Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00629
         (669 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058778-1|AAL14007.1|  377|Drosophila melanogaster SD06579p pro...   101   1e-21
AJ133649-1|CAB38634.1|  377|Drosophila melanogaster actin relate...   101   1e-21
AE014134-2408|AAN10852.1|  377|Drosophila melanogaster CG8978-PB...   101   1e-21
AE014134-2407|AAF53339.1|  377|Drosophila melanogaster CG8978-PA...   101   1e-21
AY061388-1|AAL28936.1|  335|Drosophila melanogaster LD31217p pro...    33   0.46 
AE013599-1967|AAF58195.1|  335|Drosophila melanogaster CG12797-P...    33   0.46 
BT016167-1|AAV37052.1| 1047|Drosophila melanogaster AT04626p pro...    31   1.4  
AY128462-1|AAM75055.1|  456|Drosophila melanogaster RE17371p pro...    31   1.4  
AY071477-1|AAL49099.1|  456|Drosophila melanogaster RE55020p pro...    31   1.4  
AY069414-1|AAL39559.1|  437|Drosophila melanogaster LD11036p pro...    31   1.4  
AJ222709-1|CAA10954.1| 1047|Drosophila melanogaster HIRA protein.      31   1.4  
AF071881-1|AAC64041.1|  454|Drosophila melanogaster Hira isoform...    31   1.4  
AF031081-1|AAC48360.1| 1061|Drosophila melanogaster HIRA homolog...    31   1.4  
AE014298-1052|AAF46267.1| 1047|Drosophila melanogaster CG12153-P...    31   1.4  
AE013599-104|AAF57313.3|  456|Drosophila melanogaster CG12792-PA...    31   1.4  
AY051458-1|AAK92882.1|  459|Drosophila melanogaster GH13040p pro...    30   2.5  
AE013599-1044|AAM68775.1|  459|Drosophila melanogaster CG12214-P...    30   2.5  
AE013599-1043|AAF58828.1|  459|Drosophila melanogaster CG12214-P...    30   2.5  
AY071013-1|AAL48635.1|  361|Drosophila melanogaster RE09223p pro...    29   4.3  
AE014297-3198|AAF56032.1|  361|Drosophila melanogaster CG6949-PA...    29   4.3  
AY061623-1|AAL29171.1|  553|Drosophila melanogaster SD09427p pro...    29   5.7  
AE014296-2921|AAF49331.1|  553|Drosophila melanogaster CG6322-PA...    29   5.7  

>AY058778-1|AAL14007.1|  377|Drosophila melanogaster SD06579p
           protein.
          Length = 377

 Score =  101 bits (241), Expect = 1e-21
 Identities = 60/121 (49%), Positives = 67/121 (55%), Gaps = 4/121 (3%)
 Frame = +1

Query: 175 MAQTLTFGDSCAPITCHAWNKDRSQIA----SHQTIMKFTYTKGRK*LEANKQPCGTRP* 342
           MA+T TFG S A ITCHAWNKDR+QIA    +H+  +        K  +   Q    R  
Sbjct: 1   MAETYTFGTSLASITCHAWNKDRTQIALSPNNHEIHIYSREGSDWKLADVLNQH-DLRVM 59

Query: 343 SDGD*LGSQHQPYCYVFVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMETSLLS 522
                  +     C    DRNAYVWTQGDDGKW   LVLLRINRAATCVKWSP E     
Sbjct: 60  GIDWAKNTNRIVSCAA--DRNAYVWTQGDDGKWKPALVLLRINRAATCVKWSPAENKFAV 117

Query: 523 G 525
           G
Sbjct: 118 G 118



 Score = 95.9 bits (228), Expect = 4e-20
 Identities = 39/44 (88%), Positives = 43/44 (97%)
 Frame = +3

Query: 507 DKFAVGSGARLISICYFEKENNWWVSKHIKKPIRSTVTSIDWHP 638
           +KFAVGSGARLIS+CYFE EN+WWVSKHIKKPIRSTVTS+DWHP
Sbjct: 113 NKFAVGSGARLISVCYFESENDWWVSKHIKKPIRSTVTSLDWHP 156



 Score = 60.1 bits (139), Expect = 3e-09
 Identities = 26/39 (66%), Positives = 32/39 (82%), Gaps = 1/39 (2%)
 Frame = +2

Query: 281 HI-QKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCS 394
           HI  +EG+DWK  + L +HDLRVMGIDWA NTNRIV+C+
Sbjct: 36  HIYSREGSDWKLADVLNQHDLRVMGIDWAKNTNRIVSCA 74


>AJ133649-1|CAB38634.1|  377|Drosophila melanogaster actin related
           complex p41 subunit protein.
          Length = 377

 Score =  101 bits (241), Expect = 1e-21
 Identities = 60/121 (49%), Positives = 67/121 (55%), Gaps = 4/121 (3%)
 Frame = +1

Query: 175 MAQTLTFGDSCAPITCHAWNKDRSQIA----SHQTIMKFTYTKGRK*LEANKQPCGTRP* 342
           MA+T TFG S A ITCHAWNKDR+QIA    +H+  +        K  +   Q    R  
Sbjct: 1   MAETYTFGTSLASITCHAWNKDRTQIALSPNNHEIHIYSREGSDWKLADVLNQH-DLRVM 59

Query: 343 SDGD*LGSQHQPYCYVFVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMETSLLS 522
                  +     C    DRNAYVWTQGDDGKW   LVLLRINRAATCVKWSP E     
Sbjct: 60  GIDWAKNTNRIVSCAA--DRNAYVWTQGDDGKWKPALVLLRINRAATCVKWSPAENKFAV 117

Query: 523 G 525
           G
Sbjct: 118 G 118



 Score = 95.9 bits (228), Expect = 4e-20
 Identities = 39/44 (88%), Positives = 43/44 (97%)
 Frame = +3

Query: 507 DKFAVGSGARLISICYFEKENNWWVSKHIKKPIRSTVTSIDWHP 638
           +KFAVGSGARLIS+CYFE EN+WWVSKHIKKPIRSTVTS+DWHP
Sbjct: 113 NKFAVGSGARLISVCYFESENDWWVSKHIKKPIRSTVTSLDWHP 156



 Score = 60.1 bits (139), Expect = 3e-09
 Identities = 26/39 (66%), Positives = 32/39 (82%), Gaps = 1/39 (2%)
 Frame = +2

Query: 281 HI-QKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCS 394
           HI  +EG+DWK  + L +HDLRVMGIDWA NTNRIV+C+
Sbjct: 36  HIYSREGSDWKLADVLNQHDLRVMGIDWAKNTNRIVSCA 74


>AE014134-2408|AAN10852.1|  377|Drosophila melanogaster CG8978-PB,
           isoform B protein.
          Length = 377

 Score =  101 bits (241), Expect = 1e-21
 Identities = 60/121 (49%), Positives = 67/121 (55%), Gaps = 4/121 (3%)
 Frame = +1

Query: 175 MAQTLTFGDSCAPITCHAWNKDRSQIA----SHQTIMKFTYTKGRK*LEANKQPCGTRP* 342
           MA+T TFG S A ITCHAWNKDR+QIA    +H+  +        K  +   Q    R  
Sbjct: 1   MAETYTFGTSLASITCHAWNKDRTQIALSPNNHEIHIYSREGSDWKLADVLNQH-DLRVM 59

Query: 343 SDGD*LGSQHQPYCYVFVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMETSLLS 522
                  +     C    DRNAYVWTQGDDGKW   LVLLRINRAATCVKWSP E     
Sbjct: 60  GIDWAKNTNRIVSCAA--DRNAYVWTQGDDGKWKPALVLLRINRAATCVKWSPAENKFAV 117

Query: 523 G 525
           G
Sbjct: 118 G 118



 Score = 95.9 bits (228), Expect = 4e-20
 Identities = 39/44 (88%), Positives = 43/44 (97%)
 Frame = +3

Query: 507 DKFAVGSGARLISICYFEKENNWWVSKHIKKPIRSTVTSIDWHP 638
           +KFAVGSGARLIS+CYFE EN+WWVSKHIKKPIRSTVTS+DWHP
Sbjct: 113 NKFAVGSGARLISVCYFESENDWWVSKHIKKPIRSTVTSLDWHP 156



 Score = 60.1 bits (139), Expect = 3e-09
 Identities = 26/39 (66%), Positives = 32/39 (82%), Gaps = 1/39 (2%)
 Frame = +2

Query: 281 HI-QKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCS 394
           HI  +EG+DWK  + L +HDLRVMGIDWA NTNRIV+C+
Sbjct: 36  HIYSREGSDWKLADVLNQHDLRVMGIDWAKNTNRIVSCA 74


>AE014134-2407|AAF53339.1|  377|Drosophila melanogaster CG8978-PA,
           isoform A protein.
          Length = 377

 Score =  101 bits (241), Expect = 1e-21
 Identities = 60/121 (49%), Positives = 67/121 (55%), Gaps = 4/121 (3%)
 Frame = +1

Query: 175 MAQTLTFGDSCAPITCHAWNKDRSQIA----SHQTIMKFTYTKGRK*LEANKQPCGTRP* 342
           MA+T TFG S A ITCHAWNKDR+QIA    +H+  +        K  +   Q    R  
Sbjct: 1   MAETYTFGTSLASITCHAWNKDRTQIALSPNNHEIHIYSREGSDWKLADVLNQH-DLRVM 59

Query: 343 SDGD*LGSQHQPYCYVFVDRNAYVWTQGDDGKWATTLVLLRINRAATCVKWSPMETSLLS 522
                  +     C    DRNAYVWTQGDDGKW   LVLLRINRAATCVKWSP E     
Sbjct: 60  GIDWAKNTNRIVSCAA--DRNAYVWTQGDDGKWKPALVLLRINRAATCVKWSPAENKFAV 117

Query: 523 G 525
           G
Sbjct: 118 G 118



 Score = 95.9 bits (228), Expect = 4e-20
 Identities = 39/44 (88%), Positives = 43/44 (97%)
 Frame = +3

Query: 507 DKFAVGSGARLISICYFEKENNWWVSKHIKKPIRSTVTSIDWHP 638
           +KFAVGSGARLIS+CYFE EN+WWVSKHIKKPIRSTVTS+DWHP
Sbjct: 113 NKFAVGSGARLISVCYFESENDWWVSKHIKKPIRSTVTSLDWHP 156



 Score = 60.1 bits (139), Expect = 3e-09
 Identities = 26/39 (66%), Positives = 32/39 (82%), Gaps = 1/39 (2%)
 Frame = +2

Query: 281 HI-QKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCS 394
           HI  +EG+DWK  + L +HDLRVMGIDWA NTNRIV+C+
Sbjct: 36  HIYSREGSDWKLADVLNQHDLRVMGIDWAKNTNRIVSCA 74


>AY061388-1|AAL28936.1|  335|Drosophila melanogaster LD31217p
           protein.
          Length = 335

 Score = 32.7 bits (71), Expect = 0.46
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +2

Query: 299 NDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCS 394
           NDW  T  L  H   V GID+  +  R+V+CS
Sbjct: 182 NDWDCTATLTSHTSTVWGIDFDADGERLVSCS 213


>AE013599-1967|AAF58195.1|  335|Drosophila melanogaster CG12797-PA
           protein.
          Length = 335

 Score = 32.7 bits (71), Expect = 0.46
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = +2

Query: 299 NDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCS 394
           NDW  T  L  H   V GID+  +  R+V+CS
Sbjct: 182 NDWDCTATLTSHTSTVWGIDFDADGERLVSCS 213


>BT016167-1|AAV37052.1| 1047|Drosophila melanogaster AT04626p
           protein.
          Length = 1047

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +2

Query: 284 IQKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSL 397
           +QK    WK    L  HD  V+ + W+PN   + +CS+
Sbjct: 112 MQKNHESWKCFYTLRGHDGDVLDLAWSPNDVYLASCSI 149


>AY128462-1|AAM75055.1|  456|Drosophila melanogaster RE17371p
           protein.
          Length = 456

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +1

Query: 400 RNAYVWTQGDDGKW-ATTLVLLRINRAATCVKWSPMETSLLSGQELD 537
           R+ +VWT  +DG W      L   +++   ++WSP E S+L+   +D
Sbjct: 245 RDIHVWTPVEDGTWKVDQRPLAGHSQSVEDLQWSPNERSVLASCSVD 291


>AY071477-1|AAL49099.1|  456|Drosophila melanogaster RE55020p
           protein.
          Length = 456

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +1

Query: 400 RNAYVWTQGDDGKW-ATTLVLLRINRAATCVKWSPMETSLLSGQELD 537
           R+ +VWT  +DG W      L   +++   ++WSP E S+L+   +D
Sbjct: 245 RDIHVWTPVEDGTWKVDQRPLAGHSQSVEDLQWSPNERSVLASCSVD 291


>AY069414-1|AAL39559.1|  437|Drosophila melanogaster LD11036p
           protein.
          Length = 437

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +2

Query: 284 IQKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSL 397
           +QK    WK    L  HD  V+ + W+PN   + +CS+
Sbjct: 112 MQKNHESWKCFYTLRGHDGDVLDLAWSPNDVYLASCSI 149


>AJ222709-1|CAA10954.1| 1047|Drosophila melanogaster HIRA protein.
          Length = 1047

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +2

Query: 284 IQKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSL 397
           +QK    WK    L  HD  V+ + W+PN   + +CS+
Sbjct: 112 MQKNHESWKCFYTLRGHDGDVLDLAWSPNDVYLASCSI 149


>AF071881-1|AAC64041.1|  454|Drosophila melanogaster Hira isoform
           protein.
          Length = 454

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +2

Query: 284 IQKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSL 397
           +QK    WK    L  HD  V+ + W+PN   + +CS+
Sbjct: 129 MQKNHESWKCFYTLRGHDGDVLDLAWSPNDVYLASCSI 166


>AF031081-1|AAC48360.1| 1061|Drosophila melanogaster HIRA homolog
           protein.
          Length = 1061

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +2

Query: 284 IQKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSL 397
           +QK    WK    L  HD  V+ + W+PN   + +CS+
Sbjct: 112 MQKNHESWKCFYTLRGHDGDVLDLAWSPNDVYLASCSI 149


>AE014298-1052|AAF46267.1| 1047|Drosophila melanogaster CG12153-PA
           protein.
          Length = 1047

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = +2

Query: 284 IQKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSL 397
           +QK    WK    L  HD  V+ + W+PN   + +CS+
Sbjct: 112 MQKNHESWKCFYTLRGHDGDVLDLAWSPNDVYLASCSI 149


>AE013599-104|AAF57313.3|  456|Drosophila melanogaster CG12792-PA
           protein.
          Length = 456

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +1

Query: 400 RNAYVWTQGDDGKW-ATTLVLLRINRAATCVKWSPMETSLLSGQELD 537
           R+ +VWT  +DG W      L   +++   ++WSP E S+L+   +D
Sbjct: 245 RDIHVWTPVEDGTWKVDQRPLAGHSQSVEDLQWSPNERSVLASCSVD 291


>AY051458-1|AAK92882.1|  459|Drosophila melanogaster GH13040p
           protein.
          Length = 459

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 17/62 (27%), Positives = 31/62 (50%)
 Frame = +2

Query: 287 QKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSLTVMLTSGLKEMMGNGQLLLFFCV 466
           Q + +DW +  +++EH  R+  ++ + N       +L    T  LK ++ NG  L + CV
Sbjct: 94  QNKLSDWSEVFSILEHMPRIEFLNLSKNQLASPIGTLPTAPTINLKSLVLNGTYLDWACV 153

Query: 467 ST 472
            T
Sbjct: 154 DT 155


>AE013599-1044|AAM68775.1|  459|Drosophila melanogaster CG12214-PB,
           isoform B protein.
          Length = 459

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 17/62 (27%), Positives = 31/62 (50%)
 Frame = +2

Query: 287 QKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSLTVMLTSGLKEMMGNGQLLLFFCV 466
           Q + +DW +  +++EH  R+  ++ + N       +L    T  LK ++ NG  L + CV
Sbjct: 94  QNKLSDWSEVFSILEHMPRIEFLNLSKNQLASPIGTLPTAPTINLKSLVLNGTYLDWACV 153

Query: 467 ST 472
            T
Sbjct: 154 DT 155


>AE013599-1043|AAF58828.1|  459|Drosophila melanogaster CG12214-PA,
           isoform A protein.
          Length = 459

 Score = 30.3 bits (65), Expect = 2.5
 Identities = 17/62 (27%), Positives = 31/62 (50%)
 Frame = +2

Query: 287 QKEGNDWKQTNNLVEHDLRVMGIDWAPNTNRIVTCSLTVMLTSGLKEMMGNGQLLLFFCV 466
           Q + +DW +  +++EH  R+  ++ + N       +L    T  LK ++ NG  L + CV
Sbjct: 94  QNKLSDWSEVFSILEHMPRIEFLNLSKNQLASPIGTLPTAPTINLKSLVLNGTYLDWACV 153

Query: 467 ST 472
            T
Sbjct: 154 DT 155


>AY071013-1|AAL48635.1|  361|Drosophila melanogaster RE09223p
           protein.
          Length = 361

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 20/85 (23%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
 Frame = +2

Query: 77  KFALTDQSPRI-SSRIAPTITISQELRNLK*NRKWHKR*LLVTHARR*HVMHGTRIEVKL 253
           KF  + + PR+  +R+   IT   +   +    ++H + +L  + R   +MHG+ I  K 
Sbjct: 215 KFLQSLEPPRVVHARVTEVITKENQFAQV--TVRFHSQQMLAIYDRFGRLMHGSEIITKD 272

Query: 254 LLTKQ**SSHIQKEGNDWKQTNNLV 328
           +L       HI  E   W+  + ++
Sbjct: 273 VLEYVVFEKHISNEYGKWRLHDKII 297


>AE014297-3198|AAF56032.1|  361|Drosophila melanogaster CG6949-PA
           protein.
          Length = 361

 Score = 29.5 bits (63), Expect = 4.3
 Identities = 20/85 (23%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
 Frame = +2

Query: 77  KFALTDQSPRI-SSRIAPTITISQELRNLK*NRKWHKR*LLVTHARR*HVMHGTRIEVKL 253
           KF  + + PR+  +R+   IT   +   +    ++H + +L  + R   +MHG+ I  K 
Sbjct: 215 KFLQSLEPPRVVHARVTEVITKENQFAQV--TVRFHSQQMLAIYDRFGRLMHGSEIITKD 272

Query: 254 LLTKQ**SSHIQKEGNDWKQTNNLV 328
           +L       HI  E   W+  + ++
Sbjct: 273 VLEYVVFEKHISNEYGKWRLHDKII 297


>AY061623-1|AAL29171.1|  553|Drosophila melanogaster SD09427p
           protein.
          Length = 553

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 305 WKQTNNLVEHDLRVMGIDWAPNTNRIVTCS 394
           W+    L  HD +V+ +D APN+  I T S
Sbjct: 512 WQPLKTLQGHDNKVISVDIAPNSQYIATTS 541


>AE014296-2921|AAF49331.1|  553|Drosophila melanogaster CG6322-PA
           protein.
          Length = 553

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +2

Query: 305 WKQTNNLVEHDLRVMGIDWAPNTNRIVTCS 394
           W+    L  HD +V+ +D APN+  I T S
Sbjct: 512 WQPLKTLQGHDNKVISVDIAPNSQYIATTS 541


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,439,724
Number of Sequences: 53049
Number of extensions: 694840
Number of successful extensions: 1607
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1607
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2889369000
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)