Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00617
(542 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head orthol... 25 0.32
EF222292-1|ABN79652.1| 354|Tribolium castaneum cardioactive pep... 23 2.3
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 7.0
EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine vasopre... 21 9.2
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 21 9.2
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 9.2
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 21 9.2
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 9.2
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 21 9.2
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 21 9.2
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 21 9.2
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 9.2
>AF217810-1|AAF71998.1| 431|Tribolium castaneum fork head
orthologue protein.
Length = 431
Score = 25.4 bits (53), Expect = 0.32
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = +3
Query: 180 DHSVLCCVHRHRASHRRCRQEPGGDNPNNTIFDAKRLI--GRKFEDATVQADMKHWPF 347
DH + +H + SH +QEP G +N F RL+ D + ADM + +
Sbjct: 342 DHQAM--LHHNPMSHH-LKQEPSGFTSSNHPFSINRLLPTAESKADIKMYADMHQYGY 396
>EF222292-1|ABN79652.1| 354|Tribolium castaneum cardioactive
peptide receptor 2 protein.
Length = 354
Score = 22.6 bits (46), Expect = 2.3
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 132 LPAREGGDHRQRPGQQDH 185
+P R+ DHR RP + H
Sbjct: 246 IPIRQCDDHRDRPPRHFH 263
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
protein.
Length = 2700
Score = 21.0 bits (42), Expect = 7.0
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 131 TPTQEYVVPRSIPT 90
TPT + VV R+IP+
Sbjct: 15 TPTDQRVVTRTIPS 28
>EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine
vasopressin receptor protein.
Length = 403
Score = 20.6 bits (41), Expect = 9.2
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = -1
Query: 503 VITAFCTVLPR*ASAVSFIF 444
+ITAF +VLP+ A +++ F
Sbjct: 87 LITAFLSVLPQLAWDITYRF 106
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 20.6 bits (41), Expect = 9.2
Identities = 12/45 (26%), Positives = 19/45 (42%)
Frame = +1
Query: 223 IGDAAKNQVAITPTTQYSMPNVSSDVSSKMLLCKPT*STGLSRXQ 357
+GD + Q +T PN + S+ T STG++ Q
Sbjct: 70 MGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQ 114
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 20.6 bits (41), Expect = 9.2
Identities = 12/45 (26%), Positives = 19/45 (42%)
Frame = +1
Query: 223 IGDAAKNQVAITPTTQYSMPNVSSDVSSKMLLCKPT*STGLSRXQ 357
+GD + Q +T PN + S+ T STG++ Q
Sbjct: 70 MGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQ 114
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 20.6 bits (41), Expect = 9.2
Identities = 12/45 (26%), Positives = 19/45 (42%)
Frame = +1
Query: 223 IGDAAKNQVAITPTTQYSMPNVSSDVSSKMLLCKPT*STGLSRXQ 357
+GD + Q +T PN + S+ T STG++ Q
Sbjct: 70 MGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQ 114
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 20.6 bits (41), Expect = 9.2
Identities = 12/45 (26%), Positives = 19/45 (42%)
Frame = +1
Query: 223 IGDAAKNQVAITPTTQYSMPNVSSDVSSKMLLCKPT*STGLSRXQ 357
+GD + Q +T PN + S+ T STG++ Q
Sbjct: 70 MGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQ 114
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 20.6 bits (41), Expect = 9.2
Identities = 12/45 (26%), Positives = 19/45 (42%)
Frame = +1
Query: 223 IGDAAKNQVAITPTTQYSMPNVSSDVSSKMLLCKPT*STGLSRXQ 357
+GD + Q +T PN + S+ T STG++ Q
Sbjct: 70 MGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQ 114
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 20.6 bits (41), Expect = 9.2
Identities = 12/45 (26%), Positives = 19/45 (42%)
Frame = +1
Query: 223 IGDAAKNQVAITPTTQYSMPNVSSDVSSKMLLCKPT*STGLSRXQ 357
+GD + Q +T PN + S+ T STG++ Q
Sbjct: 26 MGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQ 70
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 20.6 bits (41), Expect = 9.2
Identities = 12/45 (26%), Positives = 19/45 (42%)
Frame = +1
Query: 223 IGDAAKNQVAITPTTQYSMPNVSSDVSSKMLLCKPT*STGLSRXQ 357
+GD + Q +T PN + S+ T STG++ Q
Sbjct: 70 MGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQ 114
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 20.6 bits (41), Expect = 9.2
Identities = 12/45 (26%), Positives = 19/45 (42%)
Frame = +1
Query: 223 IGDAAKNQVAITPTTQYSMPNVSSDVSSKMLLCKPT*STGLSRXQ 357
+GD + Q +T PN + S+ T STG++ Q
Sbjct: 70 MGDYTQLQPQRLASTHLQSPNTQTHPSASCKYADSTSSTGVASPQ 114
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,803
Number of Sequences: 336
Number of extensions: 3165
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13306679
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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