Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00620
         (631 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    23   1.6  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    23   1.6  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    21   6.4  
AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain tran...    21   6.4  
AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.          21   6.4  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    21   8.5  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   8.5  

>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +3

Query: 330 HADYLKNEASSKSEFLALCKQLGIQGEKIKRE 425
           H D L N  +S     A+CK +G+   +I R+
Sbjct: 14  HHDTLHNIYTSMKPVYAICKLIGLNTLRIGRK 45


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +3

Query: 330 HADYLKNEASSKSEFLALCKQLGIQGEKIKRE 425
           H D L N  +S     A+CK +G+   +I R+
Sbjct: 14  HHDTLHNIYTSMKPVYAICKLIGLNTLRIGRK 45


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 10/35 (28%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
 Frame = +1

Query: 121 ETEADTKNLFGRYGSQXMKDW-QDVERNYEKENLY 222
           ET+ +      R+     +DW  ++E  Y+KE  Y
Sbjct: 80  ETQKNGSKKIMRHLIDHKRDWWNELEEKYDKEGEY 114


>AF452568-1|AAL57830.1|  243|Tribolium castaneum homeodomain
           transcription factor Zen2 protein.
          Length = 243

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +3

Query: 234 STDAGQEISYEIPGLKRQIAKEEQAQADFEKKH 332
           S  A Q +  + PG  + + K+E  Q D E  +
Sbjct: 172 SPKACQFLYNQFPGSSQVVVKDETCQYDTESSY 204


>AF321227-5|AAK16425.1|  292|Tribolium castaneum Zen2 protein.
          Length = 292

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +3

Query: 234 STDAGQEISYEIPGLKRQIAKEEQAQADFEKKH 332
           S  A Q +  + PG  + + K+E  Q D E  +
Sbjct: 192 SPKACQFLYNQFPGSSQVVVKDETCQYDTESSY 224


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 5/14 (35%), Positives = 10/14 (71%)
 Frame = +1

Query: 181 WQDVERNYEKENLY 222
           W ++E  Y+K+ +Y
Sbjct: 101 WNELEAKYDKDGVY 114


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 8.5
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -1

Query: 511 INSIPGWSGFSDFPIWSYI 455
           +NSIPG  G  D P  S +
Sbjct: 175 VNSIPGEVGGYDIPAMSNV 193


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,627
Number of Sequences: 336
Number of extensions: 2744
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16188355
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)