Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00630
         (756 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VY52 Cluster: CG32597-PA; n=1; Drosophila melanogaste...    62   1e-08
UniRef50_Q5TTR7 Cluster: ENSANGP00000026116; n=1; Anopheles gamb...    60   6e-08
UniRef50_Q17GK1 Cluster: Putative uncharacterized protein; n=2; ...    60   8e-08
UniRef50_Q3AGR0 Cluster: Dephospho-CoA kinase; n=11; Cyanobacter...    38   0.20 
UniRef50_Q4J1J7 Cluster: Binding-protein-dependent transport sys...    38   0.35 
UniRef50_A6RA32 Cluster: Predicted protein; n=1; Ajellomyces cap...    34   4.4  
UniRef50_UPI00015B4F67 Cluster: PREDICTED: similar to GA13522-PA...    33   5.8  
UniRef50_Q9SHN5 Cluster: F7F22.5; n=7; Magnoliophyta|Rep: F7F22....    33   5.8  
UniRef50_A3FPN7 Cluster: Flap endonuclease 1; n=2; Cryptosporidi...    33   5.8  
UniRef50_Q7SG05 Cluster: Putative uncharacterized protein NCU026...    33   5.8  
UniRef50_A0AVY0 Cluster: Relaxase/mobilization nuclease family p...    33   7.6  

>UniRef50_Q9VY52 Cluster: CG32597-PA; n=1; Drosophila
           melanogaster|Rep: CG32597-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 321

 Score = 62.1 bits (144), Expect = 1e-08
 Identities = 25/38 (65%), Positives = 33/38 (86%)
 Frame = +3

Query: 342 FGSSVAIHKLRETKWFKHDEQNILCAVLESGFILEVRA 455
           FGSSVA+ KLRE+KWFK +EQ I CAV+E GF++E+R+
Sbjct: 80  FGSSVAVQKLRESKWFKPEEQRIFCAVVECGFVVEIRS 117



 Score = 53.6 bits (123), Expect = 5e-06
 Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
 Frame = +2

Query: 509 VAMWKKGKEKTKNPEQIDVYTVQ--QKGVRKRVIKTTLSAFWKQDSVIRINNVDDKQETP 682
           + + K  K+    PE I++Y+V+  + G  K +IK  L+  W     +RINN  DK++ P
Sbjct: 205 IVLCKVAKDNKPKPETIEIYSVKIRENGTYK-LIKMQLADIWSHGWELRINNFADKEKVP 263

Query: 683 NSEKDIRSKLDMA 721
           ++EKDIR+++ +A
Sbjct: 264 HNEKDIRNQVSVA 276


>UniRef50_Q5TTR7 Cluster: ENSANGP00000026116; n=1; Anopheles gambiae
           str. PEST|Rep: ENSANGP00000026116 - Anopheles gambiae
           str. PEST
          Length = 241

 Score = 60.1 bits (139), Expect = 6e-08
 Identities = 29/48 (60%), Positives = 36/48 (75%)
 Frame = +3

Query: 309 AQALFAPKKTRFGSSVAIHKLRETKWFKHDEQNILCAVLESGFILEVR 452
           A A   P+ + FGSSVAI KLRE+KWF   E+ I CAV+E+GFI+EVR
Sbjct: 1   AGATVGPRAS-FGSSVAIQKLRESKWFDAGEERIFCAVIENGFIVEVR 47



 Score = 42.3 bits (95), Expect = 0.012
 Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
 Frame = +2

Query: 551 EQIDVYTVQQKGVRKRVIKT---TLSAFWKQDSVIRINNVDDKQETPNSEKDIRSKLDMA 721
           E + +Y+V+ K   K+ +K    TL+  W+Q   +RINNV D+ +  + EKDI +++  A
Sbjct: 150 EHVKIYSVRMKENEKKPMKVYCVTLANLWQQGHQLRINNVADRTKKAHPEKDILAQVSYA 209


>UniRef50_Q17GK1 Cluster: Putative uncharacterized protein; n=2;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 233

 Score = 59.7 bits (138), Expect = 8e-08
 Identities = 26/41 (63%), Positives = 32/41 (78%)
 Frame = +3

Query: 330 KKTRFGSSVAIHKLRETKWFKHDEQNILCAVLESGFILEVR 452
           K   FGSSVAI KLRE+KWF   E+ I CAV+E+GFI+E+R
Sbjct: 49  KSGSFGSSVAIQKLRESKWFDRGEERIFCAVIEAGFIVELR 89



 Score = 43.2 bits (97), Expect = 0.007
 Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
 Frame = +2

Query: 530 KEKTK-NPEQIDVYTVQQKGVRKR--VIKTTLSAFWKQDSVIRINNVDDKQETPNSEKDI 700
           K+ TK   E I +Y+V+     KR  V  ++L   W+Q   IRINN+ DK +  ++EKDI
Sbjct: 106 KKLTKPTAENIKIYSVKLSDSHKRLKVYNSSLDQLWQQGYQIRINNLCDKAKKAHNEKDI 165

Query: 701 RSKLDMA 721
            +++  A
Sbjct: 166 MAQIKYA 172


>UniRef50_Q3AGR0 Cluster: Dephospho-CoA kinase; n=11;
           Cyanobacteria|Rep: Dephospho-CoA kinase - Synechococcus
           sp. (strain CC9605)
          Length = 207

 Score = 38.3 bits (85), Expect = 0.20
 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
 Frame = +3

Query: 213 RNLPEFPADQAARKTLAP-QPTVKGLLSRFGS--QAQALFAPKKTRFGSSVAIHKLRETK 383
           + LP   ADQ AR+ LAP  P    ++ R+GS  +A+A  A  +   G  +  H   E +
Sbjct: 32  QGLPVLDADQFAREALAPGHPATNSVMQRYGSTVRAEATEAIDRAALG-RIVFHDPAERR 90

Query: 384 WFKH 395
           W +H
Sbjct: 91  WLEH 94


>UniRef50_Q4J1J7 Cluster: Binding-protein-dependent transport
           systems inner membrane component precursor; n=2;
           Proteobacteria|Rep: Binding-protein-dependent transport
           systems inner membrane component precursor - Azotobacter
           vinelandii AvOP
          Length = 272

 Score = 37.5 bits (83), Expect = 0.35
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = -1

Query: 387 TTWSRGVCGWPPKIQNVSSWGRKVLEPGSR--IWTVGPSPSAAALGFFGRLDLLETP 223
           T W+ G+  WPP  Q +SSWG+ +++  S     T G   +A  LG     +L   P
Sbjct: 53  TLWTLGLDAWPPDFQRLSSWGKPLMDTLSMSVAGTAGGILAALPLGALAARNLAPAP 109


>UniRef50_A6RA32 Cluster: Predicted protein; n=1; Ajellomyces
           capsulatus NAm1|Rep: Predicted protein - Ajellomyces
           capsulatus NAm1
          Length = 1163

 Score = 33.9 bits (74), Expect = 4.4
 Identities = 27/115 (23%), Positives = 47/115 (40%)
 Frame = +2

Query: 254 NPSAAADGEGPTVQIREPGSSTFRPQEDTFWIFGGHPQTPRDQVV*AR*TEHIMRCSGIR 433
           N  A +  +G   +    G ++  P      I G +P   R +   A+    +M  S I 
Sbjct: 86  NKPAQSAAQGDLTEPTPNGKNSISPASANSHIRGSNPTPTRSRTKEAKPRPKLMLNSNIT 145

Query: 434 IHPRSASSRPFAARFDSLTRLPYVRVAMWKKGKEKTKNPEQIDVYTVQQKGVRKR 598
            HP SA +RP       +T     +   WK+    T  P + D++ +  + ++KR
Sbjct: 146 KHPMSADARPNPVTSKQVT---LRKDTSWKR-PSFTSQPSEEDLFYMLIRRLKKR 196


>UniRef50_UPI00015B4F67 Cluster: PREDICTED: similar to GA13522-PA;
           n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
           GA13522-PA - Nasonia vitripennis
          Length = 1009

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 23/87 (26%), Positives = 39/87 (44%)
 Frame = +2

Query: 494 LPYVRVAMWKKGKEKTKNPEQIDVYTVQQKGVRKRVIKTTLSAFWKQDSVIRINNVDDKQ 673
           L ++    +KK +E + N E++DV    Q  +    I    S    + S    N +D  Q
Sbjct: 560 LSFIVSEQYKKLQE-SMNDEKLDVSIDDQTSIINGTISDNSSLLVGEHSSYARNKLDQLQ 618

Query: 674 ETPNSEKDIRSKLDMALSPDSRETGII 754
           E  N++      L  +L P+S+  GI+
Sbjct: 619 ERLNNKMQALQALKTSLKPESKVLGIL 645


>UniRef50_Q9SHN5 Cluster: F7F22.5; n=7; Magnoliophyta|Rep: F7F22.5 -
           Arabidopsis thaliana (Mouse-ear cress)
          Length = 322

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 16/33 (48%), Positives = 20/33 (60%)
 Frame = +3

Query: 303 SQAQALFAPKKTRFGSSVAIHKLRETKWFKHDE 401
           S A +L   K  RFG   + H+LR TKWFK D+
Sbjct: 7   SSAISLLDIKLRRFGVGASNHELRLTKWFKGDQ 39


>UniRef50_A3FPN7 Cluster: Flap endonuclease 1; n=2;
           Cryptosporidium|Rep: Flap endonuclease 1 -
           Cryptosporidium parvum Iowa II
          Length = 490

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
 Frame = +2

Query: 530 KEKTKNPEQIDVYTVQQKGVRKRVIKTTLSAFWKQDSVIRINNVDDKQETPNSEK---DI 700
           KE+  N  +++ Y  + K  + +  +T L  F+K  S  R N  +     P SEK   + 
Sbjct: 327 KEQNFNEARVNSYCERIKKSKNKTSQTCLDGFFKTASNERKNTHETPSRPPLSEKQKSET 386

Query: 701 RSKLDMALSPDSRETGI 751
           R ++D +LS D ++  I
Sbjct: 387 RKEVDSSLSCDKKKVKI 403


>UniRef50_Q7SG05 Cluster: Putative uncharacterized protein
           NCU02615.1; n=2; Sordariomycetes|Rep: Putative
           uncharacterized protein NCU02615.1 - Neurospora crassa
          Length = 421

 Score = 33.5 bits (73), Expect = 5.8
 Identities = 14/32 (43%), Positives = 21/32 (65%)
 Frame = +3

Query: 222 PEFPADQAARKTLAPQPTVKGLLSRFGSQAQA 317
           P +P + AAR  +A Q   + + +R+GSQAQA
Sbjct: 143 PAYPGNNAARGGMAAQRAAQAIANRYGSQAQA 174


>UniRef50_A0AVY0 Cluster: Relaxase/mobilization nuclease family
           protein; n=4; Arthrobacter|Rep: Relaxase/mobilization
           nuclease family protein - Arthrobacter sp. (strain FB24)
          Length = 546

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 20/69 (28%), Positives = 31/69 (44%)
 Frame = +1

Query: 457 KTLCRQIRLSHQTTICTRRHVEEG*RKNKEPRTDRRVHGSTERCEKTCDKNNVKRILEAR 636
           K  CR   ++H T+     H+       +E  T    HG  ++ ++TC +  VK  LE +
Sbjct: 136 KAQCRWAAINHGTSENGNHHIHLAVSLIREDGTKASTHGDYKKAQQTCRELEVKYGLE-Q 194

Query: 637 LCYTHQQRG 663
           L   H  RG
Sbjct: 195 LSSVHATRG 203


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 832,685,714
Number of Sequences: 1657284
Number of extensions: 18090370
Number of successful extensions: 55719
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 53141
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55692
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62558016040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)