Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00629
         (669 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    22   4.0  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    22   4.0  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           21   9.1  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 45  GILFLKIKRPFFLVP 1
           GI+FL I  P FL+P
Sbjct: 123 GIIFLSILIPHFLLP 137


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -1

Query: 45  GILFLKIKRPFFLVP 1
           GI+FL I  P FL+P
Sbjct: 123 GIIFLSILIPHFLLP 137


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 7/21 (33%), Positives = 11/21 (52%)
 Frame = -1

Query: 663 EPATSKMLWDANQ*MSQSNEW 601
           +P+TS   W  N   + +N W
Sbjct: 368 QPSTSNNRWHNNNGNNSNNHW 388


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,005
Number of Sequences: 336
Number of extensions: 3958
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)