Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00632
(683 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 153 1e-37
U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein. 79 3e-15
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 75 6e-14
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 75 6e-14
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 73 2e-13
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 72 3e-13
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 69 2e-12
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 69 2e-12
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 69 2e-12
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 69 2e-12
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 69 2e-12
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 69 4e-12
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 68 7e-12
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 67 1e-11
AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical ... 66 2e-11
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 66 3e-11
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 65 4e-11
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 65 4e-11
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 65 5e-11
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 64 7e-11
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 64 7e-11
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 64 9e-11
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 63 2e-10
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 62 4e-10
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 62 5e-10
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 62 5e-10
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 62 5e-10
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 61 6e-10
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 61 8e-10
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 61 8e-10
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 61 8e-10
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 60 1e-09
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 60 1e-09
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 60 1e-09
Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical p... 59 3e-09
DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GL... 59 3e-09
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 58 4e-09
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 57 1e-08
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 57 1e-08
Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical pr... 57 1e-08
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 57 1e-08
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 56 2e-08
Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical pr... 55 4e-08
M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein pro... 55 4e-08
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 55 5e-08
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 54 7e-08
U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein. 54 9e-08
U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding pro... 52 3e-07
U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog ... 52 3e-07
CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical ... 52 3e-07
CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical ... 52 3e-07
U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein. 52 4e-07
U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein. 51 9e-07
U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein. 50 1e-06
Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical pr... 50 2e-06
U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding pro... 50 2e-06
U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein. 50 2e-06
Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical pr... 48 6e-06
U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like prot... 48 6e-06
AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G... 48 6e-06
U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein. 47 1e-05
U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein. 47 1e-05
U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein. 47 1e-05
Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase... 46 2e-05
Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 46 3e-05
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 46 3e-05
U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like prot... 46 3e-05
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 46 3e-05
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 46 3e-05
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 46 3e-05
AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical ... 45 6e-05
X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-relat... 43 2e-04
U68261-1|AAB16976.1| 53|Caenorhabditis elegans rab19-like prot... 43 2e-04
U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical p... 43 2e-04
S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog p... 43 2e-04
L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleot... 43 2e-04
L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein pr... 43 2e-04
L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein pr... 43 2e-04
AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse e... 43 2e-04
AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death a... 43 2e-04
U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein. 41 0.001
Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical pr... 39 0.004
U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein. 39 0.004
AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical ... 37 0.015
AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical ... 36 0.020
U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific ... 36 0.036
U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylatio... 34 0.082
U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein. 33 0.14
AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical ... 33 0.19
AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death a... 33 0.25
Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical pr... 32 0.33
AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical... 32 0.33
Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical pr... 32 0.44
AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical ... 32 0.44
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 31 0.58
AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylat... 31 0.77
AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylat... 31 0.77
Z83129-6|CAB63324.1| 101|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical pr... 30 1.3
U13645-7|AAA20989.2| 598|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z82272-8|CAB05223.1| 337|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z82260-13|CAB05143.1| 337|Caenorhabditis elegans Hypothetical p... 29 2.3
Z83114-1|CAB63234.1| 549|Caenorhabditis elegans Hypothetical pr... 29 3.1
AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical ... 29 3.1
AC006762-5|AAF60553.2| 684|Caenorhabditis elegans Hypothetical ... 29 3.1
Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z49912-5|CAA90136.1| 312|Caenorhabditis elegans Hypothetical pr... 28 5.4
U40933-1|AAA81672.1| 699|Caenorhabditis elegans Bbs (bardet-bie... 28 5.4
AF067949-8|AAX88812.1| 565|Caenorhabditis elegans Peroxisomal m... 28 5.4
AF067949-7|AAO25995.2| 626|Caenorhabditis elegans Peroxisomal m... 28 5.4
AF067949-6|AAC19238.1| 598|Caenorhabditis elegans Peroxisomal m... 28 5.4
Z29117-5|CAC42271.1| 1704|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z29117-4|CAA82384.2| 1691|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z29117-3|CAA82383.2| 1689|Caenorhabditis elegans Hypothetical pr... 27 9.4
U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylati... 27 9.4
AF049142-1|AAC24116.1| 1704|Caenorhabditis elegans ATP-binding c... 27 9.4
AF039046-14|AAB94214.1| 388|Caenorhabditis elegans Prion-like-(... 27 9.4
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 153 bits (371), Expect = 1e-37
Identities = 71/93 (76%), Positives = 81/93 (87%), Gaps = 1/93 (1%)
Frame = +2
Query: 257 RIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRD 436
R VT+QIWDTAGQERFQSLGVAFYRGADCCVL FDVT +FKSL+SWRDEFLIQASPRD
Sbjct: 56 RTVTLQIWDTAGQERFQSLGVAFYRGADCCVLAFDVTNAASFKSLDSWRDEFLIQASPRD 115
Query: 437 PDNFPFVILGNKVDLDN-RAVSVKRVNNGARAR 532
PD+FPFV+LGNKVDL++ RAVS KR + + +
Sbjct: 116 PDHFPFVLLGNKVDLESQRAVSSKRAQSWCQTK 148
Score = 91.9 bits (218), Expect = 4e-19
Identities = 42/51 (82%), Positives = 49/51 (96%)
Frame = +3
Query: 102 SRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
+RKK LLKVIILGDSGVGKTSLMNQ+VN++FSNQYKATIGADFLT++V +D
Sbjct: 4 TRKKALLKVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVNID 54
Score = 64.5 bits (150), Expect = 7e-11
Identities = 30/49 (61%), Positives = 38/49 (77%), Gaps = 1/49 (2%)
Frame = +1
Query: 511 QQWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQET-EAELYNEFP 654
Q WCQ+K +IPY+E SAKEA+NVE AF IAR+ALA+E+ E + EFP
Sbjct: 142 QSWCQTKGNIPYYEVSAKEALNVEAAFLAIARDALARESQETNDFPEFP 190
>U68255-1|AAB16970.1| 70|Caenorhabditis elegans rab7-like protein.
Length = 70
Score = 79.0 bits (186), Expect = 3e-15
Identities = 41/60 (68%), Positives = 48/60 (80%), Gaps = 9/60 (15%)
Frame = +3
Query: 102 SRKKLLLKVIILGDSGVGKTSLMNQF---------VNKKFSNQYKATIGADFLTKEVIVD 254
+RKK LLKVIILGDSGVGKTSLMNQ+ VN++F NQYKATIGADFLT++V +D
Sbjct: 4 TRKKALLKVIILGDSGVGKTSLMNQYEIGDLMNQYVNRRFMNQYKATIGADFLTRDVNID 63
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 74.5 bits (175), Expect = 6e-14
Identities = 34/76 (44%), Positives = 48/76 (63%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
V +Q+WDTAGQERF+SL AF+R A +L+FD+T +F ++ W + + A PD
Sbjct: 65 VLLQLWDTAGQERFRSLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQLKVHAYCEQPD 124
Query: 443 NFPFVILGNKVDLDNR 490
+I GNK DL+NR
Sbjct: 125 ---IIICGNKADLENR 137
Score = 50.8 bits (116), Expect = 9e-07
Identities = 20/44 (45%), Positives = 33/44 (75%)
Frame = +3
Query: 117 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVI 248
L+K + LGDSGVGKTS ++++ + F+ Q+ +T+G DF K+V+
Sbjct: 7 LIKFLALGDSGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVV 50
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 74.5 bits (175), Expect = 6e-14
Identities = 34/76 (44%), Positives = 48/76 (63%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
V +Q+WDTAGQERF+SL AF+R A +L+FD+T +F ++ W + + A PD
Sbjct: 65 VLLQLWDTAGQERFRSLTTAFFRDAMGFILIFDITNEQSFLNIRDWLSQLKVHAYCEQPD 124
Query: 443 NFPFVILGNKVDLDNR 490
+I GNK DL+NR
Sbjct: 125 ---IIICGNKADLENR 137
Score = 50.8 bits (116), Expect = 9e-07
Identities = 20/44 (45%), Positives = 33/44 (75%)
Frame = +3
Query: 117 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVI 248
L+K + LGDSGVGKTS ++++ + F+ Q+ +T+G DF K+V+
Sbjct: 7 LIKFLALGDSGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVV 50
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 72.9 bits (171), Expect = 2e-13
Identities = 39/106 (36%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
+ +IWDTAGQER+ SL +YRGA ++V+D+T +F+ ++W E QASP
Sbjct: 68 IKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASP---- 123
Query: 443 NFPFVILGNKVDLDN-RAVSVKRVNNGARARTTSRILRQVPKKLSM 577
N + GNK D+ N R V + N A A + + + K SM
Sbjct: 124 NIVMALAGNKADVANKRTVEYEEAN--AYAEDNALLFMETSAKTSM 167
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/49 (42%), Positives = 36/49 (73%)
Frame = +3
Query: 123 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESLR 269
K+++LG+S VGK+SL+ +FV +F ++TIGA FLT+ V +D +++
Sbjct: 21 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDATIK 69
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 72.1 bits (169), Expect = 3e-13
Identities = 39/102 (38%), Positives = 57/102 (55%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
+ +QIWDTAGQE F+S+ ++YRGA +LV+D+T +TF L SW ++ A
Sbjct: 55 IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTSWLED----ARQHSNS 110
Query: 443 NFPFVILGNKVDLDNRAVSVKRVNNGARARTTSRILRQVPKK 568
N +++GNK DL+ R VKR A AR + + K
Sbjct: 111 NMVIMLIGNKSDLEARR-EVKREEGEAFAREHGLVFMETSAK 151
Score = 47.6 bits (108), Expect = 8e-06
Identities = 21/51 (41%), Positives = 34/51 (66%)
Frame = +3
Query: 117 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESLR 269
L K II+GD+GVGK+ L+ QF +K+F + TIG +F + V +D + ++
Sbjct: 6 LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIK 56
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 69.3 bits (162), Expect = 2e-12
Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Frame = +2
Query: 227 FSHKRSNR*HRIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRD 406
F K R + V +QIWDTAGQER++++ A+YRGA +L++D+T +F S++ W
Sbjct: 59 FKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDW-- 116
Query: 407 EFLIQASPRDPDNFPFVILGNKVDLDN-RAVSVKR 508
Q +N V++GNK D+D+ R VS+ R
Sbjct: 117 --CTQIKTYSWENAQVVLVGNKCDMDSERVVSMDR 149
Score = 41.5 bits (93), Expect = 5e-04
Identities = 16/43 (37%), Positives = 30/43 (69%)
Frame = +3
Query: 117 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEV 245
+ K++I+G+S VGKTS + ++ + F++ + +T+G DF K V
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTV 64
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 538 IPYFETSAKEAVNVELAFQTI 600
+ +FETSAKE +NV+ F+ +
Sbjct: 159 LEFFETSAKENINVKAVFEKL 179
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 69.3 bits (162), Expect = 2e-12
Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Frame = +2
Query: 227 FSHKRSNR*HRIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRD 406
F K R + V +QIWDTAGQER++++ A+YRGA +L++D+T +F S++ W
Sbjct: 59 FKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDW-- 116
Query: 407 EFLIQASPRDPDNFPFVILGNKVDLDN-RAVSVKR 508
Q +N V++GNK D+D+ R VS+ R
Sbjct: 117 --CTQIKTYSWENAQVVLVGNKCDMDSERVVSMDR 149
Score = 41.5 bits (93), Expect = 5e-04
Identities = 16/43 (37%), Positives = 30/43 (69%)
Frame = +3
Query: 117 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEV 245
+ K++I+G+S VGKTS + ++ + F++ + +T+G DF K V
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTV 64
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 538 IPYFETSAKEAVNVELAFQTI 600
+ +FETSAKE +NV+ F+ +
Sbjct: 159 LEFFETSAKENINVKAVFEKL 179
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 69.3 bits (162), Expect = 2e-12
Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Frame = +2
Query: 227 FSHKRSNR*HRIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRD 406
F K R + V +QIWDTAGQER++++ A+YRGA +L++D+T +F S++ W
Sbjct: 59 FKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDW-- 116
Query: 407 EFLIQASPRDPDNFPFVILGNKVDLDN-RAVSVKR 508
Q +N V++GNK D+D+ R VS+ R
Sbjct: 117 --CTQIKTYSWENAQVVLVGNKCDMDSERVVSMDR 149
Score = 41.5 bits (93), Expect = 5e-04
Identities = 16/43 (37%), Positives = 30/43 (69%)
Frame = +3
Query: 117 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEV 245
+ K++I+G+S VGKTS + ++ + F++ + +T+G DF K V
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTV 64
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 538 IPYFETSAKEAVNVELAFQTI 600
+ +FETSAKE +NV+ F+ +
Sbjct: 159 LEFFETSAKENINVKAVFEKL 179
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 69.3 bits (162), Expect = 2e-12
Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Frame = +2
Query: 227 FSHKRSNR*HRIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRD 406
F K R + V +QIWDTAGQER++++ A+YRGA +L++D+T +F S++ W
Sbjct: 73 FKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDW-- 130
Query: 407 EFLIQASPRDPDNFPFVILGNKVDLDN-RAVSVKR 508
Q +N V++GNK D+D+ R VS+ R
Sbjct: 131 --CTQIKTYSWENAQVVLVGNKCDMDSERVVSMDR 163
Score = 41.5 bits (93), Expect = 5e-04
Identities = 16/43 (37%), Positives = 30/43 (69%)
Frame = +3
Query: 117 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEV 245
+ K++I+G+S VGKTS + ++ + F++ + +T+G DF K V
Sbjct: 36 MFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTV 78
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 538 IPYFETSAKEAVNVELAFQTI 600
+ +FETSAKE +NV+ F+ +
Sbjct: 173 LEFFETSAKENINVKAVFEKL 193
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 69.3 bits (162), Expect = 2e-12
Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Frame = +2
Query: 227 FSHKRSNR*HRIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRD 406
F K R + V +QIWDTAGQER++++ A+YRGA +L++D+T +F S++ W
Sbjct: 59 FKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDW-- 116
Query: 407 EFLIQASPRDPDNFPFVILGNKVDLDN-RAVSVKR 508
Q +N V++GNK D+D+ R VS+ R
Sbjct: 117 --CTQIKTYSWENAQVVLVGNKCDMDSERVVSMDR 149
Score = 41.5 bits (93), Expect = 5e-04
Identities = 16/43 (37%), Positives = 30/43 (69%)
Frame = +3
Query: 117 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEV 245
+ K++I+G+S VGKTS + ++ + F++ + +T+G DF K V
Sbjct: 22 MFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTV 64
Score = 27.5 bits (58), Expect = 9.4
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +1
Query: 538 IPYFETSAKEAVNVELAFQTI 600
+ +FETSAKE +NV+ F+ +
Sbjct: 159 LEFFETSAKENINVKAVFEKL 179
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 68.5 bits (160), Expect = 4e-12
Identities = 31/83 (37%), Positives = 48/83 (57%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
+ +WDTAGQE+F L +Y C +++FDVTA T+K++ +W + R +
Sbjct: 58 IRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWHRDL-----ARVCE 112
Query: 443 NFPFVILGNKVDLDNRAVSVKRV 511
N P V+ GNKVD+ +R V K +
Sbjct: 113 NIPIVLCGNKVDVKDRKVKAKTI 135
Score = 35.9 bits (79), Expect = 0.027
Identities = 12/35 (34%), Positives = 24/35 (68%)
Frame = +3
Query: 123 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGAD 227
K++++GD G GKT+ + + + +F +Y AT+G +
Sbjct: 11 KLVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE 45
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 67.7 bits (158), Expect = 7e-12
Identities = 32/79 (40%), Positives = 50/79 (63%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
V + IWDTAGQERF++L ++YRGA + V+DVT+ ++F+ L W E + D
Sbjct: 60 VKLAIWDTAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNHWMQEVDTYCT---ND 116
Query: 443 NFPFVILGNKVDLDNRAVS 499
N +++ NK+D+ NR V+
Sbjct: 117 NIIKMMVANKIDMPNRVVT 135
Score = 50.8 bits (116), Expect = 9e-07
Identities = 24/52 (46%), Positives = 34/52 (65%)
Frame = +3
Query: 99 SSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
SS LK++I+G+SGVGK+SLM +FV+ F + ATIG DF + +D
Sbjct: 5 SSSPLTTLKILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMAID 56
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 66.9 bits (156), Expect = 1e-11
Identities = 35/85 (41%), Positives = 54/85 (63%)
Frame = +2
Query: 227 FSHKRSNR*HRIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRD 406
F K N R V +Q+WDTAGQERF+SL +++R AD +LV+DV A +F + W
Sbjct: 498 FHVKTVNVDGRNVALQLWDTAGQERFRSLCKSYFRRADGAILVYDVCAEQSFLRVRDW-I 556
Query: 407 EFLIQASPRDPDNFPFVILGNKVDL 481
E + +++ R + P +++GNKVD+
Sbjct: 557 ETIKESTER---SIPIILVGNKVDM 578
Score = 44.4 bits (100), Expect = 8e-05
Identities = 17/44 (38%), Positives = 31/44 (70%)
Frame = +3
Query: 123 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
++++ GD+ VGK+S + + + ++F+NQ +T+G DF K V VD
Sbjct: 463 RIVMCGDAAVGKSSFVMRVIRRQFTNQLPSTLGVDFHVKTVNVD 506
>AL132865-6|CAB60605.1| 210|Caenorhabditis elegans Hypothetical
protein Y62E10A.9 protein.
Length = 210
Score = 66.1 bits (154), Expect = 2e-11
Identities = 35/90 (38%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
V +QIWDT GQERF+++ ++YR A+ VL +D+T +F SL+ W D+ A+P
Sbjct: 59 VKLQIWDTGGQERFRTITQSYYRSANGIVLCYDITCKQSFGSLQRWIDDVSKFAAP---- 114
Query: 443 NFPFVILGNKVDL-DNRAVSVKRVNNGARA 529
N +++G K DL D RA+ + RA
Sbjct: 115 NVVKLLIGTKCDLEDQRAIEAEEAEMLQRA 144
Score = 48.0 bits (109), Expect = 6e-06
Identities = 20/46 (43%), Positives = 31/46 (67%)
Frame = +3
Query: 117 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
L K++++GD GVGKT ++ +F N F ++ TIG DF K ++VD
Sbjct: 10 LFKIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVD 55
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 65.7 bits (153), Expect = 3e-11
Identities = 30/76 (39%), Positives = 48/76 (63%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
+ +QIWDTAGQERF+++ ++YRGA ++V+D+T +T+ L SW L A
Sbjct: 60 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSW----LADAKSLTNP 115
Query: 443 NFPFVILGNKVDLDNR 490
N ++GNK DL+++
Sbjct: 116 NTAIFLIGNKADLEDQ 131
Score = 46.0 bits (104), Expect = 3e-05
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = +3
Query: 117 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESLRCKYGI 284
+ K II+GD GVGK+ L++QF KKF TIG +F T+ I+++ + K I
Sbjct: 11 IFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTR--IIEVSGQKIKLQI 64
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 65.3 bits (152), Expect = 4e-11
Identities = 29/74 (39%), Positives = 46/74 (62%)
Frame = +2
Query: 260 IVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDP 439
+V +Q+WDTAGQERF+ + + R AD ++V+DVT NTF+ +E W + + D
Sbjct: 104 VVRLQVWDTAGQERFRCMVPMYMRNADAALIVYDVTDRNTFEDVEKWLKDLDRSSGTEDA 163
Query: 440 DNFPFVILGNKVDL 481
+ + ++GNK DL
Sbjct: 164 NVY---LIGNKTDL 174
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/52 (42%), Positives = 31/52 (59%)
Frame = +3
Query: 99 SSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
S+ K KV++LGDSGVGKTS++ + ATIGA F++ +V D
Sbjct: 46 STAPKHKAKVVVLGDSGVGKTSIIYRHRYGAHYRPVNATIGASFVSFDVGAD 97
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 65.3 bits (152), Expect = 4e-11
Identities = 32/76 (42%), Positives = 50/76 (65%)
Frame = +2
Query: 254 HRIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPR 433
+R + MQ+WDTAGQERF+S+ ++R AD VL+FDVT+ +F ++ +W D ++A
Sbjct: 249 NRAIAMQLWDTAGQERFRSITKQYFRKADGVVLMFDVTSEQSFLNVRNWIDS--VRAGVD 306
Query: 434 DPDNFPFVILGNKVDL 481
D ++GNK+DL
Sbjct: 307 DAT--VMCLVGNKMDL 320
Score = 45.2 bits (102), Expect = 4e-05
Identities = 18/41 (43%), Positives = 27/41 (65%)
Frame = +3
Query: 117 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTK 239
+ KV+ +GDS VGKT +++F + +F + ATIG DF K
Sbjct: 202 IFKVVFVGDSAVGKTCFLHRFCHNRFKPLFNATIGVDFTVK 242
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 64.9 bits (151), Expect = 5e-11
Identities = 33/90 (36%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Frame = +2
Query: 257 RIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRD 436
+ + +QIWDTAGQERF+++ ++YRGA ++V+D+T TF +++ W E A
Sbjct: 58 KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYAC--- 114
Query: 437 PDNFPFVILGNKVDLD-NRAVSVKRVNNGA 523
+N +++GNK DL RAV + + A
Sbjct: 115 -ENVNKLLVGNKCDLTAKRAVETQAAQDYA 143
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/61 (31%), Positives = 39/61 (63%)
Frame = +3
Query: 87 LCKMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESL 266
+ M+ L K++++GDSGVGK+ L+ +F + ++ Y +TIG DF + + +D +++
Sbjct: 1 MAAMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI 60
Query: 267 R 269
+
Sbjct: 61 K 61
Score = 31.9 bits (69), Expect = 0.44
Identities = 14/22 (63%), Positives = 17/22 (77%)
Frame = +1
Query: 538 IPYFETSAKEAVNVELAFQTIA 603
IP+ ETSAK + NVE AF T+A
Sbjct: 148 IPFLETSAKSSTNVEQAFLTMA 169
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 64.5 bits (150), Expect = 7e-11
Identities = 28/76 (36%), Positives = 49/76 (64%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
+ +QIWDTAGQERF+++ A+YRGA +LV+D+T +F+++++W +
Sbjct: 57 IKLQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNW----IRNIEEHAAS 112
Query: 443 NFPFVILGNKVDLDNR 490
+ +I+GNK D++ R
Sbjct: 113 DVERMIIGNKCDIEER 128
Score = 48.0 bits (109), Expect = 6e-06
Identities = 20/58 (34%), Positives = 38/58 (65%)
Frame = +3
Query: 96 MSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESLR 269
M+ L K++++GDSGVGKT ++ +F + F+N + +TIG DF + + +D + ++
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIK 58
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 64.5 bits (150), Expect = 7e-11
Identities = 28/76 (36%), Positives = 49/76 (64%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
+ +QIWDTAGQERF+++ A+YRGA +LV+D+T +F+++++W +
Sbjct: 57 IKLQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNW----IRNIEEHAAS 112
Query: 443 NFPFVILGNKVDLDNR 490
+ +I+GNK D++ R
Sbjct: 113 DVERMIIGNKCDIEER 128
Score = 48.0 bits (109), Expect = 6e-06
Identities = 20/58 (34%), Positives = 38/58 (65%)
Frame = +3
Query: 96 MSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESLR 269
M+ L K++++GDSGVGKT ++ +F + F+N + +TIG DF + + +D + ++
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIK 58
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 64.1 bits (149), Expect = 9e-11
Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
+ +QIWDTAGQERF ++ ++YRGA +LV+D+T +F ++ W AS +
Sbjct: 58 IKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHAS----E 113
Query: 443 NFPFVILGNKVDL-DNRAVSVKR 508
+ +ILGNK D+ D R VS +R
Sbjct: 114 DVVKMILGNKCDMSDRRVVSRER 136
Score = 45.2 bits (102), Expect = 4e-05
Identities = 18/44 (40%), Positives = 31/44 (70%)
Frame = +3
Query: 114 LLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEV 245
+L K++++GDSGVGKT ++ +F + F+ + +TIG DF K +
Sbjct: 8 MLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTI 51
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 63.3 bits (147), Expect = 2e-10
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Frame = +2
Query: 257 RIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRD 436
R + +Q+WDTAGQERF+SL ++ R + V+V+D+T N+F W D+ + R
Sbjct: 58 RTIRLQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNANSFHQTTKWVDDV---RNERG 114
Query: 437 PDNFPFVILGNKVDL-DNRAVSVKRVNNGAR 526
D V++GNK DL D R VS + AR
Sbjct: 115 CDVI-IVLVGNKTDLADKRQVSTEDGEKKAR 144
Score = 52.0 bits (119), Expect = 4e-07
Identities = 21/49 (42%), Positives = 35/49 (71%)
Frame = +3
Query: 123 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESLR 269
K++ LG+ VGKTS++ +F+ F N Y+ATIG DFL+K + ++ ++R
Sbjct: 13 KLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIR 61
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 62.1 bits (144), Expect = 4e-10
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Frame = +2
Query: 257 RIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRD 436
+ V QIWDTAGQER++++ A+YRGA +LV+D+ T++++E W E A
Sbjct: 58 KTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHAD--- 114
Query: 437 PDNFPFVILGNKVDLDN-RAV 496
N +++GNK DL + RAV
Sbjct: 115 -QNIVIMLVGNKSDLRHLRAV 134
Score = 53.2 bits (122), Expect = 2e-07
Identities = 20/53 (37%), Positives = 41/53 (77%)
Frame = +3
Query: 117 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESLRCK 275
L KV+++GDSGVGK++L+++F +F+ + K+TIG +F T+ + V+ ++++ +
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQ 63
Score = 27.5 bits (58), Expect = 9.4
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 529 KNDIPYFETSAKEAVNVELAFQTI 600
+N + + ETSA ++ NVE AF I
Sbjct: 145 RNQLSFIETSALDSTNVEAAFTNI 168
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 61.7 bits (143), Expect = 5e-10
Identities = 25/76 (32%), Positives = 46/76 (60%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
V +Q+WDTAGQE+F+S+ ++YR + + ++D T +F+ +E+W E + P
Sbjct: 67 VKLQLWDTAGQEKFRSITKSYYRNSVGVLAIYDTTNRESFEHVENWVKEAALNLGGPSPS 126
Query: 443 NFPFVILGNKVDLDNR 490
F ++G K D+D++
Sbjct: 127 KCVFQLVGTKSDMDSQ 142
Score = 37.1 bits (82), Expect = 0.012
Identities = 15/41 (36%), Positives = 25/41 (60%)
Frame = +3
Query: 123 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEV 245
++I++GDS VGK+SL+ F K + T+G DF + +
Sbjct: 19 RLIVIGDSTVGKSSLLRYFTEGKMAEISDPTVGVDFYARMI 59
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 61.7 bits (143), Expect = 5e-10
Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
+ +QIWDTAGQERF+S+ ++YR A VLV+DV+ +F L W E A+ R
Sbjct: 56 IKLQIWDTAGQERFRSITQSYYRSAHAIVLVYDVSCQPSFDCLPEWLGEIESYANRR--- 112
Query: 443 NFPFVILGNKVDL-DNRAV 496
+++GNKVD D R V
Sbjct: 113 -VLKILVGNKVDKGDEREV 130
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/53 (41%), Positives = 33/53 (62%)
Frame = +3
Query: 111 KLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESLR 269
K L KV+++G++GVGKT L+ +F F ATIG DF+ K V V + ++
Sbjct: 5 KYLFKVVLVGNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKVGNDKIK 57
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 61.7 bits (143), Expect = 5e-10
Identities = 29/73 (39%), Positives = 46/73 (63%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
V + IWDTAGQERF++L ++YRGA + V+DVT+ ++F+ L W E + D
Sbjct: 33 VKLAIWDTAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNHWMQEVDTYCT---ND 89
Query: 443 NFPFVILGNKVDL 481
N +++ NK+D+
Sbjct: 90 NIIKMMVANKIDM 102
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 61.3 bits (142), Expect = 6e-10
Identities = 37/102 (36%), Positives = 55/102 (53%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
V + +WDT GQERF+SL ++YR A +LV+D+T+ +F LE W + DPD
Sbjct: 55 VKLHVWDTCGQERFRSLVGSYYRHAIGALLVYDITSRESFYHLEHWLTDL---QRLGDPD 111
Query: 443 NFPFVILGNKVDLDNRAVSVKRVNNGARARTTSRILRQVPKK 568
V++GNK DL+ V++ A AR I ++ K
Sbjct: 112 -IVIVLIGNKSDLEADR-EVRKEEGEAFAREFGLIFMEISAK 151
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/51 (31%), Positives = 35/51 (68%)
Frame = +3
Query: 117 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESLR 269
+ K +I+GD GVGK++L+ +F+ K F + + +T+G +F + + +D + ++
Sbjct: 6 VFKYVIIGDRGVGKSNLLLRFIGKPFDSIHPSTLGIEFGFRNLEIDRKKVK 56
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 60.9 bits (141), Expect = 8e-10
Identities = 33/82 (40%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Frame = +2
Query: 257 RIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRD 436
R V +Q+WDTAGQERF+SL ++ R + V+V+D+T N+F W D+ + R
Sbjct: 57 RTVRLQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNSNSFHQTSKWIDDV---RTERG 113
Query: 437 PDNFPFVILGNKVDL-DNRAVS 499
D +++GNK DL D R V+
Sbjct: 114 SDVI-IMLVGNKTDLSDKRQVT 134
Score = 52.4 bits (120), Expect = 3e-07
Identities = 22/49 (44%), Positives = 35/49 (71%)
Frame = +3
Query: 123 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESLR 269
K++ LG+ VGKTSL+ +F+ F N Y+ATIG DFL+K + ++ ++R
Sbjct: 12 KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVR 60
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 60.9 bits (141), Expect = 8e-10
Identities = 32/78 (41%), Positives = 47/78 (60%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
V +QIWDTAGQERF+S+ ++YR AD +LV+D+ +F++ +W L Q +
Sbjct: 52 VKLQIWDTAGQERFRSVTTSYYRDADALLLVYDIANRASFENCRNW----LSQIKEYGKE 107
Query: 443 NFPFVILGNKVDLDNRAV 496
++GNK DL RAV
Sbjct: 108 AVQVTLVGNKCDLP-RAV 124
Score = 36.7 bits (81), Expect = 0.015
Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = +3
Query: 114 LLLKVIILGDSGVGKTSLMNQFVNKKF-SNQYKATIGADFLTK 239
+ LKV++LGDS GKT L+ ++ + F +N + +T+G D+ K
Sbjct: 1 MFLKVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNK 43
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 538 IPYFETSAKEAVNVELAFQTIARNAL 615
IP+ ETSAK NV+ AF +A L
Sbjct: 138 IPFMETSAKTGFNVDRAFLGLAERML 163
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 60.9 bits (141), Expect = 8e-10
Identities = 32/78 (41%), Positives = 47/78 (60%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
V +QIWDTAGQERF+S+ ++YR AD +LV+D+ +F++ +W L Q +
Sbjct: 52 VKLQIWDTAGQERFRSVTTSYYRDADALLLVYDIANRASFENCRNW----LSQIKEYGKE 107
Query: 443 NFPFVILGNKVDLDNRAV 496
++GNK DL RAV
Sbjct: 108 AVQVTLVGNKCDLP-RAV 124
Score = 36.7 bits (81), Expect = 0.015
Identities = 17/43 (39%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Frame = +3
Query: 114 LLLKVIILGDSGVGKTSLMNQFVNKKF-SNQYKATIGADFLTK 239
+ LKV++LGDS GKT L+ ++ + F +N + +T+G D+ K
Sbjct: 1 MFLKVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNK 43
Score = 28.3 bits (60), Expect = 5.4
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +1
Query: 538 IPYFETSAKEAVNVELAFQTIARNAL 615
IP+ ETSAK NV+ AF +A L
Sbjct: 138 IPFMETSAKTGFNVDRAFLGLAERML 163
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 60.5 bits (140), Expect = 1e-09
Identities = 26/72 (36%), Positives = 48/72 (66%)
Frame = +2
Query: 269 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNF 448
+ IWDTAGQE++ +LG +YRG++ +LVFD+T +F+ +++W +++ +
Sbjct: 63 LHIWDTAGQEKYHALGPIYYRGSNGVLLVFDITDRKSFEKVKNW----VLEIKTCLGNTA 118
Query: 449 PFVILGNKVDLD 484
+I+GNK+DL+
Sbjct: 119 EILIVGNKIDLE 130
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/50 (42%), Positives = 33/50 (66%)
Frame = +3
Query: 105 RKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
+K K+++LG+ VGK+SL+ +FV KFS ++ +TI A F K V V+
Sbjct: 8 QKSFKFKIVLLGEGCVGKSSLVLRFVENKFSCKHLSTIQASFQNKTVNVE 57
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 60.1 bits (139), Expect = 1e-09
Identities = 22/46 (47%), Positives = 37/46 (80%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESW 400
+ +QIWDTAGQERF+++ A+YRGA +LV+D+T +F+++++W
Sbjct: 57 IKLQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNW 102
Score = 48.0 bits (109), Expect = 6e-06
Identities = 20/58 (34%), Positives = 38/58 (65%)
Frame = +3
Query: 96 MSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESLR 269
M+ L K++++GDSGVGKT ++ +F + F+N + +TIG DF + + +D + ++
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIK 58
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 60.1 bits (139), Expect = 1e-09
Identities = 30/78 (38%), Positives = 48/78 (61%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
V +QIWDTAGQERF+++ +YRG V+V+DVT +F +++ W +Q + D
Sbjct: 59 VKLQIWDTAGQERFRTITSTYYRGTHGVVVVYDVTNGESFGNVKRW-----LQEIENNCD 113
Query: 443 NFPFVILGNKVDLDNRAV 496
+ V++GNK + + R V
Sbjct: 114 SVQKVLVGNKCEENERRV 131
Score = 50.4 bits (115), Expect = 1e-06
Identities = 27/56 (48%), Positives = 35/56 (62%)
Frame = +3
Query: 117 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESLRCKYGI 284
L K++I+GDSGVGK+SL+ +F + FS Y TIG DF K +DI R K I
Sbjct: 10 LFKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDF--KIRTMDINGQRVKLQI 63
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/30 (53%), Positives = 19/30 (63%)
Frame = +1
Query: 511 QQWCQSKNDIPYFETSAKEAVNVELAFQTI 600
+ + QS N I +FETSAKE NVE F I
Sbjct: 138 RNYAQSMN-ISFFETSAKEDKNVEPMFTCI 166
>Z48621-11|CAE17932.2| 212|Caenorhabditis elegans Hypothetical
protein R07B1.12 protein.
Length = 212
Score = 58.8 bits (136), Expect = 3e-09
Identities = 25/56 (44%), Positives = 39/56 (69%)
Frame = +3
Query: 87 LCKMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
+ +++ K+ KV+++GD GVGKTS++ +FV+ FS+ YK TIG DF K + VD
Sbjct: 1 MAALTNNDKISYKVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVD 56
Score = 56.4 bits (130), Expect = 2e-08
Identities = 23/77 (29%), Positives = 42/77 (54%)
Frame = +2
Query: 260 IVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDP 439
+V +QIWD +GQ+R+ + +Y+ A ++V D T T + W+ + + + D
Sbjct: 60 VVHLQIWDISGQDRYGVMTRVYYKDAHAAIIVLDSTRERTIEGALRWKTDLDQKVTLADG 119
Query: 440 DNFPFVILGNKVDLDNR 490
P ++L NK D+DN+
Sbjct: 120 SPVPAILLANKCDIDNK 136
>DQ016970-1|AAY42967.1| 212|Caenorhabditis elegans Rab GTPase GLO-1
protein.
Length = 212
Score = 58.8 bits (136), Expect = 3e-09
Identities = 25/56 (44%), Positives = 39/56 (69%)
Frame = +3
Query: 87 LCKMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
+ +++ K+ KV+++GD GVGKTS++ +FV+ FS+ YK TIG DF K + VD
Sbjct: 1 MAALTNNDKISYKVLVIGDPGVGKTSIIRRFVHNVFSSNYKTTIGVDFALKILPVD 56
Score = 56.4 bits (130), Expect = 2e-08
Identities = 23/77 (29%), Positives = 42/77 (54%)
Frame = +2
Query: 260 IVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDP 439
+V +QIWD +GQ+R+ + +Y+ A ++V D T T + W+ + + + D
Sbjct: 60 VVHLQIWDISGQDRYGVMTRVYYKDAHAAIIVLDSTRERTIEGALRWKTDLDQKVTLADG 119
Query: 440 DNFPFVILGNKVDLDNR 490
P ++L NK D+DN+
Sbjct: 120 SPVPAILLANKCDIDNK 136
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 58.4 bits (135), Expect = 4e-09
Identities = 29/74 (39%), Positives = 44/74 (59%)
Frame = +2
Query: 257 RIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRD 436
+ V QIWDTAGQER++++ A+YRGA +LV+D+ T++++E W E A
Sbjct: 58 KTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHAD--- 114
Query: 437 PDNFPFVILGNKVD 478
N + +GNK D
Sbjct: 115 -QNIVIMPVGNKCD 127
Score = 52.4 bits (120), Expect = 3e-07
Identities = 20/53 (37%), Positives = 40/53 (75%)
Frame = +3
Query: 117 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESLRCK 275
L KV+++GDSGVGK++L+++F +F + K+TIG +F T+ + V+ ++++ +
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATRSISVEGKTVKAQ 63
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/77 (36%), Positives = 46/77 (59%)
Frame = +2
Query: 257 RIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRD 436
+ V +QIWDTAG ERF+ ++YRGA +LV+D++ T++S+E W A+
Sbjct: 55 KAVKVQIWDTAGMERFRCGASSYYRGALGALLVYDISKHKTYESVEQWLKVLRDHAN--- 111
Query: 437 PDNFPFVILGNKVDLDN 487
++ ++GNK DL +
Sbjct: 112 -EDIVITLVGNKSDLSH 127
Score = 47.6 bits (108), Expect = 8e-06
Identities = 19/58 (32%), Positives = 40/58 (68%)
Frame = +3
Query: 96 MSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESLR 269
M + L K++++G+ GVGK++L+++F +F+ + K TIG +F TK + V+ ++++
Sbjct: 1 MGNEYYYLFKIVLIGNPGVGKSNLLSRFTRNEFNLKSKPTIGVEFATKIISVEGKAVK 58
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 57.2 bits (132), Expect = 1e-08
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +2
Query: 254 HRIVTMQIWDTAGQERF-QSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASP 430
+ ++ +Q+WDTAGQER+ QS+ +YR + V V+DVT +F L W E
Sbjct: 146 NELLRVQLWDTAGQERYRQSIVAHYYRNVNAVVFVYDVTCRESFNDLALWIKECEKHGLV 205
Query: 431 RDPDNFPFVILGNKVDLD 484
D + P +++GNK D++
Sbjct: 206 GDSE-VPRILIGNKCDVE 222
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/55 (40%), Positives = 34/55 (61%)
Frame = +3
Query: 105 RKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESLR 269
++K KVII+G++ VGKT L +F +F +ATIG DF + +++ E LR
Sbjct: 96 KQKRTFKVIIVGNAAVGKTCLSFRFCCGRFPEHTEATIGVDFRERSCVIENELLR 150
>Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical
protein C27B7.8 protein.
Length = 188
Score = 56.8 bits (131), Expect = 1e-08
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Frame = +2
Query: 269 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNF 448
++I DTAG E+F ++ + + VLV+ +TA +TF L RD+ L +D D
Sbjct: 53 LEILDTAGTEQFTAMRDLYMKNGQGFVLVYSITAQSTFNDLMDLRDQIL---RVKDTDEV 109
Query: 449 PFVILGNKVDL-DNRAVSVKRVNNGAR 526
P +++GNK DL D R V + N AR
Sbjct: 110 PMILVGNKCDLEDERVVGKDQGQNLAR 136
Score = 37.9 bits (84), Expect = 0.007
Identities = 20/44 (45%), Positives = 27/44 (61%)
Frame = +3
Query: 123 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
K+++LG GVGK++L QFV F +Y TI D K+V VD
Sbjct: 5 KIVVLGSGGVGKSALTVQFVQGIFVEKYDPTI-EDSYRKQVEVD 47
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 56.8 bits (131), Expect = 1e-08
Identities = 28/70 (40%), Positives = 43/70 (61%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
+ +QIWDTAGQERF ++ ++YRGA +LV+D+T +F ++ W AS +
Sbjct: 58 IKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHAS----E 113
Query: 443 NFPFVILGNK 472
+ +ILGNK
Sbjct: 114 DVVKMILGNK 123
Score = 45.2 bits (102), Expect = 4e-05
Identities = 18/44 (40%), Positives = 31/44 (70%)
Frame = +3
Query: 114 LLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEV 245
+L K++++GDSGVGKT ++ +F + F+ + +TIG DF K +
Sbjct: 8 MLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTI 51
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 56.0 bits (129), Expect = 2e-08
Identities = 27/73 (36%), Positives = 41/73 (56%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
V +++WDT GQE F+S+ A+YR A +LV+D+T +F LE W + P
Sbjct: 55 VRLRVWDTCGQENFRSIIRAYYRNALGALLVYDITCRKSFVHLEQWLSDLRQHGHP---- 110
Query: 443 NFPFVILGNKVDL 481
+++GNK DL
Sbjct: 111 EMVIMLIGNKSDL 123
Score = 41.5 bits (93), Expect = 5e-04
Identities = 17/53 (32%), Positives = 34/53 (64%)
Frame = +3
Query: 117 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESLRCK 275
+ K +I+GD GVGK++L+ +F ++ F + T+G +F K++ +D +R +
Sbjct: 6 MFKYVIIGDGGVGKSNLLLRFTDELFDPIHTTTLGVEFGYKDLQIDKYKVRLR 58
>Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical
protein ZK792.6 protein.
Length = 184
Score = 55.2 bits (127), Expect = 4e-08
Identities = 27/86 (31%), Positives = 51/86 (59%)
Frame = +2
Query: 269 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNF 448
+ I DTAGQE + ++ + R + +LVF V +F+++ ++R++ +D D+
Sbjct: 53 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNEAKSFENVANYREQI---RRVKDSDDV 109
Query: 449 PFVILGNKVDLDNRAVSVKRVNNGAR 526
P V++GNK DL +R+V + V+ A+
Sbjct: 110 PMVLVGNKCDLSSRSVDFRTVSETAK 135
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +3
Query: 123 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIES 263
K++++GD GVGK++L Q + F +Y TI D K+V++D E+
Sbjct: 5 KLVVVGDGGVGKSALTIQLIQNHFVEEYDPTI-EDSYRKQVVIDGET 50
>M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein
protein.
Length = 187
Score = 55.2 bits (127), Expect = 4e-08
Identities = 27/86 (31%), Positives = 51/86 (59%)
Frame = +2
Query: 269 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNF 448
+ I DTAGQE + ++ + R + +LVF V +F+++ ++R++ +D D+
Sbjct: 56 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNEAKSFENVANYREQI---RRVKDSDDV 112
Query: 449 PFVILGNKVDLDNRAVSVKRVNNGAR 526
P V++GNK DL +R+V + V+ A+
Sbjct: 113 PMVLVGNKCDLSSRSVDFRTVSETAK 138
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/47 (38%), Positives = 30/47 (63%)
Frame = +3
Query: 123 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIES 263
K++++GD GVGK++L Q + F +Y TI D K+V++D E+
Sbjct: 8 KLVVVGDGGVGKSALTIQLIQNHFVEEYDPTI-EDSYRKQVVIDGET 53
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 54.8 bits (126), Expect = 5e-08
Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 5/109 (4%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
+ +Q+WDTAGQERF+ L A+ R A +LV D++ N + L W+ +I + D
Sbjct: 56 IRLQLWDTAGQERFRQLAPAYIRSARVALLVIDLSDENCVEHLIRWKG--IIDKNKSDFT 113
Query: 443 NFPFVILGNKVDL-----DNRAVSVKRVNNGARARTTSRILRQVPKKLS 574
+ +I+GNK DL R ++ R N T++++ + + K S
Sbjct: 114 S--TIIVGNKHDLVSEKRSPRLTAIIRETNDEYIETSAKMRKNIKKLFS 160
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Frame = +3
Query: 120 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEV-IVDIESLR 269
+KV+++G+SG GKT+L+ F++ F TIG DF K V + D +S+R
Sbjct: 7 VKVVVVGESGAGKTALLTCFLDNTFETDPLTTIGIDFKHKIVQLNDGQSIR 57
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 54.4 bits (125), Expect = 7e-08
Identities = 23/74 (31%), Positives = 46/74 (62%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
+ +++WDTAG ER++++ ++Y A + V+D+T +F++LE + +L + P
Sbjct: 55 IRLELWDTAGMERYRTIYNSYYHSAHGVMCVYDMTNEKSFENLEKY---WLKEIKQHAPP 111
Query: 443 NFPFVILGNKVDLD 484
N +++GNK D+D
Sbjct: 112 NAVLMLVGNKADMD 125
Score = 37.5 bits (83), Expect = 0.009
Identities = 14/51 (27%), Positives = 29/51 (56%)
Frame = +3
Query: 117 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESLR 269
L K++++GD GK+ ++ +F F + +T+G DF K + + + +R
Sbjct: 6 LFKIVVVGDHNCGKSCILLRFAENSFRMDHISTLGVDFKLKTIKLGRDKIR 56
>U66216-1|AAB07465.1| 128|Caenorhabditis elegans RAN/Tc4 protein.
Length = 128
Score = 54.0 bits (124), Expect = 9e-08
Identities = 26/73 (35%), Positives = 41/73 (56%)
Frame = +2
Query: 293 QERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVILGNK 472
QE+F L +Y C +++FDVTA T+K++ +W + R +N P V+ GNK
Sbjct: 2 QEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWHHDL-----ARVCENIPIVLCGNK 56
Query: 473 VDLDNRAVSVKRV 511
VD+ +R V K +
Sbjct: 57 VDVKDRKVKAKTI 69
>U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding
protein protein.
Length = 212
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/73 (34%), Positives = 44/73 (60%)
Frame = +2
Query: 269 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNF 448
++I DTAGQE F ++ + R ++VF VT N+F+ ++ + + +D D+F
Sbjct: 67 LEILDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHE---LICRIKDRDDF 123
Query: 449 PFVILGNKVDLDN 487
P +++GNK DL+N
Sbjct: 124 PIILVGNKADLEN 136
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/63 (38%), Positives = 39/63 (61%)
Frame = +3
Query: 99 SSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESLRCKY 278
++++ +L+++++G GVGK++L QF+ + F Y TI D TK+ VD E L CK
Sbjct: 11 AAQQNAVLRIVVVGGGGVGKSALTIQFIQRYFVQDYDPTI-EDSYTKQCFVD-EDL-CKL 67
Query: 279 GIL 287
IL
Sbjct: 68 EIL 70
>U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog
protein.
Length = 212
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/73 (34%), Positives = 44/73 (60%)
Frame = +2
Query: 269 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNF 448
++I DTAGQE F ++ + R ++VF VT N+F+ ++ + + +D D+F
Sbjct: 67 LEILDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHE---LICRIKDRDDF 123
Query: 449 PFVILGNKVDLDN 487
P +++GNK DL+N
Sbjct: 124 PIILVGNKADLEN 136
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/63 (38%), Positives = 39/63 (61%)
Frame = +3
Query: 99 SSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESLRCKY 278
++++ +L+++++G GVGK++L QF+ + F Y TI D TK+ VD E L CK
Sbjct: 11 AAQQNAVLRIVVVGGGGVGKSALTIQFIQRYFVQDYDPTI-EDSYTKQCFVD-EDL-CKL 67
Query: 279 GIL 287
IL
Sbjct: 68 EIL 70
>CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical
protein C44C11.1b protein.
Length = 168
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/73 (34%), Positives = 44/73 (60%)
Frame = +2
Query: 269 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNF 448
++I DTAGQE F ++ + R ++VF VT N+F+ ++ + + +D D+F
Sbjct: 67 LEILDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHE---LICRIKDRDDF 123
Query: 449 PFVILGNKVDLDN 487
P +++GNK DL+N
Sbjct: 124 PIILVGNKADLEN 136
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/63 (38%), Positives = 39/63 (61%)
Frame = +3
Query: 99 SSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESLRCKY 278
++++ +L+++++G GVGK++L QF+ + F Y TI D TK+ VD E L CK
Sbjct: 11 AAQQNAVLRIVVVGGGGVGKSALTIQFIQRYFVQDYDPTI-EDSYTKQCFVD-EDL-CKL 67
Query: 279 GIL 287
IL
Sbjct: 68 EIL 70
>CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical
protein C44C11.1a protein.
Length = 212
Score = 52.4 bits (120), Expect = 3e-07
Identities = 25/73 (34%), Positives = 44/73 (60%)
Frame = +2
Query: 269 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNF 448
++I DTAGQE F ++ + R ++VF VT N+F+ ++ + + +D D+F
Sbjct: 67 LEILDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKLHE---LICRIKDRDDF 123
Query: 449 PFVILGNKVDLDN 487
P +++GNK DL+N
Sbjct: 124 PIILVGNKADLEN 136
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/63 (38%), Positives = 39/63 (61%)
Frame = +3
Query: 99 SSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESLRCKY 278
++++ +L+++++G GVGK++L QF+ + F Y TI D TK+ VD E L CK
Sbjct: 11 AAQQNAVLRIVVVGGGGVGKSALTIQFIQRYFVQDYDPTI-EDSYTKQCFVD-EDL-CKL 67
Query: 279 GIL 287
IL
Sbjct: 68 EIL 70
>U68253-1|AAB16968.1| 65|Caenorhabditis elegans rab6-like protein.
Length = 65
Score = 52.0 bits (119), Expect = 4e-07
Identities = 21/49 (42%), Positives = 35/49 (71%)
Frame = +3
Query: 123 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESLR 269
K++ LG+ VGKTS++ +F+ F N Y+ATIG DFL+K + ++ ++R
Sbjct: 13 KLVFLGEQSVGKTSIITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIR 61
>U68254-1|AAB16969.1| 67|Caenorhabditis elegans rab6-like protein.
Length = 67
Score = 50.8 bits (116), Expect = 9e-07
Identities = 21/49 (42%), Positives = 35/49 (71%)
Frame = +3
Query: 123 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESLR 269
+++ LG+ VGKTSL+ +F+ F N Y+ATIG DFL+K + ++ ++R
Sbjct: 12 ELVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVR 60
>U68250-1|AAB16965.1| 66|Caenorhabditis elegans rab1-like protein.
Length = 66
Score = 50.4 bits (115), Expect = 1e-06
Identities = 27/56 (48%), Positives = 35/56 (62%)
Frame = +3
Query: 117 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESLRCKYGI 284
L K++I+GDSGVGK+SL+ +F + FS Y TIG DF K +DI R K I
Sbjct: 10 LFKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDF--KIRTMDINGQRVKLQI 63
>Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical
protein F17C8.4 protein.
Length = 211
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/78 (34%), Positives = 42/78 (53%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
V M + DTAGQE F ++ + RG +LVF VT +F+ ++ L +D
Sbjct: 65 VIMDVLDTAGQEEFSAMREQYIRGGRGFLLVFSVTERKSFEEAHKLYNQVL---RVKDRS 121
Query: 443 NFPFVILGNKVDLDNRAV 496
+P +++ NKVDL N+ V
Sbjct: 122 EYPVLLVANKVDLINQRV 139
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +3
Query: 123 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFL 233
K++++GD GVGK+SL QF K+F + Y TI ++
Sbjct: 19 KLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTIEDQYI 55
>U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding
protein protein.
Length = 211
Score = 49.6 bits (113), Expect = 2e-06
Identities = 27/78 (34%), Positives = 42/78 (53%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
V M + DTAGQE F ++ + RG +LVF VT +F+ ++ L +D
Sbjct: 65 VIMDVLDTAGQEEFSAMREQYIRGGRGFLLVFSVTERKSFEEAHKLYNQVL---RVKDRS 121
Query: 443 NFPFVILGNKVDLDNRAV 496
+P +++ NKVDL N+ V
Sbjct: 122 EYPVLLVANKVDLINQRV 139
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/37 (43%), Positives = 25/37 (67%)
Frame = +3
Query: 123 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFL 233
K++++GD GVGK+SL QF K+F + Y TI ++
Sbjct: 19 KLVVIGDGGVGKSSLTIQFFQKQFVDYYDPTIEDQYI 55
>U68264-1|AAB16979.1| 66|Caenorhabditis elegans S10-like protein.
Length = 66
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Frame = +2
Query: 278 WDTAGQERF-QSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPF 454
WDTAGQER+ QS+ +YR + V V+DVT +F L W E D + P
Sbjct: 1 WDTAGQERYRQSIVAHYYRNVNAVVFVYDVTCRESFNDLALWIKECEKHGLVGDSE-VPR 59
Query: 455 VILGNK 472
+++GNK
Sbjct: 60 ILIGNK 65
>Z99281-8|CAB16514.1| 185|Caenorhabditis elegans Hypothetical
protein Y57G11C.13 protein.
Length = 185
Score = 48.0 bits (109), Expect = 6e-06
Identities = 28/73 (38%), Positives = 42/73 (57%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
VT+++WD GQ RF+S+ + RG + +VF V A + K LE+ R+E + D
Sbjct: 65 VTIKLWDIGGQPRFRSMWERYCRGVN--AIVFMVDAADEEK-LEASRNELMQLLDKPQLD 121
Query: 443 NFPFVILGNKVDL 481
P ++LGNK DL
Sbjct: 122 AIPVLVLGNKKDL 134
>U68260-1|AAB16975.1| 69|Caenorhabditis elegans rab19-like
protein.
Length = 69
Score = 48.0 bits (109), Expect = 6e-06
Identities = 20/46 (43%), Positives = 31/46 (67%)
Frame = +3
Query: 117 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
L K++++GD GVGKT ++ +F N F ++ TIG DF K ++VD
Sbjct: 10 LFKIVLVGDMGVGKTCVVQRFRNGTFVDRQGTTIGVDFTMKTLVVD 55
>AB185209-1|BAD30093.1| 185|Caenorhabditis elegans novel small G
protein indispensablefor equal chromosome segregation
protein.
Length = 185
Score = 48.0 bits (109), Expect = 6e-06
Identities = 28/73 (38%), Positives = 42/73 (57%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
VT+++WD GQ RF+S+ + RG + +VF V A + K LE+ R+E + D
Sbjct: 65 VTIKLWDIGGQPRFRSMWERYCRGVN--AIVFMVDAADEEK-LEASRNELMQLLDKPQLD 121
Query: 443 NFPFVILGNKVDL 481
P ++LGNK DL
Sbjct: 122 AIPVLVLGNKKDL 134
>U68251-1|AAB16966.1| 69|Caenorhabditis elegans rab1-like protein.
Length = 69
Score = 47.2 bits (107), Expect = 1e-05
Identities = 19/61 (31%), Positives = 39/61 (63%)
Frame = +3
Query: 87 LCKMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESL 266
+ M+ L K++++GDSGVGK+ L+ +F + ++ Y +TIG DF + + +D +++
Sbjct: 1 MAAMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI 60
Query: 267 R 269
+
Sbjct: 61 K 61
>U68262-1|AAB16977.1| 74|Caenorhabditis elegans RAM1-like protein.
Length = 74
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/55 (40%), Positives = 36/55 (65%)
Frame = +3
Query: 117 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESLRCKYG 281
L+K + GD GVGKTS ++++ + F+ Q+ +T+G DF K+V+ ES R +G
Sbjct: 7 LIKFLAPGDPGVGKTSFLHRYTDNTFTGQFISTVGIDFKEKKVV--YESSRGGFG 59
>U68252-1|AAB16967.1| 66|Caenorhabditis elegans rab2-like protein.
Length = 66
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/51 (41%), Positives = 34/51 (66%)
Frame = +3
Query: 117 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESLR 269
L K II+GD+GVGK+ L+ QF +K+F + TIG +F + V +D + ++
Sbjct: 6 LFKHIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIK 56
>Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical
protein C35C5.4 protein.
Length = 195
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/78 (32%), Positives = 43/78 (55%)
Frame = +2
Query: 260 IVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDP 439
+V + +WDTAGQE + L Y D +L F V +P +F ++ S +++ + P
Sbjct: 54 VVNLGLWDTAGQEDYDRLRPLSYPQTDVFILCFSVVSPVSFDNVAS---KWIPEIRQHCP 110
Query: 440 DNFPFVILGNKVDLDNRA 493
D P +++G K+DL + A
Sbjct: 111 D-APVILVGTKLDLRDEA 127
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 120 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATI 218
+K +++GD VGKT ++ + F QY T+
Sbjct: 8 IKCVVVGDGTVGKTCMLISYTTDSFPVQYVPTV 40
>U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase
protein.
Length = 195
Score = 46.4 bits (105), Expect = 2e-05
Identities = 25/78 (32%), Positives = 43/78 (55%)
Frame = +2
Query: 260 IVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDP 439
+V + +WDTAGQE + L Y D +L F V +P +F ++ S +++ + P
Sbjct: 54 VVNLGLWDTAGQEDYDRLRPLSYPQTDVFILCFSVVSPVSFDNVAS---KWIPEIRQHCP 110
Query: 440 DNFPFVILGNKVDLDNRA 493
D P +++G K+DL + A
Sbjct: 111 D-APVILVGTKLDLRDEA 127
Score = 29.9 bits (64), Expect = 1.8
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 120 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATI 218
+K +++GD VGKT ++ + F QY T+
Sbjct: 8 IKCVVVGDGTVGKTCMLISYTTDSFPVQYVPTV 40
>Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/74 (27%), Positives = 43/74 (58%)
Frame = +2
Query: 269 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNF 448
++I DTAG E+F S+ + + V+V+ +T+ TF + + +++ + + +N
Sbjct: 53 LEILDTAGTEQFSSMRDLYIKNGQGFVVVYSITSQQTFHDIRNMKEQIV---RVKGSENV 109
Query: 449 PFVILGNKVDLDNR 490
P +++GNK DL ++
Sbjct: 110 PILLVGNKCDLSHQ 123
Score = 44.4 bits (100), Expect = 8e-05
Identities = 22/44 (50%), Positives = 29/44 (65%)
Frame = +3
Query: 123 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
KV++LG GVGK++L QFV+ F +Y TI DF KE+ VD
Sbjct: 5 KVVVLGSGGVGKSALTVQFVSSTFIEKYDPTI-EDFYRKEIEVD 47
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 46.0 bits (104), Expect = 3e-05
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Frame = +2
Query: 269 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSL-ESWRDEFLIQASPRDPDN 445
++I DTAG E+F + +YR A VLVF + +TF++L +++ D I+
Sbjct: 53 LEILDTAGTEQFTGMRETYYRTAQGFVLVFSLAETSTFENLKQTFTDIIAIRGK-----E 107
Query: 446 FPFVILGNKVDL-DNRAVSVKRVNNGA 523
P +++GNK DL + R V +N A
Sbjct: 108 VPMILVGNKSDLAETRQVDESEAHNFA 134
Score = 37.9 bits (84), Expect = 0.007
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +3
Query: 123 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESLR 269
K+++LG+ GVGK++L Q+V F + Y ATI D K VD E+ R
Sbjct: 5 KIVVLGNGGVGKSALTLQYVQGIFVHTYDATI-EDSYRKLSKVDAENAR 52
>U68259-1|AAB16974.1| 69|Caenorhabditis elegans rab14-like
protein.
Length = 69
Score = 46.0 bits (104), Expect = 3e-05
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = +3
Query: 117 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESLRCKYGI 284
+ K II+GD GVGK+ L++QF KKF TIG +F T+ I+++ + K I
Sbjct: 11 IFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTR--IIEVSGQKIKLQI 64
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 192
Score = 45.6 bits (103), Expect = 3e-05
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSL-ESWRDEFLIQASPRDP 439
V + +WDTAGQE + L Y D ++ F + +P++ +++ E W E + P
Sbjct: 53 VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPE-VRHFCP--- 108
Query: 440 DNFPFVILGNKVDLDNRAVSVKRV 511
N P +++GNK DL + +V+ +
Sbjct: 109 -NVPIILVGNKRDLRSDPQTVREL 131
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +3
Query: 123 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
K++I+GD GKT L+ F +F + Y T+ +++ ++ VD
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPDVYVPTVFENYVA-DIEVD 49
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 45.6 bits (103), Expect = 3e-05
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSL-ESWRDEFLIQASPRDP 439
V + +WDTAGQE + L Y D ++ F + +P++ +++ E W E + P
Sbjct: 53 VELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPE-VRHFCP--- 108
Query: 440 DNFPFVILGNKVDLDNRAVSVKRV 511
N P +++GNK DL + +V+ +
Sbjct: 109 -NVPIILVGNKRDLRSDPQTVREL 131
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +3
Query: 123 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
K++I+GD GKT L+ F +F + Y T+ +++ ++ VD
Sbjct: 7 KLVIVGDGACGKTCLLIVFSKDQFPDVYVPTVFENYVA-DIEVD 49
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 45.6 bits (103), Expect = 3e-05
Identities = 24/81 (29%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Frame = +2
Query: 266 TMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDN 445
++ I DTAGQE + ++ +YR + + VF + +F++ +R++ L +
Sbjct: 66 SIDILDTAGQEDYSAIRDNYYRSGEGFICVFSILDMESFEATNEFREQIL--RVKNSDSS 123
Query: 446 FPFVILGNKVDL-DNRAVSVK 505
P V++GNK D+ D R VS +
Sbjct: 124 VPIVLVGNKGDMRDQRVVSAE 144
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/61 (37%), Positives = 39/61 (63%)
Frame = +3
Query: 105 RKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIESLRCKYGI 284
+++++ KVI++G GVGK++L QF+ +F +Y+ T AD K+V++D E C I
Sbjct: 13 QQQVVHKVIMVGTGGVGKSALTLQFMYDEFVEEYEPT-KADSYRKKVVLDGE--ECSIDI 69
Query: 285 L 287
L
Sbjct: 70 L 70
>AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical
protein Y11D7A.4 protein.
Length = 248
Score = 44.8 bits (101), Expect = 6e-05
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
V +Q+WD GQ + + GA+ LV+DVT +F++ W +++ + + +
Sbjct: 85 VLVQVWDIGGQSIAGEMIDKYLTGANIVFLVYDVTNSKSFENAVDWLS--VVKKNTKSSE 142
Query: 443 N-FPFVILGNKVDL-DNRAVSVKRVNNGA 523
V++GNK DL + R VSV+ N A
Sbjct: 143 TPVKLVLMGNKTDLEERRVVSVEAHKNFA 171
Score = 44.0 bits (99), Expect = 1e-04
Identities = 15/48 (31%), Positives = 29/48 (60%)
Frame = +3
Query: 117 LLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDIE 260
++K++++GD GKTS+ +F + F Y T+G DF ++ + + E
Sbjct: 35 VIKIVVVGDGASGKTSICQRFAKESFDKSYHQTLGLDFFSRRITLPHE 82
>X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-related
protein protein.
Length = 191
Score = 42.7 bits (96), Expect = 2e-04
Identities = 26/85 (30%), Positives = 44/85 (51%)
Frame = +2
Query: 257 RIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRD 436
R + + +WDTAGQE + L Y D ++ F + P +F E+ R ++ + S
Sbjct: 49 RPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFALNNPASF---ENVRAKWYPEVSHHC 105
Query: 437 PDNFPFVILGNKVDLDNRAVSVKRV 511
P N P +++G K DL +V+R+
Sbjct: 106 P-NTPIILVGTKADLREDRDTVERL 129
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 120 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
+K +++GD VGKT L+ + F +Y T+ D + V+VD
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVD 47
>U68261-1|AAB16976.1| 53|Caenorhabditis elegans rab19-like
protein.
Length = 53
Score = 42.7 bits (96), Expect = 2e-04
Identities = 21/47 (44%), Positives = 29/47 (61%)
Frame = +3
Query: 111 KLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIV 251
K L KV+++ ++GVGKT L+ +F F ATIG DF+ K V V
Sbjct: 5 KYLFKVVLVPNAGVGKTCLVRKFTQGIFPPGQSATIGVDFMIKTVKV 51
>U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical
protein R07G3.1 protein.
Length = 191
Score = 42.7 bits (96), Expect = 2e-04
Identities = 27/103 (26%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Frame = +2
Query: 266 TMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSL-ESWRDEFLIQASPRDPD 442
T+ ++DTAGQE + L Y D ++ F V AP +F+++ E W E S
Sbjct: 52 TLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVAPASFENVREKWVPEISHHCS----- 106
Query: 443 NFPFVILGNKVDLDNRAVSVKRVNNGARARTTSRILRQVPKKL 571
PF+++G +VDL + ++++ + ++ + ++ K+L
Sbjct: 107 KTPFLLVGTQVDLRDDPGMLEKLAKNKQKPVSTDVGEKLAKEL 149
Score = 34.3 bits (75), Expect = 0.082
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 120 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATI 218
+K +++GD VGKT L+ + KF ++Y T+
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV 36
>S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog
protein.
Length = 191
Score = 42.7 bits (96), Expect = 2e-04
Identities = 27/103 (26%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Frame = +2
Query: 266 TMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSL-ESWRDEFLIQASPRDPD 442
T+ ++DTAGQE + L Y D ++ F V AP +F+++ E W E S
Sbjct: 52 TLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVAPASFENVREKWVPEISHHCS----- 106
Query: 443 NFPFVILGNKVDLDNRAVSVKRVNNGARARTTSRILRQVPKKL 571
PF+++G +VDL + ++++ + ++ + ++ K+L
Sbjct: 107 KTPFLLVGTQVDLRDDPGMLEKLAKNKQKPVSTYVGEKLAKEL 149
Score = 34.7 bits (76), Expect = 0.062
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +3
Query: 120 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVI 248
+K +++GD VGKT L+ + KF ++Y T+ ++ +I
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTAMI 46
>L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 188
Score = 42.7 bits (96), Expect = 2e-04
Identities = 27/103 (26%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Frame = +2
Query: 266 TMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSL-ESWRDEFLIQASPRDPD 442
T+ ++DTAGQE + L Y D ++ F V AP +F+++ E W E S
Sbjct: 49 TLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVAPASFENVREKWVPEISHHCS----- 103
Query: 443 NFPFVILGNKVDLDNRAVSVKRVNNGARARTTSRILRQVPKKL 571
PF+++G +VDL + ++++ + ++ + ++ K+L
Sbjct: 104 KTPFLLVGTQVDLRDDPGMLEKLAKNKQKPVSTDVGEKLAKEL 146
Score = 34.3 bits (75), Expect = 0.082
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 120 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATI 218
+K +++GD VGKT L+ + KF ++Y T+
Sbjct: 1 MKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV 33
>L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 42.7 bits (96), Expect = 2e-04
Identities = 26/85 (30%), Positives = 44/85 (51%)
Frame = +2
Query: 257 RIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRD 436
R + + +WDTAGQE + L Y D ++ F + P +F E+ R ++ + S
Sbjct: 49 RPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFALNNPASF---ENVRAKWYPEVSHHC 105
Query: 437 PDNFPFVILGNKVDLDNRAVSVKRV 511
P N P +++G K DL +V+R+
Sbjct: 106 P-NTPIILVGTKADLREDRDTVERL 129
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 120 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
+K +++GD VGKT L+ + F +Y T+ D + V+VD
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVD 47
>L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 42.7 bits (96), Expect = 2e-04
Identities = 26/85 (30%), Positives = 44/85 (51%)
Frame = +2
Query: 257 RIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRD 436
R + + +WDTAGQE + L Y D ++ F + P +F E+ R ++ + S
Sbjct: 49 RPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFALNNPASF---ENVRAKWYPEVSHHC 105
Query: 437 PDNFPFVILGNKVDLDNRAVSVKRV 511
P N P +++G K DL +V+R+
Sbjct: 106 P-NTPIILVGTKADLREDRDTVERL 129
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 120 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
+K +++GD VGKT L+ + F +Y T+ D + V+VD
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVD 47
>AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse
engulfment proteinCED-10 protein.
Length = 191
Score = 42.7 bits (96), Expect = 2e-04
Identities = 26/85 (30%), Positives = 44/85 (51%)
Frame = +2
Query: 257 RIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRD 436
R + + +WDTAGQE + L Y D ++ F + P +F E+ R ++ + S
Sbjct: 49 RPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFALNNPASF---ENVRAKWYPEVSHHC 105
Query: 437 PDNFPFVILGNKVDLDNRAVSVKRV 511
P N P +++G K DL +V+R+
Sbjct: 106 P-NTPIILVGTKADLREDRDTVERL 129
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 120 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
+K +++GD VGKT L+ + F +Y T+ D + V+VD
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVD 47
>AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death
abnormality protein10, isoform b protein.
Length = 191
Score = 42.7 bits (96), Expect = 2e-04
Identities = 26/85 (30%), Positives = 44/85 (51%)
Frame = +2
Query: 257 RIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRD 436
R + + +WDTAGQE + L Y D ++ F + P +F E+ R ++ + S
Sbjct: 49 RPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFALNNPASF---ENVRAKWYPEVSHHC 105
Query: 437 PDNFPFVILGNKVDLDNRAVSVKRV 511
P N P +++G K DL +V+R+
Sbjct: 106 P-NTPIILVGTKADLREDRDTVERL 129
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 120 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
+K +++GD VGKT L+ + F +Y T+ D + V+VD
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVD 47
>U68263-1|AAB16978.1| 115|Caenorhabditis elegans rab-like protein.
Length = 115
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/52 (42%), Positives = 31/52 (59%)
Frame = +3
Query: 99 SSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
S+ K KV++LGDSGVGKTS++ + ATIGA F++ +V D
Sbjct: 46 STAPKHKAKVVVLGDSGVGKTSIIYRHRYGAHYRPVNATIGASFVSFDVGAD 97
>Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical
protein K03D3.10 protein.
Length = 195
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/85 (25%), Positives = 43/85 (50%)
Frame = +2
Query: 257 RIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRD 436
R + + +WDTAGQ+ + + D ++ F + P +F E+ R ++ + S
Sbjct: 49 RPINLSLWDTAGQDDYDQFRHLSFPQTDVFLVCFALNNPASF---ENVRAKWYPEVSHHC 105
Query: 437 PDNFPFVILGNKVDLDNRAVSVKRV 511
P N P +++G K DL +++R+
Sbjct: 106 P-NTPIILVGTKADLREDRDTIERL 129
Score = 33.1 bits (72), Expect = 0.19
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 120 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
+K +++GD VGKT L+ + F +Y T+ D + V+VD
Sbjct: 4 IKCVVVGDGAVGKTCLLLSYTTNAFPGEYILTV-FDTYSTNVMVD 47
>U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein.
Length = 195
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/85 (25%), Positives = 43/85 (50%)
Frame = +2
Query: 257 RIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRD 436
R + + +WDTAGQ+ + + D ++ F + P +F E+ R ++ + S
Sbjct: 49 RPINLSLWDTAGQDDYDQFRHLSFPQTDVFLVCFALNNPASF---ENVRAKWYPEVSHHC 105
Query: 437 PDNFPFVILGNKVDLDNRAVSVKRV 511
P N P +++G K DL +++R+
Sbjct: 106 P-NTPIILVGTKADLREDRDTIERL 129
Score = 33.1 bits (72), Expect = 0.19
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 120 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
+K +++GD VGKT L+ + F +Y T+ D + V+VD
Sbjct: 4 IKCVVVGDGAVGKTCLLLSYTTNAFPGEYILTV-FDTYSTNVMVD 47
>AC024812-5|AAF59556.1| 191|Caenorhabditis elegans Hypothetical
protein Y54E10BR.2 protein.
Length = 191
Score = 36.7 bits (81), Expect = 0.015
Identities = 19/79 (24%), Positives = 35/79 (44%)
Frame = +2
Query: 269 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNF 448
+ WD GQE + L +Y A+ + V D T + F + S E + + N
Sbjct: 71 LHFWDLGGQESLRELWATYYDDANAMIFVVDATRSDLFPIVASQFKEVMANEIVQ---NI 127
Query: 449 PFVILGNKVDLDNRAVSVK 505
P ++ NK +++ A + +
Sbjct: 128 PVLVAVNKSEMEGAAAAAE 146
>AL021475-2|CAA16313.1| 187|Caenorhabditis elegans Hypothetical
protein Y32F6B.3 protein.
Length = 187
Score = 36.3 bits (80), Expect = 0.020
Identities = 25/93 (26%), Positives = 43/93 (46%)
Frame = +2
Query: 269 MQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNF 448
+ ++DTAGQ ++ + Y A+ ++ F + K+LES R ++ + DN
Sbjct: 54 VNLFDTAGQGNYEQIRCLSYPHANVFLVCFSMIDR---KTLESCRSTWIPEIRKYAGDNV 110
Query: 449 PFVILGNKVDLDNRAVSVKRVNNGARARTTSRI 547
P +++G K DL + A S V R I
Sbjct: 111 PIMLVGTKNDLVDDADSRNTVTEDYAKRVAHEI 143
Score = 35.1 bits (77), Expect = 0.047
Identities = 13/33 (39%), Positives = 23/33 (69%)
Frame = +3
Query: 120 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATI 218
LK++++GD+ GKTSL+ + K+F + Y T+
Sbjct: 5 LKLVVVGDTYTGKTSLLVAYTKKQFLDNYTTTV 37
>U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific
family, class rprotein 2 protein.
Length = 332
Score = 35.5 bits (78), Expect = 0.036
Identities = 12/32 (37%), Positives = 26/32 (81%)
Frame = +3
Query: 123 KVIILGDSGVGKTSLMNQFVNKKFSNQYKATI 218
++++LG + VGKT+++ +++ +FS++YK TI
Sbjct: 19 RLVVLGSAKVGKTNIIRRYLYNEFSSKYKETI 50
>U70852-7|AAK29813.1| 179|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.1 protein.
Length = 179
Score = 34.3 bits (75), Expect = 0.082
Identities = 19/75 (25%), Positives = 39/75 (52%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPD 442
+T+ +WD GQ++ ++L ++ + LVF V + + + E+ + F + A P D
Sbjct: 61 ITLTVWDVGGQKKIRALWKYYF--PNTTTLVFVVDSSDIERIPEAKEELFSLLAEPELAD 118
Query: 443 NFPFVILGNKVDLDN 487
+ ++ NK D+ N
Sbjct: 119 SH-LLVFANKQDMPN 132
>U23938-1|AAA65452.1| 35|Caenorhabditis elegans pra-1 protein.
Length = 35
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +3
Query: 129 IILGDSGVGKTSLMNQFVNKKFSNQYKATIGADF 230
+I+G+SGVGK+SLM +FV+ + +IG F
Sbjct: 1 LIIGESGVGKSSLMLRFVDDVVDPERAVSIGVPF 34
>AL032654-6|CAB54465.1| 467|Caenorhabditis elegans Hypothetical
protein Y52B11A.4 protein.
Length = 467
Score = 33.1 bits (72), Expect = 0.19
Identities = 10/28 (35%), Positives = 21/28 (75%)
Frame = +3
Query: 123 KVIILGDSGVGKTSLMNQFVNKKFSNQY 206
K+ ++GD+G GK+SL++Q + ++ N +
Sbjct: 239 KIYVVGDTGTGKSSLISQLITSEYKNAF 266
Score = 28.3 bits (60), Expect = 5.4
Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = +2
Query: 386 SLESWRDEFLIQASPRDPD---NFPFVILGNKVDLDNRAVSVKRVNNGARA 529
S SW+ + RD N P ++ GNK+DL+ + K+ A+A
Sbjct: 316 SKSSWKQAMVALEMIRDRPGTRNLPTLVAGNKIDLERKRTVTKQEVRAAKA 366
>AF038608-15|AAC25820.1| 129|Caenorhabditis elegans Cell death
abnormality protein10, isoform a protein.
Length = 129
Score = 32.7 bits (71), Expect = 0.25
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +3
Query: 120 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVD 254
+K +++GD VGKT L+ + F +Y T+ D + V+VD
Sbjct: 4 IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTV-FDNYSANVMVD 47
>Z50044-1|CAA90353.2| 184|Caenorhabditis elegans Hypothetical
protein F22B5.1 protein.
Length = 184
Score = 32.3 bits (70), Expect = 0.33
Identities = 17/52 (32%), Positives = 34/52 (65%)
Frame = +3
Query: 81 KLLCKMSSRKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLT 236
K+L K +R++ + +++ILG GKT+LM +F+++ ++ + T+G D T
Sbjct: 5 KILRKQRAREREM-RILILGLDNAGKTTLMKKFLDEP-TDTIEPTLGFDIKT 54
>AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical
protein Y116A8C.10b protein.
Length = 248
Score = 32.3 bits (70), Expect = 0.33
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +2
Query: 257 RIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESW 400
R +++WD G + F+ GA +LV D+T + ++L +W
Sbjct: 64 RTELLELWDIGGMVAHRQAAQVFFEGAVGAILVHDLTNKRSEENLATW 111
Score = 29.9 bits (64), Expect = 1.8
Identities = 14/24 (58%), Positives = 18/24 (75%)
Frame = +3
Query: 96 MSSRKKLLLKVIILGDSGVGKTSL 167
MSS + K+++LGDS VGKTSL
Sbjct: 1 MSSLDESSTKILVLGDSCVGKTSL 24
>Z66561-1|CAA91454.1| 635|Caenorhabditis elegans Hypothetical
protein F08G12.1 protein.
Length = 635
Score = 31.9 bits (69), Expect = 0.44
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +3
Query: 120 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKAT 215
LK++I GD VGKT L + F +Y AT
Sbjct: 44 LKIVIRGDRNVGKTCLWKRLQGLSFQEEYVAT 75
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/67 (28%), Positives = 34/67 (50%)
Frame = +2
Query: 281 DTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVI 460
DTA RF V Y+G + + VFD+T ++W E++ + + P+ P ++
Sbjct: 132 DTACDARF----VDVYKGTNGVIFVFDIT--------KTWTWEYVQKEIVKVPNKIPVLV 179
Query: 461 LGNKVDL 481
L N+ D+
Sbjct: 180 LANRRDM 186
>AC024853-3|ABP57809.1| 244|Caenorhabditis elegans Hypothetical
protein Y71F9AR.2 protein.
Length = 244
Score = 31.9 bits (69), Expect = 0.44
Identities = 11/43 (25%), Positives = 28/43 (65%)
Frame = +3
Query: 120 LKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVI 248
L V ++G +G GK+++ +++ K+F +Y +T+ ++ +E +
Sbjct: 10 LHVALVGMAGSGKSAIAVKYITKRFIGEYDSTLEDNYCRQETV 52
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 31.5 bits (68), Expect = 0.58
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +3
Query: 105 RKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATI 218
R++ + V +LG VGK+++++QF+ KF Y+ T+
Sbjct: 18 RRQNKVTVAVLGAERVGKSAMVSQFLWHKFVEDYRPTV 55
>AY519855-1|AAR89636.1| 180|Caenorhabditis elegans ADP-ribosylation
factor related(20.5 kD) (arf-3) protein.
Length = 180
Score = 31.1 bits (67), Expect = 0.77
Identities = 16/78 (20%), Positives = 36/78 (46%)
Frame = +2
Query: 254 HRIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPR 433
++ ++ +WD GQ++ + L +++ + V D N + +E R+E +
Sbjct: 58 YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD---SNDKERIEESREELHKMLNED 114
Query: 434 DPDNFPFVILGNKVDLDN 487
+ + ++ NK DL N
Sbjct: 115 ELRDATLLVFANKQDLPN 132
>AF045644-6|AAC02598.1| 180|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 3 protein.
Length = 180
Score = 31.1 bits (67), Expect = 0.77
Identities = 16/78 (20%), Positives = 36/78 (46%)
Frame = +2
Query: 254 HRIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPR 433
++ ++ +WD GQ++ + L +++ + V D N + +E R+E +
Sbjct: 58 YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD---SNDKERIEESREELHKMLNED 114
Query: 434 DPDNFPFVILGNKVDLDN 487
+ + ++ NK DL N
Sbjct: 115 ELRDATLLVFANKQDLPN 132
>Z83129-6|CAB63324.1| 101|Caenorhabditis elegans Hypothetical
protein W06G6.10 protein.
Length = 101
Score = 30.3 bits (65), Expect = 1.3
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = +1
Query: 52 IILYFSSLCKNCCAKCLHG 108
++ +F+ LC NCCA C+ G
Sbjct: 79 VLRFFAELCCNCCAGCVQG 97
>Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical
protein F54C8.5 protein.
Length = 207
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/81 (23%), Positives = 38/81 (46%)
Frame = +2
Query: 254 HRIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPR 433
HR +++ DTAGQ+ + + + +LV+ + +F+ + ++ +
Sbjct: 58 HRDYHLRVTDTAGQQEYTVFPRSCSLDINGFILVYAIDDRKSFEMCSNIYEKIV---RTY 114
Query: 434 DPDNFPFVILGNKVDLDNRAV 496
+ P VI+GNK DL + V
Sbjct: 115 GDTSIPIVIVGNKTDLSTQRV 135
>U13645-7|AAA20989.2| 598|Caenorhabditis elegans Hypothetical
protein C05D10.3 protein.
Length = 598
Score = 29.9 bits (64), Expect = 1.8
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 132 ILGDSGVGKTSLMNQFVNKKFSN 200
ILG SG GKT+LMN ++ +N
Sbjct: 25 ILGSSGAGKTTLMNVLTSRNLTN 47
>Z82272-8|CAB05223.1| 337|Caenorhabditis elegans Hypothetical
protein F55G11.1 protein.
Length = 337
Score = 29.5 bits (63), Expect = 2.3
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Frame = +3
Query: 57 IVFFIIV*KLLCKMSSRKKLLLKVIILGDS-------GVGKTSLMNQFVNKKFSNQYKAT 215
++FFII+ K L SSR + + +V+ +G + G S+++ F+ + QY
Sbjct: 116 LMFFIILEKFLWTCSSRTRQIFRVVTIGKNKYWLALIGCIGYSVLSAFIQSRSLLQYGEV 175
Query: 216 IGADFLTKEVIVDIESLR 269
D L + V D LR
Sbjct: 176 PFCDLLFRPVGADTPFLR 193
>Z82260-13|CAB05143.1| 337|Caenorhabditis elegans Hypothetical
protein F55G11.1 protein.
Length = 337
Score = 29.5 bits (63), Expect = 2.3
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Frame = +3
Query: 57 IVFFIIV*KLLCKMSSRKKLLLKVIILGDS-------GVGKTSLMNQFVNKKFSNQYKAT 215
++FFII+ K L SSR + + +V+ +G + G S+++ F+ + QY
Sbjct: 116 LMFFIILEKFLWTCSSRTRQIFRVVTIGKNKYWLALIGCIGYSVLSAFIQSRSLLQYGEV 175
Query: 216 IGADFLTKEVIVDIESLR 269
D L + V D LR
Sbjct: 176 PFCDLLFRPVGADTPFLR 193
>Z83114-1|CAB63234.1| 549|Caenorhabditis elegans Hypothetical
protein K09B11.2 protein.
Length = 549
Score = 29.1 bits (62), Expect = 3.1
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +3
Query: 126 VIILGDSGVGKTSLMNQFVNKKFSNQYK 209
++ +G G GK++LM VN+ SN Y+
Sbjct: 186 ILPIGHKGAGKSNLMRSLVNRCLSNGYE 213
>AL117204-5|CAB55153.1| 175|Caenorhabditis elegans Hypothetical
protein Y116A8C.12 protein.
Length = 175
Score = 29.1 bits (62), Expect = 3.1
Identities = 9/36 (25%), Positives = 18/36 (50%)
Frame = +2
Query: 254 HRIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFD 361
++ + +WD GQ++ + L +Y G + V D
Sbjct: 54 YKNIKFNVWDVGGQDKIRPLWRHYYTGTQALIFVMD 89
>AC006762-5|AAF60553.2| 684|Caenorhabditis elegans Hypothetical
protein Y42G9A.6a protein.
Length = 684
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 132 ILGDSGVGKTSLMNQFVNKKFSNQYKAT 215
I+G SG GKT+L+N + SN KAT
Sbjct: 97 IIGPSGAGKTTLLNVLTKRNLSN-LKAT 123
>Z50071-4|CAA90409.2| 1301|Caenorhabditis elegans Hypothetical
protein T07D4.3 protein.
Length = 1301
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
Frame = -2
Query: 199 LENFLLTN*F--IRDVFPTP-LSPRIITFS-RSFFREDILHN 86
++ L TN F I DV PTP ++ TF +SF+ EDILHN
Sbjct: 539 IDTDLFTNFFSSIPDVGPTPVITMHGRTFPVQSFYLEDILHN 580
>Z49912-5|CAA90136.1| 312|Caenorhabditis elegans Hypothetical
protein T24F1.1 protein.
Length = 312
Score = 28.3 bits (60), Expect = 5.4
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 7/89 (7%)
Frame = +2
Query: 263 VTMQIWDTAGQERFQ-----SLGVAFYRGADCCVLVFDVTAPNTFKSLESWRD--EFLIQ 421
+ + +WD GQE F S ++ + VFDV + K L ++ E L+Q
Sbjct: 53 MVLHLWDCGGQESFMENFLVSQKDQIFKNVQVLIYVFDVESREFEKDLRYYQSCLEALLQ 112
Query: 422 ASPRDPDNFPFVILGNKVDLDNRAVSVKR 508
SP + F + + ++ D R + KR
Sbjct: 113 NSP-NAQVFCLIHKMDLIEEDKREETFKR 140
>U40933-1|AAA81672.1| 699|Caenorhabditis elegans Bbs (bardet-biedl
syndrome) proteinprotein 2 protein.
Length = 699
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +2
Query: 311 LGVAFYRGADCCVLVFDVTAPNTF 382
L A Y G +CC+ FD T NT+
Sbjct: 136 LDEAIYCGGNCCIWGFDKTGANTY 159
>AF067949-8|AAX88812.1| 565|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 5, isoform c protein.
Length = 565
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +3
Query: 126 VIILGDSGVGKTSLM 170
++I GDSG+GKTSLM
Sbjct: 410 LLITGDSGIGKTSLM 424
>AF067949-7|AAO25995.2| 626|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 5, isoform b protein.
Length = 626
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +3
Query: 126 VIILGDSGVGKTSLM 170
++I GDSG+GKTSLM
Sbjct: 438 LLITGDSGIGKTSLM 452
>AF067949-6|AAC19238.1| 598|Caenorhabditis elegans Peroxisomal
membrane protein relatedprotein 5, isoform a protein.
Length = 598
Score = 28.3 bits (60), Expect = 5.4
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +3
Query: 126 VIILGDSGVGKTSLM 170
++I GDSG+GKTSLM
Sbjct: 410 LLITGDSGIGKTSLM 424
>Z29117-5|CAC42271.1| 1704|Caenorhabditis elegans Hypothetical protein
C48B4.4c protein.
Length = 1704
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 132 ILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIV 251
+LG +G GKT+ N + F++ +A IG +T+ + +
Sbjct: 1409 LLGVNGAGKTTTFNILTGQSFASSGEAMIGGRDVTELISI 1448
>Z29117-4|CAA82384.2| 1691|Caenorhabditis elegans Hypothetical protein
C48B4.4b protein.
Length = 1691
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 132 ILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIV 251
+LG +G GKT+ N + F++ +A IG +T+ + +
Sbjct: 1396 LLGVNGAGKTTTFNILTGQSFASSGEAMIGGRDVTELISI 1435
>Z29117-3|CAA82383.2| 1689|Caenorhabditis elegans Hypothetical protein
C48B4.4a protein.
Length = 1689
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 132 ILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIV 251
+LG +G GKT+ N + F++ +A IG +T+ + +
Sbjct: 1394 LLGVNGAGKTTTFNILTGQSFASSGEAMIGGRDVTELISI 1433
>U32305-19|AAK18851.1| 181|Caenorhabditis elegans Adp-ribosylation
factor relatedprotein 1.2 protein.
Length = 181
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/76 (18%), Positives = 35/76 (46%)
Frame = +2
Query: 254 HRIVTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPR 433
++ ++ +WD GQ++ + L +++ + V D N + + R+E + +
Sbjct: 58 YKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVD---SNDRERVGEAREELMRMLAED 114
Query: 434 DPDNFPFVILGNKVDL 481
+ + ++ NK DL
Sbjct: 115 ELRDAVLLVFANKQDL 130
>AF049142-1|AAC24116.1| 1704|Caenorhabditis elegans ATP-binding
cassette transporter protein.
Length = 1704
Score = 27.5 bits (58), Expect = 9.4
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +3
Query: 132 ILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIV 251
+LG +G GKT+ N + F++ +A IG +T+ + +
Sbjct: 1409 LLGVNGAGKTTTFNILTGQSFASSGEAMIGGRDVTELISI 1448
>AF039046-14|AAB94214.1| 388|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 54
protein.
Length = 388
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = +1
Query: 499 CQT-CQQWCQSKNDIPYFETSAKEAVNVELAFQ 594
CQ CQQ C D P T A + V+++L Q
Sbjct: 154 CQPQCQQQCNVACDAPATSTQAPQVVHIQLEIQ 186
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,406,004
Number of Sequences: 27780
Number of extensions: 360596
Number of successful extensions: 1319
Number of sequences better than 10.0: 118
Number of HSP's better than 10.0 without gapping: 1121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1293
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1560745544
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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