Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00629
(669 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC054027-1|AAH54027.1| 370|Homo sapiens actin related protein 2... 94 5e-19
BC047889-1|AAH47889.2| 370|Homo sapiens actin related protein 2... 94 5e-19
BC039594-1|AAH39594.2| 370|Homo sapiens actin related protein 2... 94 5e-19
AK223015-1|BAD96735.1| 365|Homo sapiens actin related protein 2... 94 5e-19
AC004834-1|AAS00381.1| 166|Homo sapiens unknown protein. 94 5e-19
AB209059-1|BAD92296.1| 401|Homo sapiens actin related protein 2... 94 5e-19
Y08999-1|CAA70203.1| 370|Homo sapiens Sop2p-like protein protein. 93 6e-19
BC007555-1|AAH07555.1| 372|Homo sapiens actin related protein 2... 90 8e-18
BC002988-1|AAH02988.2| 372|Homo sapiens actin related protein 2... 90 8e-18
BC002562-1|AAH02562.1| 372|Homo sapiens actin related protein 2... 90 8e-18
AF006084-1|AAB64189.1| 372|Homo sapiens p41-Arc protein. 90 8e-18
U63810-1|AAC24948.1| 339|Homo sapiens WD40 protein Ciao 1 protein. 31 4.9
EF011618-1|ABK41108.1| 339|Homo sapiens CDW8/WDR39 protein. 31 4.9
CR456802-1|CAG33083.1| 339|Homo sapiens CIAO1 protein. 31 4.9
BC032812-1|AAH32812.1| 339|Homo sapiens cytosolic iron-sulfur p... 31 4.9
BC001395-1|AAH01395.1| 339|Homo sapiens cytosolic iron-sulfur p... 31 4.9
AK223257-1|BAD96977.1| 339|Homo sapiens WD40 protein Ciao1 vari... 31 4.9
AC004020-1|AAC23493.1| 339|Homo sapiens Unknown gene product pr... 31 4.9
>BC054027-1|AAH54027.1| 370|Homo sapiens actin related protein 2/3
complex, subunit 1A, 41kDa protein.
Length = 370
Score = 93.9 bits (223), Expect = 5e-19
Identities = 53/127 (41%), Positives = 65/127 (51%)
Frame = +3
Query: 258 SPNNNEVHIYKRKEMTGSKQTTLWNTTLE*WGLIGLPTPTXXXXXXXXXXXXXDSRR*WE 437
SPNN+EVHIYK+ K L G+ P S++
Sbjct: 26 SPNNHEVHIYKKNGSQWVKAHELKEHNGHITGIDWAPKSDRIVTCGADRNAYVWSQKDGV 85
Query: 438 MGNYSCSSAYQPSSDLREMVSHGDKFAVGSGARLISICYFEKENNWWVSKHIKKPIRSTV 617
++ + +KFAVGSGARLIS+CYFE EN+WWVSKHIKKPIRSTV
Sbjct: 86 WKPTLVILRINRAATFVKWSPLENKFAVGSGARLISVCYFESENDWWVSKHIKKPIRSTV 145
Query: 618 TSIDWHP 638
S+DWHP
Sbjct: 146 LSLDWHP 152
Score = 77.0 bits (181), Expect = 6e-14
Identities = 48/107 (44%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
Frame = +1
Query: 211 PITCHAWNKDRSQIA-SHQTIMKFTYTK-GRK*LEANKQPCGTRP*SDGD*LGSQHQPYC 384
PITCHAWN+DR+QIA S Y K G + ++A++ + D +
Sbjct: 10 PITCHAWNRDRTQIALSPNNHEVHIYKKNGSQWVKAHELKEHNGHITGID-WAPKSDRIV 68
Query: 385 YVFVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMETSLLSG 525
DRNAYVW+Q DG W TLV+LRINRAAT VKWSP+E G
Sbjct: 69 TCGADRNAYVWSQ-KDGVWKPTLVILRINRAATFVKWSPLENKFAVG 114
Score = 46.8 bits (106), Expect = 7e-05
Identities = 19/38 (50%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Frame = +2
Query: 281 HI-QKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTC 391
HI +K G+ W + + L EH+ + GIDWAP ++RIVTC
Sbjct: 33 HIYKKNGSQWVKAHELKEHNGHITGIDWAPKSDRIVTC 70
>BC047889-1|AAH47889.2| 370|Homo sapiens actin related protein 2/3
complex, subunit 1A, 41kDa protein.
Length = 370
Score = 93.9 bits (223), Expect = 5e-19
Identities = 53/127 (41%), Positives = 65/127 (51%)
Frame = +3
Query: 258 SPNNNEVHIYKRKEMTGSKQTTLWNTTLE*WGLIGLPTPTXXXXXXXXXXXXXDSRR*WE 437
SPNN+EVHIYK+ K L G+ P S++
Sbjct: 26 SPNNHEVHIYKKNGSQWVKAHELKEHNGHITGIDWAPKSDRIVTCGADRNAYVWSQKDGV 85
Query: 438 MGNYSCSSAYQPSSDLREMVSHGDKFAVGSGARLISICYFEKENNWWVSKHIKKPIRSTV 617
++ + +KFAVGSGARLIS+CYFE EN+WWVSKHIKKPIRSTV
Sbjct: 86 WKPTLVILRINRAATFVKWSPLENKFAVGSGARLISVCYFESENDWWVSKHIKKPIRSTV 145
Query: 618 TSIDWHP 638
S+DWHP
Sbjct: 146 LSLDWHP 152
Score = 77.0 bits (181), Expect = 6e-14
Identities = 48/107 (44%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
Frame = +1
Query: 211 PITCHAWNKDRSQIA-SHQTIMKFTYTK-GRK*LEANKQPCGTRP*SDGD*LGSQHQPYC 384
PITCHAWN+DR+QIA S Y K G + ++A++ + D +
Sbjct: 10 PITCHAWNRDRTQIALSPNNHEVHIYKKNGSQWVKAHELKEHNGHITGID-WAPKSDRIV 68
Query: 385 YVFVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMETSLLSG 525
DRNAYVW+Q DG W TLV+LRINRAAT VKWSP+E G
Sbjct: 69 TCGADRNAYVWSQ-KDGVWKPTLVILRINRAATFVKWSPLENKFAVG 114
Score = 46.8 bits (106), Expect = 7e-05
Identities = 19/38 (50%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Frame = +2
Query: 281 HI-QKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTC 391
HI +K G+ W + + L EH+ + GIDWAP ++RIVTC
Sbjct: 33 HIYKKNGSQWVKAHELKEHNGHITGIDWAPKSDRIVTC 70
>BC039594-1|AAH39594.2| 370|Homo sapiens actin related protein 2/3
complex, subunit 1A, 41kDa protein.
Length = 370
Score = 93.9 bits (223), Expect = 5e-19
Identities = 53/127 (41%), Positives = 65/127 (51%)
Frame = +3
Query: 258 SPNNNEVHIYKRKEMTGSKQTTLWNTTLE*WGLIGLPTPTXXXXXXXXXXXXXDSRR*WE 437
SPNN+EVHIYK+ K L G+ P S++
Sbjct: 26 SPNNHEVHIYKKNGSQWVKAHELKEHNGHITGIDWAPKSDRIVTCGADRNAYVWSQKDGV 85
Query: 438 MGNYSCSSAYQPSSDLREMVSHGDKFAVGSGARLISICYFEKENNWWVSKHIKKPIRSTV 617
++ + +KFAVGSGARLIS+CYFE EN+WWVSKHIKKPIRSTV
Sbjct: 86 WKPTLVILRINRAATFVKWSPLENKFAVGSGARLISVCYFESENDWWVSKHIKKPIRSTV 145
Query: 618 TSIDWHP 638
S+DWHP
Sbjct: 146 LSLDWHP 152
Score = 77.0 bits (181), Expect = 6e-14
Identities = 48/107 (44%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
Frame = +1
Query: 211 PITCHAWNKDRSQIA-SHQTIMKFTYTK-GRK*LEANKQPCGTRP*SDGD*LGSQHQPYC 384
PITCHAWN+DR+QIA S Y K G + ++A++ + D +
Sbjct: 10 PITCHAWNRDRTQIALSPNNHEVHIYKKNGSQWVKAHELKEHNGHITGID-WAPKSDRIV 68
Query: 385 YVFVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMETSLLSG 525
DRNAYVW+Q DG W TLV+LRINRAAT VKWSP+E G
Sbjct: 69 TCGADRNAYVWSQ-KDGVWKPTLVILRINRAATFVKWSPLENKFAVG 114
Score = 46.8 bits (106), Expect = 7e-05
Identities = 19/38 (50%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Frame = +2
Query: 281 HI-QKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTC 391
HI +K G+ W + + L EH+ + GIDWAP ++RIVTC
Sbjct: 33 HIYKKNGSQWVKAHELKEHNGHITGIDWAPKSDRIVTC 70
>AK223015-1|BAD96735.1| 365|Homo sapiens actin related protein 2/3
complex subunit 1A variant protein.
Length = 365
Score = 93.9 bits (223), Expect = 5e-19
Identities = 53/127 (41%), Positives = 65/127 (51%)
Frame = +3
Query: 258 SPNNNEVHIYKRKEMTGSKQTTLWNTTLE*WGLIGLPTPTXXXXXXXXXXXXXDSRR*WE 437
SPNN+EVHIYK+ K L G+ P S++
Sbjct: 21 SPNNHEVHIYKKNGSQWVKAHELKEHNGHITGIDWAPKSDRIVTCGADRNAYVWSQKDGV 80
Query: 438 MGNYSCSSAYQPSSDLREMVSHGDKFAVGSGARLISICYFEKENNWWVSKHIKKPIRSTV 617
++ + +KFAVGSGARLIS+CYFE EN+WWVSKHIKKPIRSTV
Sbjct: 81 WKPTLVILRINRAATFVKWSPLENKFAVGSGARLISVCYFESENDWWVSKHIKKPIRSTV 140
Query: 618 TSIDWHP 638
S+DWHP
Sbjct: 141 LSLDWHP 147
Score = 77.0 bits (181), Expect = 6e-14
Identities = 48/107 (44%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
Frame = +1
Query: 211 PITCHAWNKDRSQIA-SHQTIMKFTYTK-GRK*LEANKQPCGTRP*SDGD*LGSQHQPYC 384
PITCHAWN+DR+QIA S Y K G + ++A++ + D +
Sbjct: 5 PITCHAWNRDRTQIALSPNNHEVHIYKKNGSQWVKAHELKEHNGHITGID-WAPKSDRIV 63
Query: 385 YVFVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMETSLLSG 525
DRNAYVW+Q DG W TLV+LRINRAAT VKWSP+E G
Sbjct: 64 TCGADRNAYVWSQ-KDGVWKPTLVILRINRAATFVKWSPLENKFAVG 109
Score = 46.8 bits (106), Expect = 7e-05
Identities = 19/38 (50%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Frame = +2
Query: 281 HI-QKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTC 391
HI +K G+ W + + L EH+ + GIDWAP ++RIVTC
Sbjct: 28 HIYKKNGSQWVKAHELKEHNGHITGIDWAPKSDRIVTC 65
>AC004834-1|AAS00381.1| 166|Homo sapiens unknown protein.
Length = 166
Score = 93.9 bits (223), Expect = 5e-19
Identities = 53/127 (41%), Positives = 65/127 (51%)
Frame = +3
Query: 258 SPNNNEVHIYKRKEMTGSKQTTLWNTTLE*WGLIGLPTPTXXXXXXXXXXXXXDSRR*WE 437
SPNN+EVHIYK+ K L G+ P S++
Sbjct: 26 SPNNHEVHIYKKNGSQWVKAHELKEHNGHITGIDWAPKSDRIVTCGADRNAYVWSQKDGV 85
Query: 438 MGNYSCSSAYQPSSDLREMVSHGDKFAVGSGARLISICYFEKENNWWVSKHIKKPIRSTV 617
++ + +KFAVGSGARLIS+CYFE EN+WWVSKHIKKPIRSTV
Sbjct: 86 WKPTLVILRINRAATFVKWSPLENKFAVGSGARLISVCYFESENDWWVSKHIKKPIRSTV 145
Query: 618 TSIDWHP 638
S+DWHP
Sbjct: 146 LSLDWHP 152
Score = 77.0 bits (181), Expect = 6e-14
Identities = 48/107 (44%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
Frame = +1
Query: 211 PITCHAWNKDRSQIA-SHQTIMKFTYTK-GRK*LEANKQPCGTRP*SDGD*LGSQHQPYC 384
PITCHAWN+DR+QIA S Y K G + ++A++ + D +
Sbjct: 10 PITCHAWNRDRTQIALSPNNHEVHIYKKNGSQWVKAHELKEHNGHITGID-WAPKSDRIV 68
Query: 385 YVFVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMETSLLSG 525
DRNAYVW+Q DG W TLV+LRINRAAT VKWSP+E G
Sbjct: 69 TCGADRNAYVWSQ-KDGVWKPTLVILRINRAATFVKWSPLENKFAVG 114
Score = 46.8 bits (106), Expect = 7e-05
Identities = 19/38 (50%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Frame = +2
Query: 281 HI-QKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTC 391
HI +K G+ W + + L EH+ + GIDWAP ++RIVTC
Sbjct: 33 HIYKKNGSQWVKAHELKEHNGHITGIDWAPKSDRIVTC 70
>AB209059-1|BAD92296.1| 401|Homo sapiens actin related protein 2/3
complex subunit 1A variant protein.
Length = 401
Score = 93.9 bits (223), Expect = 5e-19
Identities = 53/127 (41%), Positives = 65/127 (51%)
Frame = +3
Query: 258 SPNNNEVHIYKRKEMTGSKQTTLWNTTLE*WGLIGLPTPTXXXXXXXXXXXXXDSRR*WE 437
SPNN+EVHIYK+ K L G+ P S++
Sbjct: 57 SPNNHEVHIYKKNGSQWVKAHELKEHNGHITGIDWAPKSDRIVTCGADRNAYVWSQKDGV 116
Query: 438 MGNYSCSSAYQPSSDLREMVSHGDKFAVGSGARLISICYFEKENNWWVSKHIKKPIRSTV 617
++ + +KFAVGSGARLIS+CYFE EN+WWVSKHIKKPIRSTV
Sbjct: 117 WKPTLVILRINRAATFVKWSPLENKFAVGSGARLISVCYFESENDWWVSKHIKKPIRSTV 176
Query: 618 TSIDWHP 638
S+DWHP
Sbjct: 177 LSLDWHP 183
Score = 77.0 bits (181), Expect = 6e-14
Identities = 48/107 (44%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
Frame = +1
Query: 211 PITCHAWNKDRSQIA-SHQTIMKFTYTK-GRK*LEANKQPCGTRP*SDGD*LGSQHQPYC 384
PITCHAWN+DR+QIA S Y K G + ++A++ + D +
Sbjct: 41 PITCHAWNRDRTQIALSPNNHEVHIYKKNGSQWVKAHELKEHNGHITGID-WAPKSDRIV 99
Query: 385 YVFVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMETSLLSG 525
DRNAYVW+Q DG W TLV+LRINRAAT VKWSP+E G
Sbjct: 100 TCGADRNAYVWSQ-KDGVWKPTLVILRINRAATFVKWSPLENKFAVG 145
Score = 46.8 bits (106), Expect = 7e-05
Identities = 19/38 (50%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Frame = +2
Query: 281 HI-QKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTC 391
HI +K G+ W + + L EH+ + GIDWAP ++RIVTC
Sbjct: 64 HIYKKNGSQWVKAHELKEHNGHITGIDWAPKSDRIVTC 101
>Y08999-1|CAA70203.1| 370|Homo sapiens Sop2p-like protein protein.
Length = 370
Score = 93.5 bits (222), Expect = 6e-19
Identities = 53/127 (41%), Positives = 65/127 (51%)
Frame = +3
Query: 258 SPNNNEVHIYKRKEMTGSKQTTLWNTTLE*WGLIGLPTPTXXXXXXXXXXXXXDSRR*WE 437
SPNN+EVHIYK+ K L G+ P S++
Sbjct: 26 SPNNHEVHIYKKNGSQWVKAHELKEHNGHITGIDWAPKSDRIVTCGADRNAYVWSQKDGV 85
Query: 438 MGNYSCSSAYQPSSDLREMVSHGDKFAVGSGARLISICYFEKENNWWVSKHIKKPIRSTV 617
++ + +KFAVGSGARLIS+CYFE EN+WWVSKHIKKPIRSTV
Sbjct: 86 WKPTLVILRINRAATFVKWSPLENKFAVGSGARLISVCYFEAENDWWVSKHIKKPIRSTV 145
Query: 618 TSIDWHP 638
S+DWHP
Sbjct: 146 LSLDWHP 152
Score = 77.0 bits (181), Expect = 6e-14
Identities = 48/107 (44%), Positives = 60/107 (56%), Gaps = 2/107 (1%)
Frame = +1
Query: 211 PITCHAWNKDRSQIA-SHQTIMKFTYTK-GRK*LEANKQPCGTRP*SDGD*LGSQHQPYC 384
PITCHAWN+DR+QIA S Y K G + ++A++ + D +
Sbjct: 10 PITCHAWNRDRTQIALSPNNHEVHIYKKNGSQWVKAHELKEHNGHITGID-WAPKSDRIV 68
Query: 385 YVFVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMETSLLSG 525
DRNAYVW+Q DG W TLV+LRINRAAT VKWSP+E G
Sbjct: 69 TCGADRNAYVWSQ-KDGVWKPTLVILRINRAATFVKWSPLENKFAVG 114
Score = 46.8 bits (106), Expect = 7e-05
Identities = 19/38 (50%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Frame = +2
Query: 281 HI-QKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTC 391
HI +K G+ W + + L EH+ + GIDWAP ++RIVTC
Sbjct: 33 HIYKKNGSQWVKAHELKEHNGHITGIDWAPKSDRIVTC 70
>BC007555-1|AAH07555.1| 372|Homo sapiens actin related protein 2/3
complex, subunit 1B, 41kDa protein.
Length = 372
Score = 89.8 bits (213), Expect = 8e-18
Identities = 36/44 (81%), Positives = 42/44 (95%)
Frame = +3
Query: 507 DKFAVGSGARLISICYFEKENNWWVSKHIKKPIRSTVTSIDWHP 638
+KFAVGSG+R+ISICYFE+EN+WWV KHIKKPIRSTV S+DWHP
Sbjct: 109 NKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHP 152
Score = 66.9 bits (156), Expect = 6e-11
Identities = 45/113 (39%), Positives = 56/113 (49%), Gaps = 8/113 (7%)
Frame = +1
Query: 211 PITCHAWNKDRSQIA----SHQTIMK----FTYTKGRK*LEANKQPCGTRP*SDGD*LGS 366
PI+CHAWNKDR+QIA +H+ + +TK + E N Q G
Sbjct: 10 PISCHAWNKDRTQIAICPNNHEVHIYEKSGAKWTKVHELKEHNGQVTGID-------WAP 62
Query: 367 QHQPYCYVFVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMETSLLSG 525
+ DRNAYVWT W TLV+LRINRAA CV+W+P E G
Sbjct: 63 ESNRIVTCGTDRNAYVWTL-KGRTWKPTLVILRINRAARCVRWAPNENKFAVG 114
Score = 48.8 bits (111), Expect = 2e-05
Identities = 21/38 (55%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Frame = +2
Query: 281 HI-QKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTC 391
HI +K G W + + L EH+ +V GIDWAP +NRIVTC
Sbjct: 33 HIYEKSGAKWTKVHELKEHNGQVTGIDWAPESNRIVTC 70
>BC002988-1|AAH02988.2| 372|Homo sapiens actin related protein 2/3
complex, subunit 1B, 41kDa protein.
Length = 372
Score = 89.8 bits (213), Expect = 8e-18
Identities = 36/44 (81%), Positives = 42/44 (95%)
Frame = +3
Query: 507 DKFAVGSGARLISICYFEKENNWWVSKHIKKPIRSTVTSIDWHP 638
+KFAVGSG+R+ISICYFE+EN+WWV KHIKKPIRSTV S+DWHP
Sbjct: 109 NKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHP 152
Score = 66.9 bits (156), Expect = 6e-11
Identities = 45/113 (39%), Positives = 56/113 (49%), Gaps = 8/113 (7%)
Frame = +1
Query: 211 PITCHAWNKDRSQIA----SHQTIMK----FTYTKGRK*LEANKQPCGTRP*SDGD*LGS 366
PI+CHAWNKDR+QIA +H+ + +TK + E N Q G
Sbjct: 10 PISCHAWNKDRTQIAICPNNHEVHIYEKSGAKWTKVHELKEHNGQVTGID-------WAP 62
Query: 367 QHQPYCYVFVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMETSLLSG 525
+ DRNAYVWT W TLV+LRINRAA CV+W+P E G
Sbjct: 63 ESNRIVTCGTDRNAYVWTL-KGRTWKPTLVILRINRAARCVRWAPNENKFAVG 114
Score = 48.8 bits (111), Expect = 2e-05
Identities = 21/38 (55%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Frame = +2
Query: 281 HI-QKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTC 391
HI +K G W + + L EH+ +V GIDWAP +NRIVTC
Sbjct: 33 HIYEKSGAKWTKVHELKEHNGQVTGIDWAPESNRIVTC 70
>BC002562-1|AAH02562.1| 372|Homo sapiens actin related protein 2/3
complex, subunit 1B, 41kDa protein.
Length = 372
Score = 89.8 bits (213), Expect = 8e-18
Identities = 36/44 (81%), Positives = 42/44 (95%)
Frame = +3
Query: 507 DKFAVGSGARLISICYFEKENNWWVSKHIKKPIRSTVTSIDWHP 638
+KFAVGSG+R+ISICYFE+EN+WWV KHIKKPIRSTV S+DWHP
Sbjct: 109 NKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHP 152
Score = 66.9 bits (156), Expect = 6e-11
Identities = 45/113 (39%), Positives = 56/113 (49%), Gaps = 8/113 (7%)
Frame = +1
Query: 211 PITCHAWNKDRSQIA----SHQTIMK----FTYTKGRK*LEANKQPCGTRP*SDGD*LGS 366
PI+CHAWNKDR+QIA +H+ + +TK + E N Q G
Sbjct: 10 PISCHAWNKDRTQIAICPNNHEVHIYEKSGAKWTKVHELKEHNGQVTGID-------WAP 62
Query: 367 QHQPYCYVFVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMETSLLSG 525
+ DRNAYVWT W TLV+LRINRAA CV+W+P E G
Sbjct: 63 ESNRIVTCGTDRNAYVWTL-KGRTWKPTLVILRINRAARCVRWAPNENKFAVG 114
Score = 48.8 bits (111), Expect = 2e-05
Identities = 21/38 (55%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Frame = +2
Query: 281 HI-QKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTC 391
HI +K G W + + L EH+ +V GIDWAP +NRIVTC
Sbjct: 33 HIYEKSGAKWTKVHELKEHNGQVTGIDWAPESNRIVTC 70
>AF006084-1|AAB64189.1| 372|Homo sapiens p41-Arc protein.
Length = 372
Score = 89.8 bits (213), Expect = 8e-18
Identities = 36/44 (81%), Positives = 42/44 (95%)
Frame = +3
Query: 507 DKFAVGSGARLISICYFEKENNWWVSKHIKKPIRSTVTSIDWHP 638
+KFAVGSG+R+ISICYFE+EN+WWV KHIKKPIRSTV S+DWHP
Sbjct: 109 NKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHP 152
Score = 66.9 bits (156), Expect = 6e-11
Identities = 45/113 (39%), Positives = 56/113 (49%), Gaps = 8/113 (7%)
Frame = +1
Query: 211 PITCHAWNKDRSQIA----SHQTIMK----FTYTKGRK*LEANKQPCGTRP*SDGD*LGS 366
PI+CHAWNKDR+QIA +H+ + +TK + E N Q G
Sbjct: 10 PISCHAWNKDRTQIAICPNNHEVHIYEKSGAKWTKVHELKEHNGQVTGID-------WAP 62
Query: 367 QHQPYCYVFVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMETSLLSG 525
+ DRNAYVWT W TLV+LRINRAA CV+W+P E G
Sbjct: 63 ESNRIVTCGTDRNAYVWTL-KGRTWKPTLVILRINRAARCVRWAPNENKFAVG 114
Score = 48.8 bits (111), Expect = 2e-05
Identities = 21/38 (55%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Frame = +2
Query: 281 HI-QKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTC 391
HI +K G W + + L EH+ +V GIDWAP +NRIVTC
Sbjct: 33 HIYEKSGAKWTKVHELKEHNGQVTGIDWAPESNRIVTC 70
>U63810-1|AAC24948.1| 339|Homo sapiens WD40 protein Ciao 1 protein.
Length = 339
Score = 30.7 bits (66), Expect = 4.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 287 QKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCS 394
+K +D++ L H+ V + WAP+ N + TCS
Sbjct: 89 KKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCS 124
>EF011618-1|ABK41108.1| 339|Homo sapiens CDW8/WDR39 protein.
Length = 339
Score = 30.7 bits (66), Expect = 4.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 287 QKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCS 394
+K +D++ L H+ V + WAP+ N + TCS
Sbjct: 89 KKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCS 124
>CR456802-1|CAG33083.1| 339|Homo sapiens CIAO1 protein.
Length = 339
Score = 30.7 bits (66), Expect = 4.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 287 QKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCS 394
+K +D++ L H+ V + WAP+ N + TCS
Sbjct: 89 KKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCS 124
>BC032812-1|AAH32812.1| 339|Homo sapiens cytosolic iron-sulfur
protein assembly 1 homolog (S. cerevisiae) protein.
Length = 339
Score = 30.7 bits (66), Expect = 4.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 287 QKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCS 394
+K +D++ L H+ V + WAP+ N + TCS
Sbjct: 89 KKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCS 124
>BC001395-1|AAH01395.1| 339|Homo sapiens cytosolic iron-sulfur
protein assembly 1 homolog (S. cerevisiae) protein.
Length = 339
Score = 30.7 bits (66), Expect = 4.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 287 QKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCS 394
+K +D++ L H+ V + WAP+ N + TCS
Sbjct: 89 KKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCS 124
>AK223257-1|BAD96977.1| 339|Homo sapiens WD40 protein Ciao1 variant
protein.
Length = 339
Score = 30.7 bits (66), Expect = 4.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 287 QKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCS 394
+K +D++ L H+ V + WAP+ N + TCS
Sbjct: 89 KKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCS 124
>AC004020-1|AAC23493.1| 339|Homo sapiens Unknown gene product
protein.
Length = 339
Score = 30.7 bits (66), Expect = 4.9
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 287 QKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCS 394
+K +D++ L H+ V + WAP+ N + TCS
Sbjct: 89 KKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCS 124
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 102,823,669
Number of Sequences: 237096
Number of extensions: 2339003
Number of successful extensions: 3946
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 3670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3934
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7591280850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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