Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00629
(669 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_O97182 Cluster: CG8978-PA, isoform A; n=4; Endopterygot... 101 2e-20
UniRef50_Q92747 Cluster: Actin-related protein 2/3 complex subun... 94 3e-18
UniRef50_Q5KFQ5 Cluster: Structural constituent of cytoskeleton,... 93 6e-18
UniRef50_Q6CE98 Cluster: Yarrowia lipolytica chromosome B of str... 92 1e-17
UniRef50_P78774 Cluster: Probable ARP2/3 complex 41 kDa subunit;... 91 2e-17
UniRef50_Q9U1R7 Cluster: Putative uncharacterized protein arx-3;... 87 4e-16
UniRef50_UPI00005A5801 Cluster: PREDICTED: similar to Actin-rela... 86 8e-16
UniRef50_P38328 Cluster: Probable ARP2/3 complex 41 kDa subunit;... 82 1e-14
UniRef50_A3LXY4 Cluster: Predicted protein; n=17; Ascomycota|Rep... 81 2e-14
UniRef50_Q3E7T1 Cluster: Uncharacterized protein At2g30910.2; n=... 73 5e-12
UniRef50_O96622 Cluster: P41-Arc; n=2; Dictyostelium discoideum|... 68 2e-10
UniRef50_UPI000049A5C9 Cluster: ARP2/3 complex 41 kDa subunit; n... 67 4e-10
UniRef50_A2DAJ2 Cluster: Putative uncharacterized protein; n=1; ... 56 8e-07
UniRef50_Q22Y88 Cluster: Putative uncharacterized protein; n=1; ... 44 0.004
UniRef50_A0C9A5 Cluster: Chromosome undetermined scaffold_16, wh... 39 0.13
UniRef50_UPI0000EBF112 Cluster: PREDICTED: similar to actin rela... 37 0.51
UniRef50_Q388S8 Cluster: Actin related protein 2/3 complex, puta... 33 4.7
UniRef50_A4S4Y5 Cluster: Predicted protein; n=2; Ostreococcus|Re... 33 8.2
>UniRef50_O97182 Cluster: CG8978-PA, isoform A; n=4;
Endopterygota|Rep: CG8978-PA, isoform A - Drosophila
melanogaster (Fruit fly)
Length = 377
Score = 101 bits (241), Expect = 2e-20
Identities = 60/121 (49%), Positives = 67/121 (55%), Gaps = 4/121 (3%)
Frame = +1
Query: 175 MAQTLTFGDSCAPITCHAWNKDRSQIA----SHQTIMKFTYTKGRK*LEANKQPCGTRP* 342
MA+T TFG S A ITCHAWNKDR+QIA +H+ + K + Q R
Sbjct: 1 MAETYTFGTSLASITCHAWNKDRTQIALSPNNHEIHIYSREGSDWKLADVLNQH-DLRVM 59
Query: 343 SDGD*LGSQHQPYCYVFVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMETSLLS 522
+ C DRNAYVWTQGDDGKW LVLLRINRAATCVKWSP E
Sbjct: 60 GIDWAKNTNRIVSCAA--DRNAYVWTQGDDGKWKPALVLLRINRAATCVKWSPAENKFAV 117
Query: 523 G 525
G
Sbjct: 118 G 118
Score = 95.9 bits (228), Expect = 8e-19
Identities = 39/44 (88%), Positives = 43/44 (97%)
Frame = +3
Query: 507 DKFAVGSGARLISICYFEKENNWWVSKHIKKPIRSTVTSIDWHP 638
+KFAVGSGARLIS+CYFE EN+WWVSKHIKKPIRSTVTS+DWHP
Sbjct: 113 NKFAVGSGARLISVCYFESENDWWVSKHIKKPIRSTVTSLDWHP 156
Score = 60.1 bits (139), Expect = 5e-08
Identities = 26/39 (66%), Positives = 32/39 (82%), Gaps = 1/39 (2%)
Frame = +2
Query: 281 HI-QKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCS 394
HI +EG+DWK + L +HDLRVMGIDWA NTNRIV+C+
Sbjct: 36 HIYSREGSDWKLADVLNQHDLRVMGIDWAKNTNRIVSCA 74
>UniRef50_Q92747 Cluster: Actin-related protein 2/3 complex subunit
1A; n=73; Metazoa|Rep: Actin-related protein 2/3 complex
subunit 1A - Homo sapiens (Human)
Length = 370
Score = 93.9 bits (223), Expect = 3e-18
Identities = 53/127 (41%), Positives = 65/127 (51%)
Frame = +3
Query: 258 SPNNNEVHIYKRKEMTGSKQTTLWNTTLE*WGLIGLPTPTXXXXXXXXXXXXXDSRR*WE 437
SPNN+EVHIYK+ K L G+ P S++
Sbjct: 26 SPNNHEVHIYKKNGSQWVKAHELKEHNGHITGIDWAPKSDRIVTCGADRNAYVWSQKDGV 85
Query: 438 MGNYSCSSAYQPSSDLREMVSHGDKFAVGSGARLISICYFEKENNWWVSKHIKKPIRSTV 617
++ + +KFAVGSGARLIS+CYFE EN+WWVSKHIKKPIRSTV
Sbjct: 86 WKPTLVILRINRAATFVKWSPLENKFAVGSGARLISVCYFESENDWWVSKHIKKPIRSTV 145
Query: 618 TSIDWHP 638
S+DWHP
Sbjct: 146 LSLDWHP 152
Score = 77.0 bits (181), Expect = 4e-13
Identities = 48/107 (44%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
Frame = +1
Query: 211 PITCHAWNKDRSQIA-SHQTIMKFTYTK-GRK*LEANKQPCGTRP*SDGD*LGSQHQPYC 384
PITCHAWN+DR+QIA S Y K G + ++A++ + D +
Sbjct: 10 PITCHAWNRDRTQIALSPNNHEVHIYKKNGSQWVKAHELKEHNGHITGID-WAPKSDRIV 68
Query: 385 YVFVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMETSLLSG 525
DRNAYVW+Q DG W TLV+LRINRAAT VKWSP+E G
Sbjct: 69 TCGADRNAYVWSQ-KDGVWKPTLVILRINRAATFVKWSPLENKFAVG 114
Score = 46.8 bits (106), Expect = 5e-04
Identities = 19/38 (50%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Frame = +2
Query: 281 HI-QKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTC 391
HI +K G+ W + + L EH+ + GIDWAP ++RIVTC
Sbjct: 33 HIYKKNGSQWVKAHELKEHNGHITGIDWAPKSDRIVTC 70
>UniRef50_Q5KFQ5 Cluster: Structural constituent of cytoskeleton,
putative; n=2; Basidiomycota|Rep: Structural constituent
of cytoskeleton, putative - Cryptococcus neoformans
(Filobasidiella neoformans)
Length = 413
Score = 93.1 bits (221), Expect = 6e-18
Identities = 36/44 (81%), Positives = 42/44 (95%)
Frame = +3
Query: 507 DKFAVGSGARLISICYFEKENNWWVSKHIKKPIRSTVTSIDWHP 638
DKFAVGSGAR I++CYF++ENNWWVSKH+KKP+RSTV SIDWHP
Sbjct: 112 DKFAVGSGARTIAVCYFDEENNWWVSKHVKKPLRSTVLSIDWHP 155
Score = 62.5 bits (145), Expect = 9e-09
Identities = 29/43 (67%), Positives = 30/43 (69%)
Frame = +1
Query: 397 DRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMETSLLSG 525
DRNAYVWT + G W LVLLRINRAATCVKWSP E G
Sbjct: 76 DRNAYVWTPTESG-WKPALVLLRINRAATCVKWSPNEDKFAVG 117
Score = 50.4 bits (115), Expect = 4e-05
Identities = 21/39 (53%), Positives = 27/39 (69%), Gaps = 1/39 (2%)
Frame = +2
Query: 281 HI-QKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCS 394
HI Q++G +W + L EHD + I WAPN+NRIVTCS
Sbjct: 36 HIYQRQGAEWIHKDTLAEHDKLITAISWAPNSNRIVTCS 74
>UniRef50_Q6CE98 Cluster: Yarrowia lipolytica chromosome B of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome B of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 376
Score = 91.9 bits (218), Expect = 1e-17
Identities = 35/45 (77%), Positives = 42/45 (93%)
Frame = +3
Query: 504 GDKFAVGSGARLISICYFEKENNWWVSKHIKKPIRSTVTSIDWHP 638
G KFAVGSGAR+I++CYFE EN+WW+SKHIKKPIRST+TS+ WHP
Sbjct: 111 GSKFAVGSGARIIAVCYFEAENDWWISKHIKKPIRSTITSVAWHP 155
Score = 52.4 bits (120), Expect = 1e-05
Identities = 23/35 (65%), Positives = 25/35 (71%)
Frame = +1
Query: 397 DRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSP 501
DRNA VW DG W LV+LRINRAAT V+WSP
Sbjct: 75 DRNATVWELQQDGTWKPFLVVLRINRAATTVRWSP 109
>UniRef50_P78774 Cluster: Probable ARP2/3 complex 41 kDa subunit;
n=6; Ascomycota|Rep: Probable ARP2/3 complex 41 kDa
subunit - Schizosaccharomyces pombe (Fission yeast)
Length = 377
Score = 91.5 bits (217), Expect = 2e-17
Identities = 34/44 (77%), Positives = 43/44 (97%)
Frame = +3
Query: 507 DKFAVGSGARLISICYFEKENNWWVSKHIKKPIRSTVTSIDWHP 638
DKFAVGSGAR+IS+CYFE+EN+WWVSKH+K+P+RST+ S+DWHP
Sbjct: 113 DKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHP 156
Score = 58.0 bits (134), Expect = 2e-07
Identities = 26/43 (60%), Positives = 30/43 (69%)
Frame = +1
Query: 397 DRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMETSLLSG 525
DRNAYV+ + DG W TLVLLR+NRAAT V+WSP E G
Sbjct: 76 DRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVG 118
Score = 48.4 bits (110), Expect = 2e-04
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +2
Query: 287 QKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCS 394
+++GN WK +HD V +DWAP +NRIVTCS
Sbjct: 39 EQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCS 74
>UniRef50_Q9U1R7 Cluster: Putative uncharacterized protein arx-3;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein arx-3 - Caenorhabditis elegans
Length = 368
Score = 87.0 bits (206), Expect = 4e-16
Identities = 34/43 (79%), Positives = 41/43 (95%)
Frame = +3
Query: 507 DKFAVGSGARLISICYFEKENNWWVSKHIKKPIRSTVTSIDWH 635
+KFAVGSGA+L+S+CY+EKEN+WWVSK IKKPIRSTVT +DWH
Sbjct: 115 NKFAVGSGAKLVSVCYYEKENDWWVSKQIKKPIRSTVTCLDWH 157
Score = 67.3 bits (157), Expect = 3e-10
Identities = 45/108 (41%), Positives = 55/108 (50%), Gaps = 3/108 (2%)
Frame = +1
Query: 211 PITCHAWNKDRSQIA---SHQTIMKFTYTKGRK*LEANKQPCGTRP*SDGD*LGSQHQPY 381
PITCHAWNKDR+QIA S I F + G + P + D G++
Sbjct: 16 PITCHAWNKDRTQIAVSASSNDIHIFEWRNGDW-QSIHTLSEHDLPVTGLD-WGTKTNRI 73
Query: 382 CYVFVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMETSLLSG 525
D+NA+VWT D W LVL+R NRAAT VKWSP+E G
Sbjct: 74 VSCSQDKNAFVWTF-DKNVWKPELVLVRFNRAATYVKWSPLENKFAVG 120
Score = 46.8 bits (106), Expect = 5e-04
Identities = 18/31 (58%), Positives = 22/31 (70%)
Frame = +2
Query: 302 DWKQTNNLVEHDLRVMGIDWAPNTNRIVTCS 394
DW+ + L EHDL V G+DW TNRIV+CS
Sbjct: 47 DWQSIHTLSEHDLPVTGLDWGTKTNRIVSCS 77
>UniRef50_UPI00005A5801 Cluster: PREDICTED: similar to Actin-related
protein 2/3 complex subunit 1B (ARP2/3 complex 41 kDa
subunit) (p41-ARC); n=1; Canis lupus familiaris|Rep:
PREDICTED: similar to Actin-related protein 2/3 complex
subunit 1B (ARP2/3 complex 41 kDa subunit) (p41-ARC) -
Canis familiaris
Length = 324
Score = 85.8 bits (203), Expect = 8e-16
Identities = 35/46 (76%), Positives = 41/46 (89%)
Frame = +3
Query: 501 HGDKFAVGSGARLISICYFEKENNWWVSKHIKKPIRSTVTSIDWHP 638
H +KFAVGSG+R+ISICYFE+EN+WWV K IKKPI STV S+DWHP
Sbjct: 79 HENKFAVGSGSRVISICYFEQENDWWVCKRIKKPICSTVLSLDWHP 124
Score = 42.7 bits (96), Expect = 0.008
Identities = 18/34 (52%), Positives = 21/34 (61%)
Frame = +1
Query: 424 GDDGKWATTLVLLRINRAATCVKWSPMETSLLSG 525
G W TLV+LRINRAA CV+W+P E G
Sbjct: 53 GQGCTWKPTLVILRINRAACCVRWAPHENKFAVG 86
Score = 36.3 bits (80), Expect = 0.67
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +1
Query: 211 PITCHAWNKDRSQIA 255
PI+CHAWNKDR+QIA
Sbjct: 10 PISCHAWNKDRTQIA 24
>UniRef50_P38328 Cluster: Probable ARP2/3 complex 41 kDa subunit;
n=6; Saccharomycetales|Rep: Probable ARP2/3 complex 41
kDa subunit - Saccharomyces cerevisiae (Baker's yeast)
Length = 384
Score = 82.2 bits (194), Expect = 1e-14
Identities = 31/45 (68%), Positives = 39/45 (86%)
Frame = +3
Query: 501 HGDKFAVGSGARLISICYFEKENNWWVSKHIKKPIRSTVTSIDWH 635
+G KFAVGS AR+I++CY+E ENNWWVSKHIKKPI+ST+ + WH
Sbjct: 118 NGYKFAVGSSARIIAVCYYEHENNWWVSKHIKKPIKSTINCLSWH 162
Score = 53.6 bits (123), Expect = 4e-06
Identities = 24/35 (68%), Positives = 26/35 (74%)
Frame = +1
Query: 397 DRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSP 501
DRNAYVW DG + TLVLLRINRAAT V W+P
Sbjct: 83 DRNAYVWEPLSDGTYKPTLVLLRINRAATSVTWAP 117
>UniRef50_A3LXY4 Cluster: Predicted protein; n=17; Ascomycota|Rep:
Predicted protein - Pichia stipitis (Yeast)
Length = 380
Score = 81.0 bits (191), Expect = 2e-14
Identities = 29/44 (65%), Positives = 38/44 (86%)
Frame = +3
Query: 504 GDKFAVGSGARLISICYFEKENNWWVSKHIKKPIRSTVTSIDWH 635
G KFAVGS R+I++CY+E ENNWWVSKH+KKP++ST+T + WH
Sbjct: 116 GQKFAVGSSDRIIAVCYYEAENNWWVSKHLKKPLKSTITCLSWH 159
Score = 46.4 bits (105), Expect = 6e-04
Identities = 23/36 (63%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = +1
Query: 397 DRNAYVWT-QGDDGKWATTLVLLRINRAATCVKWSP 501
DRNA VW G ++ TLVLLRINRAAT KWSP
Sbjct: 79 DRNALVWEYDGAANEYKPTLVLLRINRAATVCKWSP 114
>UniRef50_Q3E7T1 Cluster: Uncharacterized protein At2g30910.2; n=8;
Magnoliophyta|Rep: Uncharacterized protein At2g30910.2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 378
Score = 73.3 bits (172), Expect = 5e-12
Identities = 29/44 (65%), Positives = 37/44 (84%)
Frame = +3
Query: 507 DKFAVGSGARLISICYFEKENNWWVSKHIKKPIRSTVTSIDWHP 638
+KFAVGSGA+ + ICY+E+ENNWWVSK I+K S+VTS+ WHP
Sbjct: 112 NKFAVGSGAKTVCICYYEQENNWWVSKLIRKRHESSVTSVAWHP 155
Score = 58.4 bits (135), Expect = 1e-07
Identities = 37/106 (34%), Positives = 51/106 (48%), Gaps = 2/106 (1%)
Frame = +1
Query: 214 ITCHAWNKDRSQIA--SHQTIMKFTYTKGRK*LEANKQPCGTRP*SDGD*LGSQHQPYCY 387
ITCHAW+ D S +A + T + + + E G S+
Sbjct: 13 ITCHAWSPDLSMVALCPNNTEVHIYKSLSQDHWERLHVLQKHDQIVSGIDWSSKSNKIVT 72
Query: 388 VFVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMETSLLSG 525
V DRN+YVW+ + +W TLV+LR+NRAA CV+WSP E G
Sbjct: 73 VSHDRNSYVWSL-EGAEWVPTLVILRLNRAALCVQWSPKENKFAVG 117
Score = 35.5 bits (78), Expect = 1.2
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Frame = +2
Query: 281 HIQKE--GNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCS 394
HI K + W++ + L +HD V GIDW+ +N+IVT S
Sbjct: 35 HIYKSLSQDHWERLHVLQKHDQIVSGIDWSSKSNKIVTVS 74
>UniRef50_O96622 Cluster: P41-Arc; n=2; Dictyostelium
discoideum|Rep: P41-Arc - Dictyostelium discoideum
(Slime mold)
Length = 369
Score = 67.7 bits (158), Expect = 2e-10
Identities = 26/44 (59%), Positives = 36/44 (81%)
Frame = +3
Query: 507 DKFAVGSGARLISICYFEKENNWWVSKHIKKPIRSTVTSIDWHP 638
+KFAV +GA+L+ IC+FE+E++WW S HIKK +STV +DWHP
Sbjct: 111 NKFAVATGAKLVCICFFEEEHDWWASNHIKKH-KSTVLKVDWHP 153
Score = 59.3 bits (137), Expect = 8e-08
Identities = 28/37 (75%), Positives = 29/37 (78%)
Frame = +1
Query: 397 DRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPME 507
DRNAYVWT DG+W LVLLRINRAAT VKWSP E
Sbjct: 75 DRNAYVWTF-KDGQWKPVLVLLRINRAATHVKWSPQE 110
Score = 44.4 bits (100), Expect = 0.003
Identities = 19/35 (54%), Positives = 22/35 (62%)
Frame = +2
Query: 290 KEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCS 394
K+G W + L EHD V IDWAP TNRI+T S
Sbjct: 39 KQGTSWVVEHVLAEHDQLVTSIDWAPKTNRILTSS 73
Score = 32.7 bits (71), Expect = 8.2
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +2
Query: 290 KEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCS 394
+E +DW +N++ +H V+ +DW PN + T S
Sbjct: 128 EEEHDWWASNHIKKHKSTVLKVDWHPNNLLLATSS 162
>UniRef50_UPI000049A5C9 Cluster: ARP2/3 complex 41 kDa subunit; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: ARP2/3 complex 41
kDa subunit - Entamoeba histolytica HM-1:IMSS
Length = 366
Score = 66.9 bits (156), Expect = 4e-10
Identities = 43/115 (37%), Positives = 59/115 (51%), Gaps = 5/115 (4%)
Frame = +1
Query: 205 CAPITCHAWNKDRSQIA---SHQTIMKFTYTKGRK*LEANKQPCGTRP*SDGD*LGSQHQ 375
C I CH WN D ++IA + I+ ++ + EA R G +Q
Sbjct: 10 CDNIGCHCWNVDATKIAYSPCSKEIIVASFDGNKFTTEAKLNEHDARV--TGIDWAAQSN 67
Query: 376 PYCYVFVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMET--SLLSGQEL 534
DRNAYVWTQ ++G+W LVLLRI+ AAT +KWSP E+ + SG +L
Sbjct: 68 RIVSCSEDRNAYVWTQNENGEWVPVLVLLRIDFAATDIKWSPNESKFACASGNKL 122
Score = 58.0 bits (134), Expect = 2e-07
Identities = 22/43 (51%), Positives = 31/43 (72%)
Frame = +3
Query: 510 KFAVGSGARLISICYFEKENNWWVSKHIKKPIRSTVTSIDWHP 638
KFA SG +L+++C F +E+NWW S H+KK +STVT + W P
Sbjct: 113 KFACASGNKLVAVCRFNEESNWWASDHVKK-FKSTVTKVAWSP 154
Score = 44.4 bits (100), Expect = 0.003
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +2
Query: 293 EGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCS 394
+GN + L EHD RV GIDWA +NRIV+CS
Sbjct: 40 DGNKFTTEAKLNEHDARVTGIDWAAQSNRIVSCS 73
>UniRef50_A2DAJ2 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 373
Score = 56.0 bits (129), Expect = 8e-07
Identities = 38/101 (37%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Frame = +1
Query: 208 APITCHAWNKDRSQIASHQTIMKFTYTK--GRK*LEANKQPCGTRP*SDGD*LGSQHQPY 381
APITCHAWN+D + +A K G+K T+ S D ++
Sbjct: 10 APITCHAWNQDNTMLAMCPNTSDLLIYKVTGKKFELLYTLTEHTQVISSVDWC-YVNKKI 68
Query: 382 CYVFVDRNAYVWTQGDDGK-WATTLVLLRINRAATCVKWSP 501
DRNAYVWT + K W LV+LR+ RAAT V+W+P
Sbjct: 69 VTCSHDRNAYVWTFNEKEKTWTPELVILRLKRAATYVRWAP 109
>UniRef50_Q22Y88 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 400
Score = 43.6 bits (98), Expect = 0.004
Identities = 17/46 (36%), Positives = 30/46 (65%)
Frame = +3
Query: 501 HGDKFAVGSGARLISICYFEKENNWWVSKHIKKPIRSTVTSIDWHP 638
+G KFAVG G + Y++ +NNWW + IK P + +++++ +HP
Sbjct: 119 NGKKFAVGCGDHKAYVGYYDTKNNWWSTMAIKGP-KGSISALAFHP 163
>UniRef50_A0C9A5 Cluster: Chromosome undetermined scaffold_16, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_16,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 361
Score = 38.7 bits (86), Expect = 0.13
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +3
Query: 489 EMVSHGDKFAVGSGARLISICYFEKENNWWVSKHIKKPIRSTVTSIDWHP 638
E +G K VG+ + +FE++NNWW ++ I S+VT+ +HP
Sbjct: 107 EWAPNGQKCVVGTACHKAFVLFFEEKNNWWHNQQI-NCFYSSVTACRFHP 155
>UniRef50_UPI0000EBF112 Cluster: PREDICTED: similar to actin related
protein 2/3 complex subunit 1A, partial; n=1; Bos
taurus|Rep: PREDICTED: similar to actin related protein
2/3 complex subunit 1A, partial - Bos taurus
Length = 141
Score = 36.7 bits (81), Expect = 0.51
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +1
Query: 211 PITCHAWNKDRSQIA 255
PITCHAWN+DR+QIA
Sbjct: 10 PITCHAWNRDRTQIA 24
>UniRef50_Q388S8 Cluster: Actin related protein 2/3 complex,
putative; n=4; Trypanosoma|Rep: Actin related protein
2/3 complex, putative - Trypanosoma brucei
Length = 469
Score = 33.5 bits (73), Expect = 4.7
Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Frame = +1
Query: 397 DRNAYVWTQGDDGKWATTLVLL--RINRAATCVKWS 498
DR AYVW + KW +VLL + R TC W+
Sbjct: 165 DRMAYVWYRDSKEKWKPQMVLLDVGVKRGLTCCAWN 200
>UniRef50_A4S4Y5 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 358
Score = 32.7 bits (71), Expect = 8.2
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +1
Query: 397 DRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMETSLLSGQ 528
DR+ Y W+Q DGK A LL+ NRA +E ++ + +
Sbjct: 116 DRDMYFWSQESDGKDAMEAKLLKFNRAVNTNVGEALEENIAASE 159
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 699,844,917
Number of Sequences: 1657284
Number of extensions: 14733553
Number of successful extensions: 33468
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 32241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33452
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51239674196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -