Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00626
         (734 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr...    24   5.6  
AJ419878-1|CAD12038.1|   77|Anopheles gambiae Sec61 protein prot...    23   7.4  
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    23   9.8  
AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic acetylch...    23   9.8  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    23   9.8  

>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
           protease protein.
          Length = 1322

 Score = 23.8 bits (49), Expect = 5.6
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 296 LEMQPLSTWYLPSLYV*SP 352
           LE  PL++W LP  YV  P
Sbjct: 632 LEPVPLASWQLPPPYVTEP 650


>AJ419878-1|CAD12038.1|   77|Anopheles gambiae Sec61 protein
           protein.
          Length = 77

 Score = 23.4 bits (48), Expect = 7.4
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +3

Query: 552 RKVFRRKKGLQNSFLFYIFYKACNVTLF 635
           RK+  R+K L  +   +IF   C + LF
Sbjct: 24  RKIQFREKVLWTAITLFIFLVCCQIPLF 51


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 13/29 (44%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +3

Query: 462 H*SCRKGHQGQEVARALTAQFFIQL-RYF 545
           H  CR+G   +  AR  TA FF+ L R+F
Sbjct: 400 HIHCRRGLTIETGARCSTAAFFLFLARWF 428


>AY705403-1|AAU12512.1|  520|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 8 protein.
          Length = 520

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 14/56 (25%), Positives = 26/56 (46%)
 Frame = +2

Query: 170 SNGYTPVLDCHTAHIACKFAEIKEKVDRLLVNLLKSTQNPSSLEMQPLSTWYLPSL 337
           SNGYT  ++   +    +F E  +  D + VNL   +    ++  + LS   L ++
Sbjct: 376 SNGYTNEIEMSVSDFPGEFKEGGDSFDNIGVNLSHGSVEAENVIPKQLSPEVLSAI 431


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 23.0 bits (47), Expect = 9.8
 Identities = 10/29 (34%), Positives = 12/29 (41%)
 Frame = -1

Query: 440 LKLTALMTPTATVCLMSRTAKRPRGGNSW 354
           L L  +    A VCLM      PR   +W
Sbjct: 17  LALNTMRVERADVCLMVELHSVPRNNGNW 45


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 758,885
Number of Sequences: 2352
Number of extensions: 15730
Number of successful extensions: 61
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)