Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00630
         (756 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    24   5.8  
AJ304412-1|CAC39105.1|  196|Anopheles gambiae dynamin protein.         23   7.7  

>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 10/33 (30%), Positives = 15/33 (45%)
 Frame = +3

Query: 162  ENCF*IRHRSGFNGSEVRNLPEFPADQAARKTL 260
            +NC     R GF G+E  N   +   + +  TL
Sbjct: 1839 DNCLQYEARKGFAGAEANNAANYQLKRDSETTL 1871


>AJ304412-1|CAC39105.1|  196|Anopheles gambiae dynamin protein.
          Length = 196

 Score = 23.4 bits (48), Expect = 7.7
 Identities = 18/60 (30%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
 Frame = +2

Query: 143 FLNYRIRELFLNSSQEWVQWKRGS*LAGVSSRSSRPKN----PSAAADGE-GPTVQIREP 307
           + +Y+  EL   S+ +   WK     AGV      P N     +  + GE GPT Q  +P
Sbjct: 33  YKDYKQLELSCESTDDVDSWKASFLRAGVYPEKDTPANGDETEAEESGGESGPTGQSLDP 92


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 872,642
Number of Sequences: 2352
Number of extensions: 19802
Number of successful extensions: 37
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78170964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)