Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00627
(619 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 25 0.45
DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 25 0.78
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 23 3.2
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 23 3.2
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 23 3.2
AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor p... 22 4.2
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 22 4.2
AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor p... 22 4.2
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 21 9.6
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 21 9.6
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 21 9.6
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 25.4 bits (53), Expect = 0.45
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -1
Query: 391 SGTTAALPPHPKNIGKNADV-GTLGGAKXXXXXXXSRGLFACFFLLAQPSSP-WAPQLRV 218
+ TTAA P P ++ + V GT GGA +G LA +SP +P +
Sbjct: 44 TSTTAAATPTPPSVPVGSAVAGTAGGALFPGMAAAGKGAARSDDWLANANSPVGSPSAAL 103
Query: 217 LPALVV 200
P VV
Sbjct: 104 QPQHVV 109
>DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein.
Length = 120
Score = 24.6 bits (51), Expect = 0.78
Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -1
Query: 457 GGVACGDASS-TCAVCVGNCGRASGTTAALPPHPKNIGKNADV 332
G V+C + TC +C G CG + T P KN G A V
Sbjct: 63 GRVSCPVLRAYTCPIC-GACGDIAHTVKYCPKGTKNPGTLATV 104
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 22.6 bits (46), Expect = 3.2
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 6/71 (8%)
Frame = -2
Query: 558 NYNNNIFYTKQLIVSI*FRSKV-----YNFSSGRGPP*AVA-WLVATPPRPVLYALATAV 397
NYNNN Y K+L +I + ++ G PP + W+ P +
Sbjct: 95 NYNNNNNYNKKLYYNINYIEQIPVPVPVPIYCGNFPPRPMGPWISIQEQIPRF----RYI 150
Query: 396 GPPGPLRPYLP 364
GPP P ++P
Sbjct: 151 GPPTPFPRFIP 161
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 22.6 bits (46), Expect = 3.2
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 6/71 (8%)
Frame = -2
Query: 558 NYNNNIFYTKQLIVSI*FRSKV-----YNFSSGRGPP*AVA-WLVATPPRPVLYALATAV 397
NYNNN Y K+L +I + ++ G PP + W+ P +
Sbjct: 333 NYNNNNNYNKKLYYNINYIEQIPVPVPVPIYCGNFPPRPMGPWISIQEQIPRF----RYI 388
Query: 396 GPPGPLRPYLP 364
GPP P ++P
Sbjct: 389 GPPTPFPRFIP 399
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 22.6 bits (46), Expect = 3.2
Identities = 7/12 (58%), Positives = 10/12 (83%)
Frame = -2
Query: 564 QKNYNNNIFYTK 529
+ NYN+N FY+K
Sbjct: 135 ENNYNDNYFYSK 146
>AY263366-1|AAO92605.1| 139|Apis mellifera octopamine receptor
protein.
Length = 139
Score = 22.2 bits (45), Expect = 4.2
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +3
Query: 387 PEARPQLPTHTAQVEEASPQATPPPTV 467
P Q+P A ++++ P + PTV
Sbjct: 106 PSYSMQVPQQGASIDDSDPDPSSEPTV 132
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 22.2 bits (45), Expect = 4.2
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -3
Query: 323 GWCEVIFFLVFLKRPLRL 270
GW ++ +L+F PLRL
Sbjct: 134 GWLLLMLYLLFATLPLRL 151
>AJ547798-1|CAD67999.1| 587|Apis mellifera octopamine receptor
protein.
Length = 587
Score = 22.2 bits (45), Expect = 4.2
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = +3
Query: 387 PEARPQLPTHTAQVEEASPQATPPPTV 467
P Q+P A ++++ P + PTV
Sbjct: 554 PSYSMQVPQQGASIDDSDPDPSSEPTV 580
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 21.0 bits (42), Expect = 9.6
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +1
Query: 13 QTLADTSYVPQQENEVYYP 69
QT++ T+ V Q+E E Y P
Sbjct: 342 QTVSTTADVLQEEEEEYSP 360
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.0 bits (42), Expect = 9.6
Identities = 8/15 (53%), Positives = 10/15 (66%)
Frame = +1
Query: 37 VPQQENEVYYPQQPE 81
VP + NE+YY PE
Sbjct: 202 VPGKRNEIYYNCCPE 216
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.0 bits (42), Expect = 9.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +3
Query: 339 AFFPMFFGWGGRAAV 383
AF P++FG G A+
Sbjct: 863 AFVPLYFGTGNNVAL 877
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,776
Number of Sequences: 438
Number of extensions: 4556
Number of successful extensions: 15
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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