Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00631
(773 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX511262-2|CAM45793.1| 601|Homo sapiens HLA-B associated transc... 42 0.003
BX248244-2|CAM26084.1| 601|Homo sapiens HLA-B associated transc... 42 0.003
BC031839-1|AAH31839.1| 558|Homo sapiens HLA-B associated transc... 42 0.003
BA000025-23|BAB63383.1| 558|Homo sapiens BAT5 protein. 42 0.003
AL805934-43|CAI18530.1| 558|Homo sapiens HLA-B associated trans... 42 0.003
AL670886-34|CAI17808.2| 601|Homo sapiens HLA-B associated trans... 42 0.003
AL662899-18|CAI18401.2| 601|Homo sapiens HLA-B associated trans... 42 0.003
AK023194-1|BAB14455.1| 558|Homo sapiens protein ( Homo sapiens ... 42 0.003
AF193047-1|AAG22475.1| 558|Homo sapiens unknown protein. 42 0.003
AF129756-9|AAD18079.1| 558|Homo sapiens BAT5 protein. 42 0.003
BX248244-1|CAM26083.1| 264|Homo sapiens HLA-B associated transc... 40 0.008
AL805934-42|CAO03670.1| 264|Homo sapiens HLA-B associated trans... 40 0.008
AL670886-33|CAM25029.1| 264|Homo sapiens HLA-B associated trans... 40 0.008
AL662899-17|CAM25666.1| 264|Homo sapiens HLA-B associated trans... 40 0.008
AK001207-1|BAA91553.1| 339|Homo sapiens protein ( Homo sapiens ... 31 3.5
>BX511262-2|CAM45793.1| 601|Homo sapiens HLA-B associated
transcript 5 protein.
Length = 601
Score = 41.5 bits (93), Expect = 0.003
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +1
Query: 271 IGYYATPLICLYIIQRGFLSMEEVKTLMRFFGGIGCIATVFFVMRAYGRSYSPKYLKFID 450
I YY++P Y+ ++G+LS+ +V + G + + +R GR +P+Y +FI
Sbjct: 113 ISYYSSPFAFFYLYRKGYLSLSKVVPFSHYAGTLLLLLAGVACLRGIGRWTNPQYRQFIT 172
Query: 451 TLDS 462
L++
Sbjct: 173 ILEA 176
Score = 40.3 bits (90), Expect = 0.008
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2
Query: 650 FYCGHTFGIRLIYPGSLFLIHNLLWSGLLSGRTQLVEYTTG 772
+ HT G R++YPGS++L+ L LL G+ +LVE G
Sbjct: 253 YLVAHTLGRRMLYPGSVYLLQKALMPVLLQGQARLVEECNG 293
>BX248244-2|CAM26084.1| 601|Homo sapiens HLA-B associated
transcript 5 protein.
Length = 601
Score = 41.5 bits (93), Expect = 0.003
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +1
Query: 271 IGYYATPLICLYIIQRGFLSMEEVKTLMRFFGGIGCIATVFFVMRAYGRSYSPKYLKFID 450
I YY++P Y+ ++G+LS+ +V + G + + +R GR +P+Y +FI
Sbjct: 113 ISYYSSPFAFFYLYRKGYLSLSKVVPFSHYAGTLLLLLAGVACLRGIGRWTNPQYRQFIT 172
Query: 451 TLDS 462
L++
Sbjct: 173 ILEA 176
Score = 40.3 bits (90), Expect = 0.008
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2
Query: 650 FYCGHTFGIRLIYPGSLFLIHNLLWSGLLSGRTQLVEYTTG 772
+ HT G R++YPGS++L+ L LL G+ +LVE G
Sbjct: 253 YLVAHTLGRRMLYPGSVYLLQKALMPVLLQGQARLVEECNG 293
>BC031839-1|AAH31839.1| 558|Homo sapiens HLA-B associated
transcript 5 protein.
Length = 558
Score = 41.5 bits (93), Expect = 0.003
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +1
Query: 271 IGYYATPLICLYIIQRGFLSMEEVKTLMRFFGGIGCIATVFFVMRAYGRSYSPKYLKFID 450
I YY++P Y+ ++G+LS+ +V + G + + +R GR +P+Y +FI
Sbjct: 70 ISYYSSPFAFFYLYRKGYLSLSKVVPFSHYAGTLLLLLAGVACLRGIGRWTNPQYRQFIT 129
Query: 451 TLDS 462
L++
Sbjct: 130 ILEA 133
Score = 40.3 bits (90), Expect = 0.008
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2
Query: 650 FYCGHTFGIRLIYPGSLFLIHNLLWSGLLSGRTQLVEYTTG 772
+ HT G R++YPGS++L+ L LL G+ +LVE G
Sbjct: 210 YLVAHTLGRRMLYPGSVYLLQKALMPVLLQGQARLVEECNG 250
>BA000025-23|BAB63383.1| 558|Homo sapiens BAT5 protein.
Length = 558
Score = 41.5 bits (93), Expect = 0.003
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +1
Query: 271 IGYYATPLICLYIIQRGFLSMEEVKTLMRFFGGIGCIATVFFVMRAYGRSYSPKYLKFID 450
I YY++P Y+ ++G+LS+ +V + G + + +R GR +P+Y +FI
Sbjct: 70 ISYYSSPFAFFYLYRKGYLSLSKVVPFSHYAGTLLLLLAGVACLRGIGRWTNPQYRQFIT 129
Query: 451 TLDS 462
L++
Sbjct: 130 ILEA 133
Score = 40.3 bits (90), Expect = 0.008
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2
Query: 650 FYCGHTFGIRLIYPGSLFLIHNLLWSGLLSGRTQLVEYTTG 772
+ HT G R++YPGS++L+ L LL G+ +LVE G
Sbjct: 210 YLVAHTLGRRMLYPGSVYLLQKALMPVLLQGQARLVEECNG 250
>AL805934-43|CAI18530.1| 558|Homo sapiens HLA-B associated
transcript 5 protein.
Length = 558
Score = 41.5 bits (93), Expect = 0.003
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +1
Query: 271 IGYYATPLICLYIIQRGFLSMEEVKTLMRFFGGIGCIATVFFVMRAYGRSYSPKYLKFID 450
I YY++P Y+ ++G+LS+ +V + G + + +R GR +P+Y +FI
Sbjct: 70 ISYYSSPFAFFYLYRKGYLSLSKVVPFSHYAGTLLLLLAGVACLRGIGRWTNPQYRQFIT 129
Query: 451 TLDS 462
L++
Sbjct: 130 ILEA 133
Score = 40.3 bits (90), Expect = 0.008
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2
Query: 650 FYCGHTFGIRLIYPGSLFLIHNLLWSGLLSGRTQLVEYTTG 772
+ HT G R++YPGS++L+ L LL G+ +LVE G
Sbjct: 210 YLVAHTLGRRMLYPGSVYLLQKALMPVLLQGQARLVEECNG 250
>AL670886-34|CAI17808.2| 601|Homo sapiens HLA-B associated
transcript 5 protein.
Length = 601
Score = 41.5 bits (93), Expect = 0.003
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +1
Query: 271 IGYYATPLICLYIIQRGFLSMEEVKTLMRFFGGIGCIATVFFVMRAYGRSYSPKYLKFID 450
I YY++P Y+ ++G+LS+ +V + G + + +R GR +P+Y +FI
Sbjct: 113 ISYYSSPFAFFYLYRKGYLSLSKVVPFSHYAGTLLLLLAGVACLRGIGRWTNPQYRQFIT 172
Query: 451 TLDS 462
L++
Sbjct: 173 ILEA 176
Score = 40.3 bits (90), Expect = 0.008
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2
Query: 650 FYCGHTFGIRLIYPGSLFLIHNLLWSGLLSGRTQLVEYTTG 772
+ HT G R++YPGS++L+ L LL G+ +LVE G
Sbjct: 253 YLVAHTLGRRMLYPGSVYLLQKALMPVLLQGQARLVEECNG 293
>AL662899-18|CAI18401.2| 601|Homo sapiens HLA-B associated
transcript 5 protein.
Length = 601
Score = 41.5 bits (93), Expect = 0.003
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +1
Query: 271 IGYYATPLICLYIIQRGFLSMEEVKTLMRFFGGIGCIATVFFVMRAYGRSYSPKYLKFID 450
I YY++P Y+ ++G+LS+ +V + G + + +R GR +P+Y +FI
Sbjct: 113 ISYYSSPFAFFYLYRKGYLSLSKVVPFSHYAGTLLLLLAGVACLRGIGRWTNPQYRQFIT 172
Query: 451 TLDS 462
L++
Sbjct: 173 ILEA 176
Score = 40.3 bits (90), Expect = 0.008
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2
Query: 650 FYCGHTFGIRLIYPGSLFLIHNLLWSGLLSGRTQLVEYTTG 772
+ HT G R++YPGS++L+ L LL G+ +LVE G
Sbjct: 253 YLVAHTLGRRMLYPGSVYLLQKALMPVLLQGQARLVEECNG 293
>AK023194-1|BAB14455.1| 558|Homo sapiens protein ( Homo sapiens
cDNA FLJ13132 fis, clone NT2RP3003008. ).
Length = 558
Score = 41.5 bits (93), Expect = 0.003
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +1
Query: 271 IGYYATPLICLYIIQRGFLSMEEVKTLMRFFGGIGCIATVFFVMRAYGRSYSPKYLKFID 450
I YY++P Y+ ++G+LS+ +V + G + + +R GR +P+Y +FI
Sbjct: 70 ISYYSSPFAFFYLYRKGYLSLSKVVPFSHYAGTLLLLLAGVACLRGIGRWTNPQYRQFIT 129
Query: 451 TLDS 462
L++
Sbjct: 130 ILEA 133
Score = 40.3 bits (90), Expect = 0.008
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2
Query: 650 FYCGHTFGIRLIYPGSLFLIHNLLWSGLLSGRTQLVEYTTG 772
+ HT G R++YPGS++L+ L LL G+ +LVE G
Sbjct: 210 YLVAHTLGRRMLYPGSVYLLQKALMPVLLQGQARLVEECNG 250
>AF193047-1|AAG22475.1| 558|Homo sapiens unknown protein.
Length = 558
Score = 41.5 bits (93), Expect = 0.003
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +1
Query: 271 IGYYATPLICLYIIQRGFLSMEEVKTLMRFFGGIGCIATVFFVMRAYGRSYSPKYLKFID 450
I YY++P Y+ ++G+LS+ +V + G + + +R GR +P+Y +FI
Sbjct: 70 ISYYSSPFAFFYLYRKGYLSLSKVVPFSHYAGTLLLLLAGVACLRGIGRWTNPQYRQFIT 129
Query: 451 TLDS 462
L++
Sbjct: 130 ILEA 133
Score = 40.3 bits (90), Expect = 0.008
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2
Query: 650 FYCGHTFGIRLIYPGSLFLIHNLLWSGLLSGRTQLVEYTTG 772
+ HT G R++YPGS++L+ L LL G+ +LVE G
Sbjct: 210 YLVAHTLGRRMLYPGSVYLLQKALMPVLLQGQARLVEECNG 250
>AF129756-9|AAD18079.1| 558|Homo sapiens BAT5 protein.
Length = 558
Score = 41.5 bits (93), Expect = 0.003
Identities = 18/64 (28%), Positives = 35/64 (54%)
Frame = +1
Query: 271 IGYYATPLICLYIIQRGFLSMEEVKTLMRFFGGIGCIATVFFVMRAYGRSYSPKYLKFID 450
I YY++P Y+ ++G+LS+ +V + G + + +R GR +P+Y +FI
Sbjct: 70 ISYYSSPFAFFYLYRKGYLSLSKVVPFSHYAGTLLLLLAGVACLRGIGRWTNPQYRQFIT 129
Query: 451 TLDS 462
L++
Sbjct: 130 ILEA 133
Score = 40.3 bits (90), Expect = 0.008
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2
Query: 650 FYCGHTFGIRLIYPGSLFLIHNLLWSGLLSGRTQLVEYTTG 772
+ HT G R++YPGS++L+ L LL G+ +LVE G
Sbjct: 210 YLVAHTLGRRMLYPGSVYLLQKALMPVLLQGQARLVEECNG 250
>BX248244-1|CAM26083.1| 264|Homo sapiens HLA-B associated
transcript 5 protein.
Length = 264
Score = 40.3 bits (90), Expect = 0.008
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2
Query: 650 FYCGHTFGIRLIYPGSLFLIHNLLWSGLLSGRTQLVEYTTG 772
+ HT G R++YPGS++L+ L LL G+ +LVE G
Sbjct: 177 YLVAHTLGRRMLYPGSVYLLQKALMPVLLQGQARLVEECNG 217
>AL805934-42|CAO03670.1| 264|Homo sapiens HLA-B associated
transcript 5 protein.
Length = 264
Score = 40.3 bits (90), Expect = 0.008
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2
Query: 650 FYCGHTFGIRLIYPGSLFLIHNLLWSGLLSGRTQLVEYTTG 772
+ HT G R++YPGS++L+ L LL G+ +LVE G
Sbjct: 177 YLVAHTLGRRMLYPGSVYLLQKALMPVLLQGQARLVEECNG 217
>AL670886-33|CAM25029.1| 264|Homo sapiens HLA-B associated
transcript 5 protein.
Length = 264
Score = 40.3 bits (90), Expect = 0.008
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2
Query: 650 FYCGHTFGIRLIYPGSLFLIHNLLWSGLLSGRTQLVEYTTG 772
+ HT G R++YPGS++L+ L LL G+ +LVE G
Sbjct: 177 YLVAHTLGRRMLYPGSVYLLQKALMPVLLQGQARLVEECNG 217
>AL662899-17|CAM25666.1| 264|Homo sapiens HLA-B associated
transcript 5 protein.
Length = 264
Score = 40.3 bits (90), Expect = 0.008
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +2
Query: 650 FYCGHTFGIRLIYPGSLFLIHNLLWSGLLSGRTQLVEYTTG 772
+ HT G R++YPGS++L+ L LL G+ +LVE G
Sbjct: 177 YLVAHTLGRRMLYPGSVYLLQKALMPVLLQGQARLVEECNG 217
>AK001207-1|BAA91553.1| 339|Homo sapiens protein ( Homo sapiens
cDNA FLJ10345 fis, clone NT2RM2000984. ).
Length = 339
Score = 31.5 bits (68), Expect = 3.5
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2
Query: 680 LIYPGSLFLIHNLLWSGLLSGRTQLVEYTTG 772
++YPGS++L+ L LL G+ +LVE G
Sbjct: 1 MLYPGSVYLLQKALMPVLLQGQARLVEECNG 31
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,976,432
Number of Sequences: 237096
Number of extensions: 2517454
Number of successful extensions: 8112
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 7920
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8112
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9367263024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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