCKMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVI 248
L K SS L + +LG+ VGK+SL+ F + F +Y TI +F++K ++
Sbjct: 17 LGKRSSAYLKKLTIAVLGEGRVGKSSLIRGFCGEGFQEEYVPTI-EEFVSKHLL 69
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/78 (21%), Positives = 42/78 (53%)
Frame = +2
Query: 254 HRIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPR 433
++ ++ +WD GQ++ ++L +Y+G C ++F V + + ++ E+ R+E +
Sbjct: 37 YKNISFTVWDIGGQDKIRALWRVYYQG--CQGIIFVVDSADRERAEEA-RNELHKLLAEE 93
Query: 434 DPDNFPFVILGNKVDLDN 487
+ +++ NK D+ N
Sbjct: 94 ELQQVILLVIANKQDMAN 111
>SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13)
Length = 322
Score = 33.5 bits (73), Expect = 0.16
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = +3
Query: 114 LLLKVIILGDSGVGKTSLMNQFVN--KKFSNQYKATIGADFLTKEV 245
L KV++ GDS VGK++L+ F + + Y T+GA+ L K V
Sbjct: 4 LRAKVLVTGDSCVGKSALVQVFQSDGTHYPKNYTQTVGAEVLVKLV 49
>SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 33.1 bits (72), Expect = 0.22
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYR 331
+ + +WDTAGQE F ++ A+YR
Sbjct: 34 IRLMLWDTAGQEEFDAITKAYYR 56
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 32.3 bits (70), Expect = 0.38
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +3
Query: 123 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEV 245
K+ ++G VGK+SL QFV +F + Y TI F TK +
Sbjct: 8 KIAVMGFRSVGKSSLTIQFVEGQFVDSYDPTIENTF-TKNI 47
>SB_12307| Best HMM Match : Death (HMM E-Value=0.00097)
Length = 1366
Score = 32.3 bits (70), Expect = 0.38
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +3
Query: 123 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESLR 269
+++++G GKTSL + +F Q ++T G + VD+E +R
Sbjct: 363 RIMLIGQDRAGKTSLKKSLLGLRFDPQEESTEGIEVDPSRFEVDVEQVR 411
>SB_35075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1184
Score = 31.9 bits (69), Expect = 0.50
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +1
Query: 532 NDIPYFETSAKEAVNVELAFQTIAR 606
+++ + ETSAK +NV+LAF IAR
Sbjct: 150 HNVAFMETSAKTGLNVDLAFMAIAR 174
>SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05)
Length = 243
Score = 31.5 bits (68), Expect = 0.66
Identities = 17/91 (18%), Positives = 36/91 (39%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
V +Q WD A ERF + + R ++ + +P+ S W + + +
Sbjct: 108 VKLQFWDVAEHERFLKMTAVYCRNCSGALVFWGPKSPSRLSSALKWSE----KVKEANSG 163
Query: 443 NFPFVILGNKVDLDNRAVSVKRVNNGARART 535
+ P V++ + R ++ + G A +
Sbjct: 164 SVPMVLVVENIPPSKRGKPMEWIGKGKTAES 194
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 31.5 bits (68), Expect = 0.66
Identities = 11/31 (35%), Positives = 23/31 (74%)
Frame = +3
Query: 126 VIILGDSGVGKTSLMNQFVNKKFSNQYKATI 218
+++LG +GVGK++L+ +F +F ++Y T+
Sbjct: 130 LVLLGQAGVGKSALLVRFCTGRFIHEYDPTL 160
>SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17)
Length = 134
Score = 31.1 bits (67), Expect = 0.87
Identities = 13/56 (23%), Positives = 30/56 (53%)
Frame = +2
Query: 323 FYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDLDNR 490
+ R + ++++ +T ++F ++D+ R D+ P V++GNK DL+ +
Sbjct: 5 YMRNGEGFIIIYSITDRSSFNLAAQYKDQI---ERVRRTDDIPIVLVGNKDDLEGK 57
>SB_52855| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = +3
Query: 417 YRHHHVTLIISPS*YWETKSTWIIVP 494
Y H H T++ISPS Y +T +I P
Sbjct: 47 YHHRHTTIVISPSSYHHLHTTIVISP 72
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +3
Query: 417 YRHHHVTLIISPS*YWETKSTWIIVP--FLSNVSTMVPEQERH 539
Y H H+T++ISPS Y T I P + + ++P H
Sbjct: 103 YHHRHMTIVISPSSYHHRHITIAISPSSYRHTIIVILPSSYHH 145
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +3
Query: 417 YRHHHVTLIISPS*YWETKSTWIIVPFLSNVSTMV 521
Y H H+T++ISP Y T +I P + ++ ++
Sbjct: 143 YHHRHITIVISPPSYHHRYITIVISPISAFIAIII 177
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 417 YRHHHVTLIISPS*YWETKSTWIIVP 494
Y H H+T+ ISPS Y T +I P
Sbjct: 89 YHHRHITIDISPSSYHHRHMTIVISP 114
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 417 YRHHHVTLIISPS*YWETKSTWIIVP 494
Y H H T++ISPS Y T +I P
Sbjct: 61 YHHLHTTIVISPSSYHHRHITIVISP 86
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 417 YRHHHVTLIISPS*YWETKSTWIIVP 494
Y H H+T++ISPS Y T I P
Sbjct: 75 YHHRHITIVISPSSYHHRHITIDISP 100
>SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = +3
Query: 120 LKVIILGDSGVGKTSLMNQFVNKK--FSNQYKATIGADFLTKEVIVD 254
++++ILGDS VGKT L+ Q K S ++ +I +++ +IVD
Sbjct: 19 IRIVILGDSTVGKTCLLLQLCYKSNTMSRKHLESISNNYVA-NIIVD 64
>SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08)
Length = 492
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 347 VLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL-DNRAVSVKRVNNG 520
+LV+D+T +F+ ++W AS +D + ++LGNK D+ D R VS +R G
Sbjct: 89 MLVYDITNDKSFEKHQNWIRNIEEHAS-QDVEK---MVLGNKCDMEDRRQVSKERGEQG 143
>SB_53505| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 342
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/25 (52%), Positives = 19/25 (76%)
Frame = +3
Query: 117 LLKVIILGDSGVGKTSLMNQFVNKK 191
LLKV I+G+ GK++L+NQ V +K
Sbjct: 39 LLKVAIIGEPNSGKSTLINQLVGEK 63
>SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07)
Length = 769
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +3
Query: 120 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKAT 215
+K++I GD GKT + ++ K F+ QY T
Sbjct: 226 MKIVIKGDRNTGKTCMFHRLHGKPFNEQYIPT 257
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/68 (22%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 317 VAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDL-DNRA 493
V Y+G +++ D+T P W ++ + P+ P + P ++L N+ D+ ++R
Sbjct: 275 VDVYKGTHGVLMLLDITKP--------WTFTYVRRELPKVPPHIPVLVLANRRDMEEHRL 326
Query: 494 VSVKRVNN 517
V + + +
Sbjct: 327 VDAEEITS 334
>SB_37096| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 330
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/45 (33%), Positives = 29/45 (64%)
Frame = -2
Query: 262 DSMSTITSFVRKSAPIVALYWLENFLLTN*FIRDVFPTPLSPRII 128
D++S I++F+R + V+++ + FL N F V+PT +PR++
Sbjct: 106 DALSKISAFIRDVSVSVSIHSMV-FLALNRFFAVVYPTRPAPRLL 149
>SB_37276| Best HMM Match : Ras (HMM E-Value=0.00045)
Length = 100
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/35 (31%), Positives = 23/35 (65%)
Frame = +1
Query: 538 IPYFETSAKEAVNVELAFQTIARNALAQETEAELY 642
+P+FETSA++ +NV F+ + + L + + E++
Sbjct: 40 LPFFETSAEKNINVTDCFEALVDSILEEIKQKEIF 74
>SB_20359| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4700
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 126 VIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
V +LG +G GKT ++ +NK + NQ + + D K V D
Sbjct: 2508 VFVLGPAGTGKTQVIRS-LNKTYMNQKRKPMMFDLNPKAVTAD 2549
>SB_7052| Best HMM Match : LRR_1 (HMM E-Value=2e-12)
Length = 1328
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 96 MSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADF 230
M+S +K++ +G G GKT+L+NQ + K S + I D+
Sbjct: 1105 MNSVPYYRMKLVTVGMGGRGKTTLLNQLLKSKASAPHNELIIRDW 1149
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/86 (19%), Positives = 40/86 (46%)
Frame = +2
Query: 254 HRIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPR 433
++ ++ +WD GQ++ + L +++ + V D N + + ++E
Sbjct: 58 YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVD---SNDRERVNESKEELNKMLQED 114
Query: 434 DPDNFPFVILGNKVDLDNRAVSVKRV 511
+ + +++ NK DL N A+SV +
Sbjct: 115 ELKDAVVLVMANKQDLPN-ALSVSEI 139
>SB_35974| Best HMM Match : PUF (HMM E-Value=0.00065)
Length = 422
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = -2
Query: 640 RVQLQFLVLMRCVLLFEKLALH*QLLWHLSQN----TGCRSCSGTIVDTFDRNGTI 485
RV VLM+ +L FE +A+ L HLSQ+ C + +++ + ++ TI
Sbjct: 264 RVNFHGAVLMKALLDFEHVAVFADSLLHLSQDELVLVSCNAMGSHVIEAYMKSKTI 319
>SB_58724| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 28.7 bits (61), Expect = 4.6
Identities = 20/60 (33%), Positives = 31/60 (51%)
Frame = +3
Query: 132 ILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESLRCKYGILLAKNGSNH 311
I+G SG GKT+L+N KA G D + + + V +E LR + + L N ++H
Sbjct: 169 IMGPSGAGKTTLLNTLSG-------KAYYGEDIMHRSLTV-LEVLRYQATLRLPSNMTSH 220
>SB_45651| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 28.7 bits (61), Expect = 4.6
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +2
Query: 254 HRIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDV-TAPNTFKSLESWRDEFLIQASP 430
HR +IWD GQE + + F +LV+++ LE W D S
Sbjct: 15 HREFIFKIWDFGGQEDYYATHQCFISTLSLYILVWNLEEGEEGAARLEGWLDTI----SA 70
Query: 431 RDPDNFPFVILGNKVD 478
R P + VI+G +D
Sbjct: 71 RAPGS-SLVIVGTHLD 85
>SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19)
Length = 811
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +3
Query: 120 LKVIILGDSGVGKTSLMNQFVNKKFSNQ 203
+K+++LG+SG GKTS + V + NQ
Sbjct: 261 IKLVLLGESGAGKTSCAHGLVECEAINQ 288
>SB_54819| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +3
Query: 417 YRHHHVTLIISPS*YWETKSTWIIVPFLSNVSTMV 521
Y H H+T++ SPS Y T +I P + ++ ++
Sbjct: 143 YHHRHITIVRSPSSYHHRYITIVISPISAFIAIII 177
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +3
Query: 417 YRHHHVTLIISPS*YWETKSTWIIVP 494
Y H H+T++ISPS Y T I P
Sbjct: 103 YHHRHMTIVISPSSYHHRHITIAISP 128
>SB_37124| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 60
Score = 28.7 bits (61), Expect = 4.6
Identities = 11/30 (36%), Positives = 23/30 (76%)
Frame = +3
Query: 111 KLLLKVIILGDSGVGKTSLMNQFVNKKFSN 200
K+ +KV++LG GKTSL+ ++++ +F++
Sbjct: 25 KVDVKVVLLGKEYSGKTSLVERYLHHRFND 54
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 28.7 bits (61), Expect = 4.6
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +2
Query: 254 HRIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDV-TAPNTFKSLESWRDEFLIQASP 430
HR +IWD GQE + + F +LV+++ LE W D S
Sbjct: 599 HREFIFKIWDFGGQEDYYATHQCFISTLSLYILVWNLEEGEEGAARLEGWLDTI----SA 654
Query: 431 RDPDNFPFVILGNKVD 478
R P + VI+G +D
Sbjct: 655 RAPGS-SLVIVGTHLD 669
>SB_45256| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 305
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 571 QLLWHLSQNTGCRSCSGTIVDTF 503
QLL L Q+ CR C G +VD F
Sbjct: 30 QLLPRLRQSLSCRVCRGLVVDPF 52
>SB_33756| Best HMM Match : zf-C3HC4 (HMM E-Value=0.0035)
Length = 351
Score = 28.3 bits (60), Expect = 6.1
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 571 QLLWHLSQNTGCRSCSGTIVDTF 503
QLL L Q+ CR C G +VD F
Sbjct: 30 QLLPRLRQSLSCRVCRGLVVDPF 52
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 28.3 bits (60), Expect = 6.1
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +3
Query: 120 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
+KV+ +GD VGKTS + F + A+I D +K + +D
Sbjct: 10 IKVVFVGDKNVGKTSFLYAATTHNFPTGFIASI-FDGYSKTMEID 53
>SB_16952| Best HMM Match : AAA_5 (HMM E-Value=0.47)
Length = 1345
Score = 28.3 bits (60), Expect = 6.1
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +3
Query: 126 VIILGDSGVGKTSLMNQFVNKK 191
+++ G G GKTSL+N F++K+
Sbjct: 364 ILLTGPRGCGKTSLINDFLDKQ 385
>SB_7780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Frame = +1
Query: 502 QTCQQWCQSKN-DIPYFETSAKEAVNVELAFQTIAR 606
Q ++ Q+K ++P ETS + VNV+LAF +A+
Sbjct: 210 QEVYRFAQTKKLNVPIVETSTYQNVNVDLAFVVLAQ 245
>SB_44764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 608
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/54 (24%), Positives = 29/54 (53%)
Frame = +3
Query: 81 KLLCKMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKE 242
K++C +SSR+ + + + D G+ + SL+N K ++ ++ + L +E
Sbjct: 205 KIVCSVSSRECCVEESFVGDDRGIDEASLLNALKEKGIVDEVMRSLRFEGLERE 258
>SB_32582| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1151
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +3
Query: 111 KLLLKVIILGDSGVGKTSLMNQFVNKKF 194
K++ V + GDSGVGKT+L Q V K F
Sbjct: 117 KMIRAVNLFGDSGVGKTTLA-QEVAKSF 143
>SB_26157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1097
Score = 27.9 bits (59), Expect = 8.1
Identities = 21/85 (24%), Positives = 41/85 (48%)
Frame = +2
Query: 311 LGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNKVDLDNR 490
+GV + RG+D C++V V +P E + +L +P D ++ G+ + N
Sbjct: 358 IGVQYRRGSDDCIVVNVVESPTG----EDIVEPYLRIGTPPDEEDED----GDTLSPQNE 409
Query: 491 AVSVKRVNNGARARTTSRILRQVPK 565
V+++R R R+ S++ + K
Sbjct: 410 GVTLRRGTKTPRPRSMSQVPLPIAK 434
>SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 120 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKAT 215
LK+ I+GD VGKT+L F +Y T
Sbjct: 7 LKLYIVGDGAVGKTALFITAATNTFPTEYIPT 38
>SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20)
Length = 1243
Score = 27.9 bits (59), Expect = 8.1
Identities = 22/84 (26%), Positives = 37/84 (44%), Gaps = 1/84 (1%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVT-APNTFKSLESWRDEFLIQASPRDP 439
+T+ WD AGQ + + F + + V++ T ++L SW L+ R P
Sbjct: 727 ITLSTWDLAGQSVYYAAHQMFLTPSTLYLAVWNATLGEEGVENLRSW----LLNIKARAP 782
Query: 440 DNFPFVILGNKVDLDNRAVSVKRV 511
+ +I+G +D RA RV
Sbjct: 783 YS-DVIIIGTHLDRIPRASRESRV 805
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,971,920
Number of Sequences: 59808
Number of extensions: 463959
Number of successful extensions: 1446
Number of sequences better than 10.0: 106
Number of HSP's better than 10.0 without gapping: 1257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1434
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1769412099
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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