Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00617
(542 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 137 1e-33
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 135 3e-33
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 135 3e-33
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 118 6e-28
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 95 6e-21
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 49 4e-07
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 40 3e-04
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 30 0.25
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 29 0.59
SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharo... 26 3.1
SPAC20G4.07c |sts1|erg4|C-24|Schizosaccharomyces pombe|chr 1|||M... 25 5.5
SPAC823.11 |||sphingosine-1-phosphate phosphatase |Schizosacchar... 25 5.5
SPCC74.09 |mug24||RNA-binding protein, rrm type|Schizosaccharomy... 25 5.5
SPAC23H3.08c |bub3||mitotic spindle checkpoint protein Bub3|Schi... 25 7.2
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 25 7.2
SPAC2F7.03c |pom1||DYRK family protein kinase Pom1|Schizosacchar... 25 7.2
SPBC24C6.03 |||proline-tRNA ligase |Schizosaccharomyces pombe|ch... 25 9.5
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 25 9.5
SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces... 25 9.5
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 137 bits (331), Expect = 1e-33
Identities = 78/142 (54%), Positives = 92/142 (64%), Gaps = 1/142 (0%)
Frame = +1
Query: 88 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAITP-T 264
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+ P
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 265 TQYSMPNVSSDVSSKMLLCKPT*STGLSRXQ*WRQT*DQGSI*G*RQTFFPEEVSSMVLT 444
T + + + + Q G +TF PEE+SSMVL
Sbjct: 64 TIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSMVLM 123
Query: 445 KMKETAEAYLGKTVQNAVITVP 510
KM+ETAEAYLG V +AV+TVP
Sbjct: 124 KMRETAEAYLGGKVTDAVVTVP 145
Score = 70.5 bits (165), Expect = 1e-13
Identities = 40/97 (41%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Frame = +3
Query: 255 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEXSVMEANLRSR*HIRVKTNLF-PRGSQF 431
NP+NTIFDAKRLIGRKF+D VQ+DMKHWPF+ + + + +T F P
Sbjct: 60 NPHNTIFDAKRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISS 119
Query: 432 HGAYENEGNCRSLSWQNCAECSNHGSAYFNDSQRQAT 542
+ + + AYFNDSQRQAT
Sbjct: 120 MVLMKMRETAEAYLGGKVTDAVVTVPAYFNDSQRQAT 156
Score = 32.3 bits (70), Expect = 0.048
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +2
Query: 344 FRGFSDGGKPKIKVAYKGEDKPFSPRK 424
F+ S GKP ++V YKGE K F+P +
Sbjct: 90 FKVISKDGKPVLQVEYKGETKTFTPEE 116
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 135 bits (327), Expect = 3e-33
Identities = 76/142 (53%), Positives = 94/142 (66%), Gaps = 1/142 (0%)
Frame = +1
Query: 88 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAITP-T 264
++GIDLGTTYSCVG F + +VEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA+ P
Sbjct: 4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHN 63
Query: 265 TQYSMPNVSSDVSSKMLLCKPT*STGLSRXQ*WRQT*DQGSI*G*RQTFFPEEVSSMVLT 444
T + + + + + + Q G +TF PEE+SSMVL
Sbjct: 64 TIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSMVLL 123
Query: 445 KMKETAEAYLGKTVQNAVITVP 510
KM+E+AEA+LG V +AV+TVP
Sbjct: 124 KMRESAEAFLGGKVTDAVVTVP 145
Score = 70.1 bits (164), Expect = 2e-13
Identities = 39/97 (40%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Frame = +3
Query: 255 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEXSVMEANLRSR*HIRVKTNLF-PRGSQF 431
NP+NTIFDAKRLIGR+F D VQ+DMKHWPF+ + + + +T F P
Sbjct: 60 NPHNTIFDAKRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISS 119
Query: 432 HGAYENEGNCRSLSWQNCAECSNHGSAYFNDSQRQAT 542
+ + + + AYFNDSQRQAT
Sbjct: 120 MVLLKMRESAEAFLGGKVTDAVVTVPAYFNDSQRQAT 156
Score = 29.9 bits (64), Expect = 0.25
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 344 FRGFSDGGKPKIKVAYKGEDKPFSPRK 424
F+ GKP I+V +KGE K F+P +
Sbjct: 90 FKVIEKDGKPLIQVEFKGETKTFTPEE 116
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 135 bits (327), Expect = 3e-33
Identities = 70/141 (49%), Positives = 95/141 (67%), Gaps = 1/141 (0%)
Frame = +1
Query: 91 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAITP-TT 267
+GIDLGTTYSCV V ++G+VEIIANDQGNR TPSYVAFT+ ERL+G+AAKNQ P T
Sbjct: 38 IGIDLGTTYSCVAVMKNGRVEIIANDQGNRITPSYVAFTEDERLVGEAAKNQAPSNPENT 97
Query: 268 QYSMPNVSSDVSSKMLLCKPT*STGLSRXQ*WRQT*DQGSI*G*RQTFFPEEVSSMVLTK 447
+ + + + + K S + + ++ G ++ F PEE+S+M+L+K
Sbjct: 98 IFDIKRLIGRKFDEKTMAKDIKSFPFHIVNDKNRPLVEVNVGGKKKKFTPEEISAMILSK 157
Query: 448 MKETAEAYLGKTVQNAVITVP 510
MK+TAEAYLGK V +AV+TVP
Sbjct: 158 MKQTAEAYLGKPVTHAVVTVP 178
Score = 50.8 bits (116), Expect = 1e-07
Identities = 36/99 (36%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Frame = +3
Query: 255 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEXSVMEANLRSR*HIRV---KTNLFPRGS 425
NP NTIFD KRLIGRKF++ T+ D+K +PF V + N R + V K P
Sbjct: 93 NPENTIFDIKRLIGRKFDEKTMAKDIKSFPFHI-VNDKN-RPLVEVNVGGKKKKFTPEEI 150
Query: 426 QFHGAYENEGNCRSLSWQNCAECSNHGSAYFNDSQRQAT 542
+ + + + AYFND+QRQAT
Sbjct: 151 SAMILSKMKQTAEAYLGKPVTHAVVTVPAYFNDAQRQAT 189
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 118 bits (284), Expect = 6e-28
Identities = 72/152 (47%), Positives = 92/152 (60%), Gaps = 11/152 (7%)
Frame = +1
Query: 88 AVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAITPTT 267
A+GIDLGTTYSCV V++ VEII NDQG RTTPS+VAFT+TERL+GDAAKNQ A+ P
Sbjct: 8 AIGIDLGTTYSCVAVWETANVEIIPNDQGARTTPSFVAFTETERLVGDAAKNQAAMNPRN 67
Query: 268 -----------QYSMPNVSSDVSSKMLLCKPT*STGLSRXQ*WRQT*DQGSI*G*RQTFF 414
+Y P D+ K K + G+ + + G ++ F
Sbjct: 68 TVFDAKRLIGRRYEDPETQKDI--KHWPFKVIDNNGIPTI--------EVNYLGEKKQFT 117
Query: 415 PEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 510
+E+S+MVLTKMKE +EA L K V+ AVITVP
Sbjct: 118 AQEISAMVLTKMKEISEAKLNKRVEKAVITVP 149
Score = 58.4 bits (135), Expect = 6e-10
Identities = 22/32 (68%), Positives = 27/32 (84%)
Frame = +3
Query: 255 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFE 350
NP NT+FDAKRLIGR++ED Q D+KHWPF+
Sbjct: 64 NPRNTVFDAKRLIGRRYEDPETQKDIKHWPFK 95
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 95.1 bits (226), Expect = 6e-21
Identities = 64/174 (36%), Positives = 91/174 (52%), Gaps = 12/174 (6%)
Frame = +1
Query: 25 SRVFLRTSNKTD*KYKMAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF 204
SR+ R ++ K+ K P +GIDLGTT SC+ + + ++IAN +G RTTPS VAF
Sbjct: 32 SRMTARWNSNASGNEKV-KGPVIGIDLGTTTSCLAIMEGQTPKVIANAEGTRTTPSVVAF 90
Query: 205 T-DTERLIGDAAKNQVAITPTT-----------QYSMPNVSSDVSSKMLLCKPT*STGLS 348
T D ERL+G +AK Q I P ++ P V D+ P S
Sbjct: 91 TKDGERLVGVSAKRQAVINPENTFFATKRLIGRRFKEPEVQRDIKE-----VPYKIVEHS 145
Query: 349 RXQ*WRQT*DQGSI*G*RQTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 510
W + +G +T+ P ++ +L+KM+ETA YLGK V+NAV+TVP
Sbjct: 146 NGDAWLEA--RG------KTYSPSQIGGFILSKMRETASTYLGKDVKNAVVTVP 191
Score = 47.6 bits (108), Expect = 1e-06
Identities = 36/96 (37%), Positives = 48/96 (50%)
Frame = +3
Query: 255 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEXSVMEANLRSR*HIRVKTNLFPRGSQFH 434
NP NT F KRLIGR+F++ VQ D+K P++ V +N + R KT + F
Sbjct: 109 NPENTFFATKRLIGRRFKEPEVQRDIKEVPYKI-VEHSNGDAWLEARGKTYSPSQIGGFI 167
Query: 435 GAYENEGNCRSLSWQNCAECSNHGSAYFNDSQRQAT 542
+ E L ++ AYFNDSQRQAT
Sbjct: 168 LSKMRETASTYLG-KDVKNAVVTVPAYFNDSQRQAT 202
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 49.2 bits (112), Expect = 4e-07
Identities = 20/59 (33%), Positives = 38/59 (64%)
Frame = +1
Query: 76 AKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 252
++ VGID G + + + V ++ +++I N+ NR+TPS V++ + R +G+AAK+ A
Sbjct: 3 SRTNVVGIDFGNSKTVIAVARNRAIDVIVNEVSNRSTPSLVSYGERSRFLGEAAKSAEA 61
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 39.5 bits (88), Expect = 3e-04
Identities = 16/53 (30%), Positives = 30/53 (56%)
Frame = +1
Query: 91 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQV 249
+GI G S + + GK +++AN++GNR PS +++ + G A+ Q+
Sbjct: 27 IGISFGNQNSSIAFNRDGKTDVLANEEGNRQIPSILSYHGDQEYHGVQARGQL 79
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 29.9 bits (64), Expect = 0.25
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 91 VGIDLGTTYSCVGVFQHG-KVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAITPTT 267
+ ID GT ++ + + G +EI+ R S VAF ER+ G A N P
Sbjct: 25 LAIDYGTEWTKAALIKPGIPLEIVLTKDTRRKEQSAVAFKGNERIFGVDASNLATRFPA- 83
Query: 268 QYSMPNV 288
+S+ NV
Sbjct: 84 -HSIRNV 89
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 28.7 bits (61), Expect = 0.59
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 83 HPQ*ESIWVPRTLALVSSSTGRWRSSPTTRAT 178
HP S W+P LVS+ W +SP+++ T
Sbjct: 283 HPLYSSSWIPTLHDLVSTRCSVWLTSPSSQRT 314
>SPAC22G7.06c |ura1||carbamoyl-phosphate synthase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2244
Score = 26.2 bits (55), Expect = 3.1
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 187 PSYVAFTDTERLIGDAAKNQVAITPTTQYSMPNVSSDVSSKMLLC 321
P +A T ER++ AAK A+ T Y++ ++ D K++ C
Sbjct: 1252 PQDLAPTTIERIVDAAAKIGEALNITGPYNIQFIAKDNEIKVIEC 1296
>SPAC20G4.07c |sts1|erg4|C-24|Schizosaccharomyces pombe|chr
1|||Manual
Length = 453
Score = 25.4 bits (53), Expect = 5.5
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = -2
Query: 109 YPDRFLLRVLLPFCIFNQSCYLFLKKLETSSL 14
YP R+ V FCI YL L + T L
Sbjct: 71 YPTRYAFLVFWSFCIVQAVMYLTLPGVRTQGL 102
>SPAC823.11 |||sphingosine-1-phosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 411
Score = 25.4 bits (53), Expect = 5.5
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = -2
Query: 169 GRWR*SPPSRAGRHQRKSTWYPDRFLLRVLLPFCI 65
G W SP S + H ++++ +F +RVL C+
Sbjct: 276 GTWFASPESLSHLHDNLNSYFLLKFFVRVLFGVCM 310
>SPCC74.09 |mug24||RNA-binding protein, rrm type|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 654
Score = 25.4 bits (53), Expect = 5.5
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +3
Query: 228 RCRQEPGGDNPNNTIF 275
RCRQ+ DN N T+F
Sbjct: 397 RCRQQESKDNGNRTVF 412
>SPAC23H3.08c |bub3||mitotic spindle checkpoint protein
Bub3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 320
Score = 25.0 bits (52), Expect = 7.2
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = -3
Query: 462 GSFLHFRKHHGTDFLGEKGLSSPL 391
GS LH++ + LG+ LSSP+
Sbjct: 35 GSLLHYQISENPELLGKYDLSSPI 58
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 25.0 bits (52), Expect = 7.2
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 199 AFTDTERLIGDAAKNQVAITPTTQYSMPNVSSDV 300
AF D + G AK A P+T+ + N+S V
Sbjct: 155 AFYDASQTFGSTAKVAPAPAPSTKTPLANISKPV 188
>SPAC2F7.03c |pom1||DYRK family protein kinase
Pom1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1087
Score = 25.0 bits (52), Expect = 7.2
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +3
Query: 69 QNGKSTRSRNRSGYHVLLRWCLPARE 146
+NGK T +R +S + W P++E
Sbjct: 477 RNGKKTPTRTKSRMQQFINWFKPSKE 502
>SPBC24C6.03 |||proline-tRNA ligase |Schizosaccharomyces pombe|chr
2|||Manual
Length = 425
Score = 24.6 bits (51), Expect = 9.5
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -3
Query: 258 GYRHLVLGGISDETLGVCERNIRRSGPVALVVGDDLHLPVL 136
GY +++ G + G+CE +R SG + D LH +L
Sbjct: 381 GYPFVIVVGSRFQEEGICEIIVRSSGERYKLDKDSLHQVLL 421
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 24.6 bits (51), Expect = 9.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 94 GIDLGTTYSCVGVFQHGKVEIIANDQGNR 180
G LG TY+ V Q G VE+ D N+
Sbjct: 1279 GCFLGNTYAFASVTQDGSVEVHRLDVNNQ 1307
>SPBC1105.14 |rsv2||transcription factor Rsv2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 637
Score = 24.6 bits (51), Expect = 9.5
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 339 WPFEXSVMEANLRSR*HIRVKTNLFP 416
W F S ++ N +S+ + R TN+FP
Sbjct: 25 WQFNGSQLQQNRKSKMNGRSVTNVFP 50
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,407,007
Number of Sequences: 5004
Number of extensions: 51904
Number of successful extensions: 187
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 185
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 223909422
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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