Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00616
(598 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 24 0.98
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 23 2.3
AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 23 2.3
AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 23 2.3
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 22 4.0
AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly pro... 22 4.0
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 22 4.0
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 22 4.0
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 22 5.3
AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 22 5.3
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 22 5.3
AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 22 5.3
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 21 6.9
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 21 6.9
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 21 6.9
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 21 6.9
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 21 6.9
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 21 6.9
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 6.9
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 24.2 bits (50), Expect = 0.98
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -3
Query: 530 SPQTSKRRASETFASLPRKPYLTITVLSIQKIND 429
+P+ + + F P Y +TVLSI IN+
Sbjct: 13 NPKLYDKHRAPKFLGQPTIVYFHVTVLSIDSINE 46
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 23.0 bits (47), Expect = 2.3
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -2
Query: 183 CWNRHQAFER 154
CWN HQ+ +R
Sbjct: 327 CWNEHQSLDR 336
>AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly
protein MRJP5 protein.
Length = 598
Score = 23.0 bits (47), Expect = 2.3
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = -2
Query: 183 CWNRHQAFERD 151
CWN HQ +R+
Sbjct: 330 CWNEHQPLQRE 340
>AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly
protein MRJP2 protein.
Length = 452
Score = 23.0 bits (47), Expect = 2.3
Identities = 6/10 (60%), Positives = 8/10 (80%)
Frame = -2
Query: 183 CWNRHQAFER 154
CWN HQ+ +R
Sbjct: 327 CWNEHQSLQR 336
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 22.2 bits (45), Expect = 4.0
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -2
Query: 183 CWNRHQAFER 154
CWN H+ ER
Sbjct: 329 CWNEHRTLER 338
>AY313893-1|AAQ82184.1| 437|Apis mellifera major royal jelly
protein MRJP6 protein.
Length = 437
Score = 22.2 bits (45), Expect = 4.0
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -2
Query: 183 CWNRHQAFER 154
CWN HQ +R
Sbjct: 330 CWNEHQPLQR 339
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 22.2 bits (45), Expect = 4.0
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -2
Query: 183 CWNRHQAFER 154
CWN H+ ER
Sbjct: 329 CWNEHRTLER 338
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 22.2 bits (45), Expect = 4.0
Identities = 6/10 (60%), Positives = 7/10 (70%)
Frame = -2
Query: 183 CWNRHQAFER 154
CWN H+ ER
Sbjct: 329 CWNEHRTLER 338
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.8 bits (44), Expect = 5.3
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -3
Query: 494 FASLPRKPYLTITVLSIQKIND 429
FASL + PY L+ + +ND
Sbjct: 466 FASLKKSPYFKEANLNTRMLND 487
>AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 21.8 bits (44), Expect = 5.3
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +3
Query: 141 LITDPAQMPDVYSSTPGGTIYSTTPG 218
++TDP + P+VY G Y G
Sbjct: 449 VLTDPKKNPNVYKVETVGDKYMAVSG 474
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 21.8 bits (44), Expect = 5.3
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -3
Query: 494 FASLPRKPYLTITVLSIQKIND 429
FASL + PY L+ + +ND
Sbjct: 466 FASLKKSPYFKEANLNTRMLND 487
>AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase
beta 1 subunit protein.
Length = 603
Score = 21.8 bits (44), Expect = 5.3
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +3
Query: 141 LITDPAQMPDVYSSTPGGTIYSTTPG 218
++TDP + P+VY G Y G
Sbjct: 449 VLTDPKKNPNVYKVETVGDKYMAVSG 474
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 6.9
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = -2
Query: 495 IRKLAAQAVFDNNSFKYSEN 436
I L+ + + +NN++KY+ N
Sbjct: 82 ISSLSNKTIHNNNNYKYNYN 101
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 6.9
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = -2
Query: 495 IRKLAAQAVFDNNSFKYSEN 436
I L+ + + +NN++KY+ N
Sbjct: 82 ISSLSNKTIHNNNNYKYNYN 101
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 21.4 bits (43), Expect = 6.9
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = -2
Query: 495 IRKLAAQAVFDNNSFKYSEN 436
I L+ + + +NN++KY+ N
Sbjct: 82 ISSLSNRTIHNNNNYKYNYN 101
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 6.9
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = -2
Query: 495 IRKLAAQAVFDNNSFKYSEN 436
I L+ + + +NN++KY+ N
Sbjct: 82 ISSLSNKTIHNNNNYKYNYN 101
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 6.9
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = -2
Query: 495 IRKLAAQAVFDNNSFKYSEN 436
I L+ + + +NN++KY+ N
Sbjct: 82 ISSLSNKTIHNNNNYKYNYN 101
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 21.4 bits (43), Expect = 6.9
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = -2
Query: 495 IRKLAAQAVFDNNSFKYSEN 436
I L+ + + +NN++KY+ N
Sbjct: 82 ISSLSNKTIHNNNNYKYNYN 101
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.4 bits (43), Expect = 6.9
Identities = 7/20 (35%), Positives = 14/20 (70%)
Frame = -2
Query: 495 IRKLAAQAVFDNNSFKYSEN 436
I L+ + + +NN++KY+ N
Sbjct: 315 ISSLSNKTIHNNNNYKYNYN 334
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,749
Number of Sequences: 438
Number of extensions: 3335
Number of successful extensions: 20
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17482179
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -