Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00617
(542 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 170 7e-43
SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 157 7e-39
SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 128 2e-30
SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 128 3e-30
SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 76 2e-14
SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049) 47 1e-05
SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07) 42 4e-04
SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 31 0.61
SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.9
SB_10900| Best HMM Match : I-set (HMM E-Value=0) 28 4.3
SB_7343| Best HMM Match : EGF (HMM E-Value=0) 28 4.3
SB_42630| Best HMM Match : Ets (HMM E-Value=0) 28 5.7
SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_44696| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_24762| Best HMM Match : Astacin (HMM E-Value=0) 27 7.5
SB_55129| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.5
SB_30622| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-14) 27 7.5
SB_19515| Best HMM Match : LRR_1 (HMM E-Value=1.2e-06) 27 9.9
SB_32756| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_31018| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
>SB_45540| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1097
Score = 170 bits (413), Expect = 7e-43
Identities = 90/147 (61%), Positives = 105/147 (71%), Gaps = 1/147 (0%)
Frame = +1
Query: 73 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 252
MAK PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAF+DTERLIGDAAKNQVA
Sbjct: 1 MAKTPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFSDTERLIGDAAKNQVA 60
Query: 253 ITP-TTQYSMPNVSSDVSSKMLLCKPT*STGLSRXQ*WRQT*DQGSI*G*RQTFFPEEVS 429
+ P T + + ++ + + + Q G +++FFPEE+S
Sbjct: 61 MNPENTVFDAKRLIGRKFDDPVVARDMTHWPFHVIREGERPKIQVEFKGEKKSFFPEEIS 120
Query: 430 SMVLTKMKETAEAYLGKTVQNAVITVP 510
SMVLTKMKETAEAYLG V +AV+TVP
Sbjct: 121 SMVLTKMKETAEAYLGAKVTDAVVTVP 147
Score = 64.5 bits (150), Expect = 5e-11
Identities = 38/99 (38%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
Frame = +3
Query: 255 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEXSVMEANLRSR*HIRV---KTNLFPRGS 425
NP NT+FDAKRLIGRKF+D V DM HWPF V+ R + + K + FP
Sbjct: 62 NPENTVFDAKRLIGRKFDDPVVARDMTHWPFH--VIREGERPKIQVEFKGEKKSFFPEEI 119
Query: 426 QFHGAYENEGNCRSLSWQNCAECSNHGSAYFNDSQRQAT 542
+ + + + AYF+DSQRQAT
Sbjct: 120 SSMVLTKMKETAEAYLGAKVTDAVVTVPAYFHDSQRQAT 158
>SB_8490| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 640
Score = 157 bits (380), Expect = 7e-39
Identities = 87/147 (59%), Positives = 99/147 (67%), Gaps = 1/147 (0%)
Frame = +1
Query: 73 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 252
M KAPA+GIDLGTTYSCVGVFQ+GKVEIIANDQGNRTTPSYV FTDTERL+GDAAKNQVA
Sbjct: 1 MGKAPAIGIDLGTTYSCVGVFQNGKVEIIANDQGNRTTPSYVGFTDTERLVGDAAKNQVA 60
Query: 253 ITP-TTQYSMPNVSSDVSSKMLLCKPT*STGLSRXQ*WRQT*DQGSI*G*RQTFFPEEVS 429
+ P T + + + + Q G R+TF EE+S
Sbjct: 61 LNPENTIFDAKRLIGRRYDDATVQSDMKLWPFKIISDNNKPKIQVEYKGERKTFAAEEIS 120
Query: 430 SMVLTKMKETAEAYLGKTVQNAVITVP 510
SMVL KMKETAEAYLG+ V +AVITVP
Sbjct: 121 SMVLGKMKETAEAYLGQKVTSAVITVP 147
Score = 66.9 bits (156), Expect = 1e-11
Identities = 39/99 (39%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Frame = +3
Query: 255 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEXSVMEANLRSR*HIRVKTNLFPRGSQFH 434
NP NTIFDAKRLIGR+++DATVQ+DMK WPF+ ++ N + + + K ++
Sbjct: 62 NPENTIFDAKRLIGRRYDDATVQSDMKLWPFK--IISDNNKPKIQVEYKGERKTFAAEEI 119
Query: 435 GAY---ENEGNCRSLSWQNCAECSNHGSAYFNDSQRQAT 542
+ + + + Q AYFNDSQRQAT
Sbjct: 120 SSMVLGKMKETAEAYLGQKVTSAVITVPAYFNDSQRQAT 158
Score = 32.7 bits (71), Expect = 0.20
Identities = 14/24 (58%), Positives = 17/24 (70%)
Frame = +2
Query: 344 FRGFSDGGKPKIKVAYKGEDKPFS 415
F+ SD KPKI+V YKGE K F+
Sbjct: 92 FKIISDNNKPKIQVEYKGERKTFA 115
>SB_45647| Best HMM Match : HSP70 (HMM E-Value=0)
Length = 1327
Score = 128 bits (310), Expect = 2e-30
Identities = 74/142 (52%), Positives = 91/142 (64%), Gaps = 2/142 (1%)
Frame = +1
Query: 91 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDT-ERLIGDAAKNQVAITP-T 264
+GIDLGTTYSCVGVF++G+VEIIANDQGNR TPSYVAFT+ ERLIGD AKNQ+ P
Sbjct: 704 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTEEGERLIGDGAKNQLTTNPEN 763
Query: 265 TQYSMPNVSSDVSSKMLLCKPT*STGLSRXQ*WRQT*DQGSI*G*RQTFFPEEVSSMVLT 444
T + + + ++ Q + +TF EE+S+MVLT
Sbjct: 764 TVFDAKRLIGRSWDDTSVQNDLKFFPFKVVDKNKKPHVQVKVKDEIKTFAAEEISAMVLT 823
Query: 445 KMKETAEAYLGKTVQNAVITVP 510
KMKETAEAYLGK V +AV+TVP
Sbjct: 824 KMKETAEAYLGKKVTHAVVTVP 845
Score = 60.5 bits (140), Expect = 9e-10
Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Frame = +3
Query: 255 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFEXSVMEANLRSR*HIRVKTNLFPRGSQFH 434
NP NT+FDAKRLIGR ++D +VQ D+K +PF+ V++ N + ++VK + ++
Sbjct: 760 NPENTVFDAKRLIGRSWDDTSVQNDLKFFPFK--VVDKNKKPHVQVKVKDEIKTFAAEEI 817
Query: 435 GAY---ENEGNCRSLSWQNCAECSNHGSAYFNDSQRQAT 542
A + + + + AYFND+QRQAT
Sbjct: 818 SAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQAT 856
>SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 746
Score = 128 bits (309), Expect = 3e-30
Identities = 58/64 (90%), Positives = 61/64 (95%)
Frame = +1
Query: 73 MAKAPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 252
M KAPA+GIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTD ERL+GDAAKNQVA
Sbjct: 1 MTKAPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDEERLVGDAAKNQVA 60
Query: 253 ITPT 264
+ PT
Sbjct: 61 MNPT 64
Score = 58.0 bits (134), Expect = 5e-09
Identities = 24/32 (75%), Positives = 27/32 (84%)
Frame = +3
Query: 255 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFE 350
NP NTIFDAKRLIGR+F+D V+ DMKHW FE
Sbjct: 62 NPTNTIFDAKRLIGRRFDDPGVKDDMKHWSFE 93
Score = 58.0 bits (134), Expect = 5e-09
Identities = 28/39 (71%), Positives = 32/39 (82%)
Frame = +1
Query: 394 G*RQTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 510
G +TFF EE+SSMVL KMKETAEAYLG V +AV+TVP
Sbjct: 134 GETKTFFAEEISSMVLNKMKETAEAYLGCKVTDAVVTVP 172
Score = 47.6 bits (108), Expect = 7e-06
Identities = 22/30 (73%), Positives = 26/30 (86%)
Frame = +1
Query: 421 EVSSMVLTKMKETAEAYLGKTVQNAVITVP 510
++SSMVL KMKETAEAYLG V +AV+TVP
Sbjct: 211 QISSMVLNKMKETAEAYLGCKVTDAVVTVP 240
Score = 31.9 bits (69), Expect = 0.35
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +2
Query: 341 AFRGFSDGGKPKIKVAYKGEDKPF 412
+F ++ G+PK+KV YKGE K F
Sbjct: 91 SFEVVNEAGRPKVKVEYKGETKTF 114
Score = 30.7 bits (66), Expect = 0.80
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +2
Query: 356 SDGGKPKIKVAYKGEDKPF 412
++ G+PK+KV YKGE K F
Sbjct: 121 NEAGRPKVKVEYKGETKTF 139
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3
Query: 510 AYFNDSQRQAT 542
AYFNDSQRQAT
Sbjct: 173 AYFNDSQRQAT 183
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +3
Query: 510 AYFNDSQRQAT 542
AYFNDSQRQAT
Sbjct: 241 AYFNDSQRQAT 251
>SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36)
Length = 437
Score = 75.8 bits (178), Expect = 2e-14
Identities = 53/154 (34%), Positives = 80/154 (51%), Gaps = 10/154 (6%)
Frame = +1
Query: 79 KAPAVGIDLGTTYSCVGVFQ--HGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA 252
K +GIDLGTTYSCVG +Q G+++I +++ ++ PS VAFTD L+G+ A +Q
Sbjct: 30 KPKIIGIDLGTTYSCVGAYQAISGRIDIFSDENDDKVVPSLVAFTDKGVLVGEKALSQAE 89
Query: 253 ITP-TTQYSMPNVSSDVSSKMLLCKPT*STGLSRXQ*WRQT*DQ----GSI*G*RQTF-- 411
I P T Y +K L + + + +R T D+ G + G + F
Sbjct: 90 INPKNTIYDAKRFIGKTFTKQELLE------IGKLYQFRVTTDKRGNAGFLVGKKGNFTV 143
Query: 412 -FPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 510
PEE+ V+ K++ AE L TV AV++VP
Sbjct: 144 ITPEEIGGYVIKKLRTMAERNLTTTVTKAVMSVP 177
Score = 31.5 bits (68), Expect = 0.46
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = +3
Query: 255 NPNNTIFDAKRLIGRKF 305
NP NTI+DAKR IG+ F
Sbjct: 91 NPKNTIYDAKRFIGKTF 107
>SB_15336| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1068
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/52 (42%), Positives = 33/52 (63%)
Frame = +1
Query: 91 VGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ 246
VG D+G + V + G +E +AN+ +R TPS+V+ D +RLIG + KNQ
Sbjct: 4 VGFDVGNQSCYIAVARGGGIETVANEFSDRCTPSFVSLGDKQRLIGTSGKNQ 55
Score = 37.1 bits (82), Expect = 0.009
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +3
Query: 255 NPNNTIFDAKRLIGRKFEDATVQADMKHWPFE 350
N NTI KR IGRKF D VQ ++ H P++
Sbjct: 118 NLKNTISQFKRFIGRKFSDPAVQKEIPHLPYK 149
Score = 36.7 bits (81), Expect = 0.012
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +1
Query: 394 G*RQTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 510
G ++ F PE+V +M+ T++K TAE L V + VI+VP
Sbjct: 166 GKQEVFSPEQVMAMLFTRLKTTAEIALKTKVTDCVISVP 204
>SB_57217| Best HMM Match : Helicase_C (HMM E-Value=0.049)
Length = 179
Score = 46.8 bits (106), Expect = 1e-05
Identities = 20/39 (51%), Positives = 32/39 (82%)
Frame = +1
Query: 394 G*RQTFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 510
G +++F PE++S++VL ++K AEA+LG+ V+ AVITVP
Sbjct: 8 GEKRSFAPEQISAVVLEQLKADAEAFLGQAVKRAVITVP 46
>SB_47391| Best HMM Match : HSP70 (HMM E-Value=2.7e-07)
Length = 592
Score = 41.5 bits (93), Expect = 4e-04
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +1
Query: 142 GKVEIIANDQGNRTTPSYVAFTDTERLI 225
G IIAND G+R TP+ VAF+DTE+LI
Sbjct: 83 GNTTIIANDAGDRVTPAMVAFSDTEKLI 110
>SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16)
Length = 212
Score = 31.1 bits (67), Expect = 0.61
Identities = 15/25 (60%), Positives = 20/25 (80%), Gaps = 1/25 (4%)
Frame = +1
Query: 151 EIIANDQGNRTTPSYVAFT-DTERL 222
++I N +G+RTTPS VAFT + ERL
Sbjct: 7 KVIENAEGSRTTPSVVAFTPEGERL 31
>SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1019
Score = 29.9 bits (64), Expect = 1.4
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 406 TFFPEEVSSMVLTKMKETAEAYLGKTVQNAVITVP 510
TF PEE+ M+L + E + +++ V+TVP
Sbjct: 79 TFTPEELMGMILNHSRFIGEQFADHPIKDVVLTVP 113
>SB_51671| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 665
Score = 29.5 bits (63), Expect = 1.9
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +3
Query: 60 LKIQNGKSTRSRN-RSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCR 236
L++ N + ++ + R GY L R C R + +R + H++L R +RC
Sbjct: 225 LRLVNTRDDKTHDKRPGYRKLSRVC-GGRRPNEPYERTARV-HTILSTETETRFCAKRCA 282
Query: 237 QEPGGDNPNNTIFDA 281
G +P NT F+A
Sbjct: 283 GTASGMDPKNTPFNA 297
>SB_10900| Best HMM Match : I-set (HMM E-Value=0)
Length = 1642
Score = 28.3 bits (60), Expect = 4.3
Identities = 15/44 (34%), Positives = 21/44 (47%)
Frame = -2
Query: 379 DLRFASITEXSKGQCFMSACTVASSNLRPMRRLASNIVLLGLSP 248
DL FAS+T +G AC A + P R + N++ L P
Sbjct: 623 DLSFASVTRQDRGMYACQACNAAGCTMTP--RASLNVLYNPLFP 664
>SB_7343| Best HMM Match : EGF (HMM E-Value=0)
Length = 1233
Score = 28.3 bits (60), Expect = 4.3
Identities = 17/72 (23%), Positives = 30/72 (41%)
Frame = +1
Query: 112 TYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAITPTTQYSMPNVS 291
T++ + H I+ N G +TP + T A + + +TPT V+
Sbjct: 559 THTTTSITLHPSSAILDNSLGPASTPRTTISSTTHVSSTPIASSSMVMTPTAINPSATVT 618
Query: 292 SDVSSKMLLCKP 327
+ V S ++ KP
Sbjct: 619 TTVPSTSVVVKP 630
>SB_42630| Best HMM Match : Ets (HMM E-Value=0)
Length = 631
Score = 27.9 bits (59), Expect = 5.7
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +2
Query: 101 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 244
IW P+ L++S R+S + PLR L P VSS +P T
Sbjct: 42 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 89
>SB_34715| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 977
Score = 27.9 bits (59), Expect = 5.7
Identities = 17/48 (35%), Positives = 23/48 (47%)
Frame = +2
Query: 101 IWVPRTLALVSSSTGRWRSSPTTRATGPLRLMLRSQTPSVSSEMPPRT 244
IW P+ L++S R+S + PLR L P VSS +P T
Sbjct: 388 IWPPKKQHLMASYPSTSRASASRSHLFPLRTGLPPVPPLVSSPLPSPT 435
>SB_44696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 695
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = +3
Query: 231 CRQEPGGDNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEXS 356
C Q + N TI K L+ + ED ++HWP + S
Sbjct: 389 CLQICANSDGNLTITPVKTLVFKAAEDTKPSHHLRHWPQQSS 430
>SB_24762| Best HMM Match : Astacin (HMM E-Value=0)
Length = 733
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -3
Query: 540 WLVFESH*STRNRDYCILHSFAKIS 466
WL F + S+ + D C+LHS A ++
Sbjct: 419 WLDFSRYYSSASSDICVLHSIAHLA 443
>SB_55129| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 27.5 bits (58), Expect = 7.5
Identities = 22/69 (31%), Positives = 32/69 (46%)
Frame = -1
Query: 320 HSSIFELTSDETFGIEYCVVGVIATWFLAASPMRRSVSVNAT*DGVVLLPWSLAMISTFP 141
+S + L + T +EY +GV+ATW R + V AT L W L +++T
Sbjct: 23 YSRLGVLATWSTGDLEYWRLGVLATWSTGDLEYSR-LGVLATWSTGDLEYWRLGVLAT-- 79
Query: 140 CWKTPTQEY 114
W T EY
Sbjct: 80 -WSTGDLEY 87
>SB_30622| Best HMM Match : 7tm_1 (HMM E-Value=9.5e-14)
Length = 856
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = -1
Query: 269 CVVGVIATWFLAASPMRRSVSVNAT*DGVVLLPWSLAMISTFPCWKTPTQEYVVPRSIPT 90
C++ I WF P+R S + VV+ S+ ++ F C P + P +IP+
Sbjct: 107 CLLLTIERWFAVVQPLRYQASFSKR--RVVVSLISVYCVACFLCCTLPFEVSFSPENIPS 164
>SB_19515| Best HMM Match : LRR_1 (HMM E-Value=1.2e-06)
Length = 470
Score = 27.1 bits (57), Expect = 9.9
Identities = 11/44 (25%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
Frame = +3
Query: 399 KTNLFPRGSQFHGAYENEGNCRSLSWQNCA-ECSNHGSAYFNDS 527
KTN+ G+++ G NC+ W C + G+ Y ++
Sbjct: 403 KTNIGDEGAKYIGEALGHENCKLTKWDMCGNNIGDEGAKYIGEA 446
>SB_32756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 386
Score = 27.1 bits (57), Expect = 9.9
Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Frame = +3
Query: 216 ASHRRCRQEPGG---DNPNNTIFDAKRLIGRKFEDATVQADMKHWPFEXSVMEANL 374
A+ R+ ++EPG N IF+A+R +FE V + H P+E ++ A++
Sbjct: 203 ANGRKSKKEPGAAVLSNHKLEIFNAERQAIFEFELKRVNEIVIHTPWEMTINRASI 258
>SB_31018| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1066
Score = 27.1 bits (57), Expect = 9.9
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +3
Query: 60 LKIQNGKSTRSRN-RSGYHVLLRWCLPAREGGDHRQRPGQQDHSVLCCVHRHRASHRRCR 236
L++ N + ++ R GY L R C R + +R + H++L R +RC
Sbjct: 661 LRLVNTRDDKTHGKRPGYRKLSRVC-GGRRPNEPYERTARV-HTILSTDTETRFCEKRCA 718
Query: 237 QEPGGDNPNNTIFDA 281
G +P N F+A
Sbjct: 719 GTASGMDPKNIPFNA 733
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,893,695
Number of Sequences: 59808
Number of extensions: 440846
Number of successful extensions: 1342
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1143
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1336
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1239956166
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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