Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00622
(762 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 155 2e-38
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 155 2e-38
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 155 2e-38
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 155 2e-38
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 95 5e-20
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 93 2e-19
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 70 1e-12
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 68 8e-12
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 39 0.004
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 39 0.004
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 36 0.039
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 36 0.039
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 35 0.051
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 35 0.051
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 33 0.16
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 33 0.16
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 33 0.21
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 33 0.21
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 33 0.21
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 33 0.27
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 33 0.27
At5g64600.1 68418.m08118 expressed protein similar to axi 1 [Nic... 30 1.9
At5g13650.2 68418.m01585 elongation factor family protein contai... 30 1.9
At5g13650.1 68418.m01584 elongation factor family protein contai... 30 1.9
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 1.9
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 1.9
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 30 1.9
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 2.6
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 29 2.6
At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha s... 29 3.4
At1g47840.1 68414.m05325 hexokinase, putative similar to hexokin... 29 4.5
At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containi... 28 5.9
At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein s... 28 5.9
At3g18370.1 68416.m02336 C2 domain-containing protein contains P... 28 5.9
At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5) M... 28 7.8
At1g78850.1 68414.m09191 curculin-like (mannose-binding) lectin ... 28 7.8
At1g17220.1 68414.m02098 translation initiation factor IF-2, chl... 28 7.8
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 155 bits (377), Expect = 2e-38
Identities = 72/82 (87%), Positives = 78/82 (95%)
Frame = +2
Query: 257 ERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 436
ERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGI
Sbjct: 68 ERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGI 127
Query: 437 SKNGQTREHALLAFTLGVKQLI 502
SK+GQTREHALLAFTLGVKQ+I
Sbjct: 128 SKDGQTREHALLAFTLGVKQMI 149
Score = 126 bits (303), Expect = 2e-29
Identities = 59/66 (89%), Positives = 60/66 (90%)
Frame = +3
Query: 57 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 236
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 237 DKLKAE 254
DKLKAE
Sbjct: 61 DKLKAE 66
Score = 94.3 bits (224), Expect = 8e-20
Identities = 39/61 (63%), Positives = 50/61 (81%)
Frame = +1
Query: 511 NKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFK 690
NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K
Sbjct: 153 NKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK 212
Query: 691 G 693
G
Sbjct: 213 G 213
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 155 bits (377), Expect = 2e-38
Identities = 72/82 (87%), Positives = 78/82 (95%)
Frame = +2
Query: 257 ERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 436
ERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGI
Sbjct: 68 ERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGI 127
Query: 437 SKNGQTREHALLAFTLGVKQLI 502
SK+GQTREHALLAFTLGVKQ+I
Sbjct: 128 SKDGQTREHALLAFTLGVKQMI 149
Score = 126 bits (303), Expect = 2e-29
Identities = 59/66 (89%), Positives = 60/66 (90%)
Frame = +3
Query: 57 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 236
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 237 DKLKAE 254
DKLKAE
Sbjct: 61 DKLKAE 66
Score = 94.3 bits (224), Expect = 8e-20
Identities = 39/61 (63%), Positives = 50/61 (81%)
Frame = +1
Query: 511 NKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFK 690
NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K
Sbjct: 153 NKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK 212
Query: 691 G 693
G
Sbjct: 213 G 213
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 155 bits (377), Expect = 2e-38
Identities = 72/82 (87%), Positives = 78/82 (95%)
Frame = +2
Query: 257 ERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 436
ERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGI
Sbjct: 68 ERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGI 127
Query: 437 SKNGQTREHALLAFTLGVKQLI 502
SK+GQTREHALLAFTLGVKQ+I
Sbjct: 128 SKDGQTREHALLAFTLGVKQMI 149
Score = 126 bits (303), Expect = 2e-29
Identities = 59/66 (89%), Positives = 60/66 (90%)
Frame = +3
Query: 57 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 236
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 237 DKLKAE 254
DKLKAE
Sbjct: 61 DKLKAE 66
Score = 94.3 bits (224), Expect = 8e-20
Identities = 39/61 (63%), Positives = 50/61 (81%)
Frame = +1
Query: 511 NKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFK 690
NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K
Sbjct: 153 NKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK 212
Query: 691 G 693
G
Sbjct: 213 G 213
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 155 bits (377), Expect = 2e-38
Identities = 72/82 (87%), Positives = 78/82 (95%)
Frame = +2
Query: 257 ERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 436
ERGITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAGI
Sbjct: 68 ERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGI 127
Query: 437 SKNGQTREHALLAFTLGVKQLI 502
SK+GQTREHALLAFTLGVKQ+I
Sbjct: 128 SKDGQTREHALLAFTLGVKQMI 149
Score = 126 bits (303), Expect = 2e-29
Identities = 59/66 (89%), Positives = 60/66 (90%)
Frame = +3
Query: 57 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 236
MGKEK HINIVVIGHVDSGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVL
Sbjct: 1 MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60
Query: 237 DKLKAE 254
DKLKAE
Sbjct: 61 DKLKAE 66
Score = 94.3 bits (224), Expect = 8e-20
Identities = 39/61 (63%), Positives = 50/61 (81%)
Frame = +1
Query: 511 NKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFK 690
NKMD+T P YS+ R++EI KEVSSY+KK+GYNP + FVPISG+ GDNM+E ST + W+K
Sbjct: 153 NKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGFEGDNMIERSTNLDWYK 212
Query: 691 G 693
G
Sbjct: 213 G 213
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 95.1 bits (226), Expect = 5e-20
Identities = 43/82 (52%), Positives = 57/82 (69%)
Frame = +2
Query: 260 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 439
+G T+++ FET TI+DAPGH+ ++ NMI+G SQAD VL+++A GEFE G
Sbjct: 163 KGKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETGYE 222
Query: 440 KNGQTREHALLAFTLGVKQLIV 505
+ GQTREH LA TLGV +LIV
Sbjct: 223 RGGQTREHVQLAKTLGVSKLIV 244
Score = 66.1 bits (154), Expect = 2e-11
Identities = 27/63 (42%), Positives = 45/63 (71%)
Frame = +3
Query: 66 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 245
+K H+N+V IGHVD+GKST G +++ G +D R I+K+EKEA++ + S+ A+++D
Sbjct: 98 KKRHLNVVFIGHVDAGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTN 157
Query: 246 KAE 254
+ E
Sbjct: 158 EEE 160
Score = 46.8 bits (106), Expect = 2e-05
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Frame = +1
Query: 508 INKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHGDNMLEPSTK--M 678
+NKMD +S+ R++EI++++ ++K GYN V F+PISG G NM + +
Sbjct: 246 VNKMDDPTVNWSKERYDEIEQKMVPFLKASGYNTKKDVVFLPISGLMGKNMDQRMGQEIC 305
Query: 679 PWFKG 693
PW+ G
Sbjct: 306 PWWSG 310
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 93.1 bits (221), Expect = 2e-19
Identities = 42/88 (47%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
Frame = +2
Query: 257 ERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 436
ERGIT+ +A+ F + +++V ++D+PGH+DF+ NMI G +QAD A+L++ A G FEAG
Sbjct: 300 ERGITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEAGF 359
Query: 437 SK-NGQTREHALLAFTLGVKQLIVG*TK 517
GQTREHA + GV+Q+IV K
Sbjct: 360 DNLKGQTREHARVLRGFGVEQVIVAINK 387
Score = 73.3 bits (172), Expect = 2e-13
Identities = 30/61 (49%), Positives = 44/61 (72%)
Frame = +3
Query: 72 THINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 251
+ +N+ ++GHVDSGKST +G L++ G I ++ + K+EKEA+ GKGSF YAW LD+
Sbjct: 238 SQLNLAIVGHVDSGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAE 297
Query: 252 E 254
E
Sbjct: 298 E 298
Score = 39.1 bits (87), Expect = 0.003
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Frame = +1
Query: 508 INKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNML-EPSTKMPW 684
INKMD YS+ RF+ IK+ V S+++ + +++ ++P+S N++ PS
Sbjct: 385 INKMDIVG--YSKERFDLIKQHVGSFLQSCRFKDSSLTWIPLSAMENQNLVAAPSDNR-- 440
Query: 685 FKGWQVERKEGKADGKCLIEALDAI 759
W G CL++A+D++
Sbjct: 441 LSSWY--------QGPCLLDAVDSV 457
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 70.1 bits (164), Expect = 1e-12
Identities = 35/82 (42%), Positives = 50/82 (60%)
Frame = +2
Query: 260 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 439
RGITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+V+ G
Sbjct: 126 RGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP---- 181
Query: 440 KNGQTREHALLAFTLGVKQLIV 505
QT+EH LLA +GV ++V
Sbjct: 182 ---QTKEHILLAKQVGVPDMVV 200
Score = 39.1 bits (87), Expect = 0.003
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +3
Query: 54 KMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEK 188
K ++K H+NI IGHVD GK+T T L I +K+++
Sbjct: 72 KFERKKPHVNIGTIGHVDHGKTTLTAALTMALASIGSSVAKKYDE 116
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 67.7 bits (158), Expect = 8e-12
Identities = 35/82 (42%), Positives = 50/82 (60%)
Frame = +2
Query: 257 ERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 436
+RGITI A ++ET+K + +D PGH D++KNMITG +Q D +L+V+ G
Sbjct: 113 KRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP--- 169
Query: 437 SKNGQTREHALLAFTLGVKQLI 502
QT+EH LLA +GV L+
Sbjct: 170 ----QTKEHILLARQVGVPSLV 187
Score = 32.7 bits (71), Expect = 0.27
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 63 KEKTHINIVVIGHVDSGKSTTT 128
+ K H+N+ IGHVD GK+T T
Sbjct: 63 RNKPHVNVGTIGHVDHGKTTLT 84
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 38.7 bits (86), Expect = 0.004
Identities = 28/92 (30%), Positives = 39/92 (42%)
Frame = +2
Query: 257 ERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 436
E+GITI A Y V IID PGH DF + D A+L++ + G I
Sbjct: 116 EKGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSI 175
Query: 437 SKNGQTREHALLAFTLGVKQLIVG*TKWIPLN 532
+ + Q R + + K +G W LN
Sbjct: 176 TVDRQMRRYEVPRVAFINKLDRMGADPWKVLN 207
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 81 NIVVIGHVDSGKSTTTGHLIYKCGGI 158
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 38.7 bits (86), Expect = 0.004
Identities = 28/92 (30%), Positives = 39/92 (42%)
Frame = +2
Query: 257 ERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGI 436
E+GITI A Y V IID PGH DF + D A+L++ + G I
Sbjct: 116 EKGITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSI 175
Query: 437 SKNGQTREHALLAFTLGVKQLIVG*TKWIPLN 532
+ + Q R + + K +G W LN
Sbjct: 176 TVDRQMRRYEVPRVAFINKLDRMGADPWKVLN 207
Score = 27.9 bits (59), Expect = 7.8
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +3
Query: 81 NIVVIGHVDSGKSTTTGHLIYKCGGI 158
NI + H+DSGK+T T +++ G I
Sbjct: 67 NIGISAHIDSGKTTLTERVLFYTGRI 92
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 35.5 bits (78), Expect = 0.039
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +2
Query: 260 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 418
+ + + + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 193 KAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 35.5 bits (78), Expect = 0.039
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +2
Query: 260 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 418
+ + + + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 193 KAVPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 35.1 bits (77), Expect = 0.051
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Frame = +2
Query: 257 ERGITIDIAL----WKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 418
ERGITI + + +E + + + +ID PGH DF + + + A+L+V A G
Sbjct: 131 ERGITIKLQAARMRYVYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG 188
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 81 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEK 179
N +I H+D GKST L+ G + R +++
Sbjct: 88 NFSIIAHIDHGKSTLADKLLQVTGTVQNRDMKE 120
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 35.1 bits (77), Expect = 0.051
Identities = 17/53 (32%), Positives = 28/53 (52%)
Frame = +2
Query: 260 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 418
R IT+ + + Y + +ID+PGH DF + T +D A+++V A G
Sbjct: 58 RAITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
Score = 32.7 bits (71), Expect = 0.27
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +3
Query: 81 NIVVIGHVDSGKSTTTGHLIYKCGG 155
NI ++ HVD GK+T HLI GG
Sbjct: 11 NICILAHVDHGKTTLADHLIASSGG 35
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +2
Query: 299 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 478
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 479 TLGVKQLIV 505
+ +K +I+
Sbjct: 178 MMRLKHIII 186
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 33.5 bits (73), Expect = 0.16
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +2
Query: 299 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAF 478
T + +V+ +D PGH + M+ G + D A+L++AA QT EH
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAANES------CPQPQTAEHLASVD 177
Query: 479 TLGVKQLIV 505
+ +K +I+
Sbjct: 178 MMRLKHIII 186
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 33.1 bits (72), Expect = 0.21
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +2
Query: 296 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 418
E S Y + +ID PGH DF + S A+L+V A G
Sbjct: 131 EASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG 171
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +3
Query: 45 D*PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDK 164
D K EK N +I H+D GKST L+ G I K
Sbjct: 57 DLTKFPSEKIR-NFSIIAHIDHGKSTLADRLMELTGTIKK 95
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 33.1 bits (72), Expect = 0.21
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +2
Query: 257 ERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 418
ERGITI A K+ + IID PGH DF + D A+ + + G
Sbjct: 144 ERGITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSVAG 197
Score = 32.7 bits (71), Expect = 0.27
Identities = 12/28 (42%), Positives = 20/28 (71%)
Frame = +3
Query: 69 KTHINIVVIGHVDSGKSTTTGHLIYKCG 152
K + NI ++ H+D+GK+TTT ++Y G
Sbjct: 94 KDYRNIGIMAHIDAGKTTTTERILYYTG 121
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 33.1 bits (72), Expect = 0.21
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = +2
Query: 293 FETSKY----YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTRE 460
FE SK +V+ +D PGH + M+ G + D A+L++AA QT E
Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAANE------TCPQPQTSE 165
Query: 461 HALLAFTLGVKQLIV 505
H + +K +I+
Sbjct: 166 HLAAVEIMQLKHIII 180
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 32.7 bits (71), Expect = 0.27
Identities = 14/35 (40%), Positives = 19/35 (54%)
Frame = +2
Query: 314 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 418
+T +D PGH F + G + D VL+VAA G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 32.7 bits (71), Expect = 0.27
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +2
Query: 311 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 490
+V+ +D PGH + M+ G + D A+LI+AA QT EH + +
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAANE------TCPQPQTAEHLASVDMMHL 173
Query: 491 KQLIV 505
K +I+
Sbjct: 174 KDIII 178
>At5g64600.1 68418.m08118 expressed protein similar to axi 1
[Nicotiana tabacum] GI:559921; contains Pfam profile
PF03138: Plant protein family
Length = 522
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +1
Query: 484 RCQTAHRRINKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHG--DNM 657
R T+H +I ++STE E KEV ++K +GY+ + V ++ +G D +
Sbjct: 313 RESTSHWKIKSINSTEQR-EEGLCPLTPKEVGIFLKGLGYSQSTVIYIAAGEIYGGDDRL 371
Query: 658 LEPSTKMP 681
E ++ P
Sbjct: 372 SELKSRFP 379
>At5g13650.2 68418.m01585 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 676
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = +2
Query: 257 ERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 418
ERGITI V IID PGH DF + + D +L+V + G
Sbjct: 129 ERGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEG 182
>At5g13650.1 68418.m01584 elongation factor family protein contains
Pfam profiles: PF00009 elongation factor Tu GTP binding
domain,PF00679 elongation factor G C-terminus, PF03144
elongation factor Tu domain 2
Length = 675
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = +2
Query: 257 ERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 418
ERGITI V IID PGH DF + + D +L+V + G
Sbjct: 128 ERGITILSKNTSITYKNTKVNIIDTPGHSDFGGEVERVLNMVDGVLLVVDSVEG 181
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 320 IIDAPGHRDFIKNMITGTSQADCAVLIV 403
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 320 IIDAPGHRDFIKNMITGTSQADCAVLIV 403
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 320 IIDAPGHRDFIKNMITGTSQADCAVLIV 403
+ID PGH F G+S D A+L+V
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV 732
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +2
Query: 302 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 403
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 81 NIVVIGHVDSGKSTTTGHLIYKCG 152
N+ VI HVD GKST T L+ G
Sbjct: 21 NMSVIAHVDHGKSTLTDSLVAAAG 44
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 29.5 bits (63), Expect = 2.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 314 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 403
+ +ID PGH F G++ D A+L+V
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV 587
>At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha
subunit, chloroplast / 60 kDa chaperonin alpha subunit /
CPN-60 alpha identical to SWISS-PROT:P21238- RuBisCO
subunit binding-protein alpha subunit, chloroplast
precursor (60 kDa chaperonin alpha subunit, CPN-60
alpha) [Arabidopsis thaliana]
Length = 586
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/58 (25%), Positives = 29/58 (50%)
Frame = -3
Query: 406 SYDEHSAISLRGSCDHVLDEISVSRSINDGNIVLASFELPESNIDCDTTLTSAFSLSN 233
++D+HS +L+ D + D + ++ N+VL F P+ ++ T+ A L N
Sbjct: 52 AFDQHSRAALQAGIDKLADCVGLTLGPRGRNVVLDEFGSPKV-VNDGVTIARAIELPN 108
>At1g47840.1 68414.m05325 hexokinase, putative similar to hexokinase
1 [Arabidopsis thaliana] Swiss-Prot:Q42525
Length = 493
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 658 LEPSTKMPWFKGWQVERKEGKADGKCLIEALDA 756
++ T W KG++V EGK CL EA++A
Sbjct: 189 IDSGTLSKWTKGFKVSGMEGKNVVACLNEAMEA 221
>At3g43240.1 68416.m04564 ARID/BRIGHT DNA-binding domain-containing
protein contains Pfam profile PF01388: ARID/BRIGHT DNA
binding domain
Length = 747
Score = 28.3 bits (60), Expect = 5.9
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +3
Query: 594 DWLQPSCCRFRAHFWMARRQHVGAFNQNALVQGM 695
DW+ C AHF RR +GAF A G+
Sbjct: 687 DWVNCGSCGEWAHFGCDRRPGLGAFKDYAKTDGL 720
>At3g20440.1 68416.m02588 glycoside hydrolase family 13 protein
similar to 1,4-alpha-glucan branching enzyme [Solanum
tuberosum] GI:1621012, 1,4-alpha-glucan branching enzyme
(EC 2.4.1.18) from [Homo sapiens] SP|Q04446, {Solanum
tuberosum} SP|P30924; contains Pfam profiles: PF00128
Alpha amylase catalytic domain, PF02922 Isoamylase
N-terminal domain
Length = 777
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/33 (42%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Frame = +1
Query: 541 SEPR---FEEIKKEVSSYIKKIGYNPAAVAFVP 630
SEP+ FEE K+V ++K+ GYN + VP
Sbjct: 257 SEPKVSTFEEFTKKVLPHVKRAGYNAIQLIGVP 289
>At3g18370.1 68416.m02336 C2 domain-containing protein contains Pfam
profile: PF00168 C2 domain
Length = 815
Score = 28.3 bits (60), Expect = 5.9
Identities = 24/68 (35%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
Frame = +2
Query: 566 RRKYPHTSRRLATTQLLSLS---CPFLDGTETTCWSLQPKCLGSR-DGRWSVKKAKLTEN 733
+R SR + QLL S CP L G TCWS + R D W +
Sbjct: 127 KRLRQRRSRLIENIQLLEFSLGSCPPLLGLHGTCWSKSGEQKIMRLDFNWDTTDLSILLQ 186
Query: 734 ASLKLSMP 757
A KLSMP
Sbjct: 187 A--KLSMP 192
>At5g51710.1 68418.m06413 K+ efflux antiporter, putative (KEA5)
Monovalent cation:proton antiporter family 2 (CPA2
family) member, PMID:11500563; related to
glutathione-regulated potassium-efflux system protein
[Escherichia coli] GP|606284|gb|AAA58147
Length = 568
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 547 PRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNM 657
PRF ++ ++SS ++ Y AAVAF +S W D +
Sbjct: 354 PRFLKLMIQLSSQTNEL-YQLAAVAFCLLSAWCSDKL 389
>At1g78850.1 68414.m09191 curculin-like (mannose-binding) lectin
family protein low similarity to ser/thr protein kinase
from Zea mays [GI:2598067]; contains Pfam lectin
(probable mannose binding) domain PF01453
Length = 441
Score = 27.9 bits (59), Expect = 7.8
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
Frame = +3
Query: 129 GHLIYKCGGIDKRT--IEKFEKEAQEMGKGSFKYAWVLDKLKAEVSVVSQSILLSGSSKL 302
G L+++ +K I+ E + S K+ W + +V QS+ L+G +KL
Sbjct: 120 GRLVWQTNTANKGAVGIKILENGNMVIYDSSGKFVWQSFDSPTDTLLVGQSLKLNGRTKL 179
Query: 303 ASTMLPSL 326
S + PS+
Sbjct: 180 VSRLSPSV 187
>At1g17220.1 68414.m02098 translation initiation factor IF-2,
chloroplast, putative similar to SP|P57997|IF2C_PHAVU
Translation initiation factor IF-2, chloroplast
precursor (PvIF2cp) {Phaseolus vulgaris}
Length = 1026
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +2
Query: 323 IDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 418
+D PGH F G D A+++VAA G
Sbjct: 557 LDTPGHEAFGAMRARGARVTDIAIIVVAADDG 588
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,378,132
Number of Sequences: 28952
Number of extensions: 382438
Number of successful extensions: 1238
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1234
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1702303248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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