Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00621
(675 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 41 3e-05
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren... 26 0.95
DQ230894-1|ABD94313.1| 315|Anopheles gambiae zinc finger protei... 26 1.3
DQ230893-1|ABD94311.1| 315|Anopheles gambiae zinc finger protei... 26 1.3
AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein. 26 1.3
AY324315-1|AAQ89700.1| 153|Anopheles gambiae insulin-like pepti... 25 2.9
AY324314-1|AAQ89699.1| 153|Anopheles gambiae insulin-like pepti... 25 2.9
AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox prote... 24 5.0
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ... 23 8.8
AY324307-1|AAQ89692.1| 154|Anopheles gambiae insulin-like pepti... 23 8.8
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 41.1 bits (92), Expect = 3e-05
Identities = 16/29 (55%), Positives = 19/29 (65%)
Frame = +1
Query: 514 SALQIHMRTHTGDKPFRCAVCQKAFTTKG 600
++LQ H+ THTG KP RC C FTT G
Sbjct: 168 ASLQNHVNTHTGTKPHRCKHCDNCFTTSG 196
Score = 40.7 bits (91), Expect = 4e-05
Identities = 15/28 (53%), Positives = 21/28 (75%)
Frame = +2
Query: 32 LEIHYRSHTKERPFKCTVCERGFSTKSS 115
L H ++H+++RP KC VCERGF T +S
Sbjct: 142 LSRHLKTHSEDRPHKCVVCERGFKTLAS 169
Score = 36.3 bits (80), Expect = 9e-04
Identities = 15/28 (53%), Positives = 19/28 (67%)
Frame = +1
Query: 514 SALQIHMRTHTGDKPFRCAVCQKAFTTK 597
S L+ H+RTHTG+KPF+C C A K
Sbjct: 225 SKLKRHIRTHTGEKPFQCPHCTYASPDK 252
Score = 35.5 bits (78), Expect = 0.002
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +1
Query: 529 HMRTHTGDKPFRCAVCQKAFT 591
HMR HTG+KP+ C VC FT
Sbjct: 258 HMRIHTGEKPYSCDVCFARFT 278
Score = 35.1 bits (77), Expect = 0.002
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +1
Query: 520 LQIHMRTHTGDKPFRCAVCQKAFTT 594
L H++TH+ D+P +C VC++ F T
Sbjct: 142 LSRHLKTHSEDRPHKCVVCERGFKT 166
Score = 31.5 bits (68), Expect = 0.025
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 493 PQELLSSSALQIHMRTHTGDKPFRCAVCQKAFTTK 597
P +S L+ H+ HT KP++C C + F K
Sbjct: 361 PYASISMRHLESHLLLHTDQKPYKCDQCAQTFRQK 395
Score = 29.9 bits (64), Expect = 0.077
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +2
Query: 26 SALEIHYRSHTKERPFKCTVC 88
S L+ H R+HT E+PF+C C
Sbjct: 225 SKLKRHIRTHTGEKPFQCPHC 245
Score = 29.9 bits (64), Expect = 0.077
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +2
Query: 41 HYRSHTKERPFKCTVCERGFSTKSS 115
H R HT E+P+ C VC F+ +S
Sbjct: 258 HMRIHTGEKPYSCDVCFARFTQSNS 282
Score = 29.5 bits (63), Expect = 0.10
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 32 LEIHYRSHTKERPFKCTVCERGFSTK 109
LE H HT ++P+KC C + F K
Sbjct: 370 LESHLLLHTDQKPYKCDQCAQTFRQK 395
Score = 28.7 bits (61), Expect = 0.18
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +2
Query: 38 IHYRSHTKERPFKCTVCE 91
I YR HT ERP KCT C+
Sbjct: 202 IRYR-HTHERPHKCTECD 218
Score = 28.7 bits (61), Expect = 0.18
Identities = 11/24 (45%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Frame = +1
Query: 520 LQIHMRT-HTGDKPFRCAVCQKAF 588
L+IH++ HT DKP +C C F
Sbjct: 313 LRIHVQNLHTADKPIKCKRCDSTF 336
Score = 27.9 bits (59), Expect = 0.31
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +2
Query: 14 FACNSALEIHYRSHTKERPFKCTVCERGFST 106
F ++L+ H +HT +P +C C+ F+T
Sbjct: 164 FKTLASLQNHVNTHTGTKPHRCKHCDNCFTT 194
Score = 27.5 bits (58), Expect = 0.41
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 523 QIHMRTHTGDKPFRCAVCQKA 585
++H +TH G+K +RC C A
Sbjct: 343 KMHAKTHEGEKCYRCEYCPYA 363
Score = 26.2 bits (55), Expect = 0.95
Identities = 11/29 (37%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +2
Query: 32 LEIHYRS-HTKERPFKCTVCERGFSTKSS 115
L IH ++ HT ++P KC C+ F + S
Sbjct: 313 LRIHVQNLHTADKPIKCKRCDSTFPDRYS 341
>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
methoprene-tolerant protein protein.
Length = 1115
Score = 26.2 bits (55), Expect = 0.95
Identities = 24/91 (26%), Positives = 36/91 (39%), Gaps = 10/91 (10%)
Frame = +3
Query: 231 AQDPRHAAGFDKN-----VVGAPSSEDGRDQSPERRSPEKLDLKR-----SPPVTCHRLX 380
+ + RH+ G+ N G G S R P +L + SPPV ++L
Sbjct: 105 SDEARHSGGYLANPYYGATAGGGGGGYGHQGSMMRAMPPELGMYGGGCYGSPPVPWYQLP 164
Query: 381 TTHHPSTCRLYRNGPVFRVVRHIHHRSKHHP 473
PS+ ++ P +H HH HHP
Sbjct: 165 QQQQPSSYHQQQH-PGHS--QHHHHHHHHHP 192
>DQ230894-1|ABD94313.1| 315|Anopheles gambiae zinc finger protein
183 protein.
Length = 315
Score = 25.8 bits (54), Expect = 1.3
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +2
Query: 35 EIHYRSHTKERPFKCTVCERGF 100
EIH S +E PFKC VC F
Sbjct: 235 EIH--SDDEELPFKCYVCRESF 254
Score = 23.8 bits (49), Expect = 5.0
Identities = 9/26 (34%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = +1
Query: 541 HTGDK--PFRCAVCQKAFTTKGNSRC 612
H+ D+ PF+C VC+++F ++C
Sbjct: 237 HSDDEELPFKCYVCRESFVDPIVTKC 262
>DQ230893-1|ABD94311.1| 315|Anopheles gambiae zinc finger protein
183 protein.
Length = 315
Score = 25.8 bits (54), Expect = 1.3
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +2
Query: 35 EIHYRSHTKERPFKCTVCERGF 100
EIH S +E PFKC VC F
Sbjct: 235 EIH--SDDEELPFKCYVCRESF 254
Score = 23.8 bits (49), Expect = 5.0
Identities = 9/26 (34%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Frame = +1
Query: 541 HTGDK--PFRCAVCQKAFTTKGNSRC 612
H+ D+ PF+C VC+++F ++C
Sbjct: 237 HSDDEELPFKCYVCRESFVDPIVTKC 262
>AY578799-1|AAT07304.1| 679|Anopheles gambiae brinker protein.
Length = 679
Score = 25.8 bits (54), Expect = 1.3
Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +3
Query: 354 PPVTCHRLXTTHHPSTCRL-YRNGPVFRVVRHIHHRSKHHPSI 479
P V H + HHP+ L Y+ + H HH HHP +
Sbjct: 129 PHVQQHH-PSVHHPAHHPLHYQPAAAAAMHHHHHHPHHHHPGL 170
>AY324315-1|AAQ89700.1| 153|Anopheles gambiae insulin-like peptide
7 precursor protein.
Length = 153
Score = 24.6 bits (51), Expect = 2.9
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 592 TKGNSRCIWALTCGAAALLVAV 657
TKG+ + ++CGAA LL+ V
Sbjct: 3 TKGSRHLLLVVSCGAALLLLLV 24
>AY324314-1|AAQ89699.1| 153|Anopheles gambiae insulin-like peptide
7 precursor protein.
Length = 153
Score = 24.6 bits (51), Expect = 2.9
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 592 TKGNSRCIWALTCGAAALLVAV 657
TKG+ + ++CGAA LL+ V
Sbjct: 3 TKGSRHLLLVVSCGAALLLLLV 24
>AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox protein
protein.
Length = 338
Score = 23.8 bits (49), Expect = 5.0
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = -2
Query: 674 LQRHSPTATRSAAAPHVSAHMHLELPFVVNAFWQTAHLKGLSP 546
LQ+H P+ AA PH + P V FWQ LSP
Sbjct: 69 LQQHPPSVFPHAALPHTPTNQ----PIV--PFWQADLKPELSP 105
>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
gambiae RT2 retroposon. ).
Length = 1222
Score = 23.0 bits (47), Expect = 8.8
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 290 RGWAGSESRTAVARKTGPETLSACHVPPPXN 382
R W SE++ VA + G +C+ PP N
Sbjct: 79 RVWC-SEAQGLVAAQIGGVVFISCYAPPSLN 108
>AY324307-1|AAQ89692.1| 154|Anopheles gambiae insulin-like peptide
1 precursor protein.
Length = 154
Score = 23.0 bits (47), Expect = 8.8
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 592 TKGNSRCIWALTCGAAALLVAV 657
TKG+ + ++CG A LL+ V
Sbjct: 3 TKGSRHLLLVVSCGTALLLLLV 24
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 764,579
Number of Sequences: 2352
Number of extensions: 15801
Number of successful extensions: 67
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67741110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -