Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00631
         (773 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   2.1  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   2.1  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    23   2.7  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    23   3.6  
AY600515-1|AAT11863.1|  134|Tribolium castaneum optomotor-blind-...    23   3.6  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 238 KDPCNGYTAIRIGYY 282
           KDPC+ YTAI   +Y
Sbjct: 11  KDPCDVYTAIHPLFY 25


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 238 KDPCNGYTAIRIGYY 282
           KDPC+ YTAI   +Y
Sbjct: 11  KDPCDVYTAIHPLFY 25


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +3

Query: 12  YLRGRTAAPRIFLFQLSRVKRKIQYYSAYNASSWGLLWLE*GVC 143
           YLR    + R+F +QL+ + +KI+      +    LLW E   C
Sbjct: 268 YLRFGCLSTRLFYYQLTDLYKKIKKAFPPLSLHGQLLWREFFYC 311


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +3

Query: 477 ECVSEGDQEIRFDFSAWPVTFTADPEERQESWLQNHP 587
           + V+  D   +F  S W V   ADPE  +  ++  HP
Sbjct: 24  DIVAADDCRYKFHNSRWMVAGKADPEMPKRMYI--HP 58


>AY600515-1|AAT11863.1|  134|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 134

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +3

Query: 477 ECVSEGDQEIRFDFSAWPVTFTADPEERQESWLQNHP 587
           + V+  D   +F  S W V   ADPE  +  ++  HP
Sbjct: 24  DIVAADDCRYKFHNSRWMVAGKADPEMPKRMYI--HP 58


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,044
Number of Sequences: 336
Number of extensions: 4165
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)